EWM22727.1, cds7947 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|585103317|gb|EWM22727.1| (phosphatidylinositol kinase [Nannochloropsis gaditana]) HSP 1 Score: 525.398 bits (1352), Expect = 0.000e+0 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
Query: 1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEGGERRSERAKAWGEEEKLQAVVEALLGRDSEEGRRR 269
MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEGGERRSERAKAWGEEEKLQAVVEALLGRDSEEGRRR
Sbjct: 1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEGGERRSERAKAWGEEEKLQAVVEALLGRDSEEGRRR 269
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|585103316|gb|EWM22726.1| (phosphatidylinositol kinase [Nannochloropsis gaditana]) HSP 1 Score: 460.685 bits (1184), Expect = 1.244e-162 Identity = 235/240 (97.92%), Postives = 236/240 (98.33%), Query Frame = 0
Query: 1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEGGERRSE 240
MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIE R+E
Sbjct: 7 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEDRGLRTE 246
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|298709373|emb|CBJ31307.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.8702 bits (185), Expect = 5.540e-12 Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVV-----EEKEEG-----WELVRATR 98
M N+G FP ++V V G M GP +GV V + G EF+V++PLTTP + RY+GYW+L E + GHR+W DV+V + +EG W+LV R
Sbjct: 322 MRNDGPVTFPSGCKIVPVGGDLMAGPEDGVAVEQRGPGEEFHVSVPLTTPPLSGRYIGYWRLRT----AEGQKFGHRVWADVLVTGGTADLVDEGTVDGDWDLVNMQR 425
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|470250980|ref|XP_004358587.1| (ZZ-type zinc finger-containing protein [Dictyostelium fasciculatum] >gi|328872370|gb|EGG20737.1| ZZ-type zinc finger-containing protein [Dictyostelium fasciculatum]) HSP 1 Score: 63.5438 bits (153), Expect = 7.343e-8 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 0
Query: 1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEE 89
+ N+G++++P N L FV G RM P +GV V G + +VA+ L P+ P RY+GYW+L P G G R++ DV VE K+E
Sbjct: 351 LRNDGNQQWPENTTLSFVSGDRMSSP-DGVTVEPALPGNDVDVAINLVAPSTPGRYIGYWKL--FTPEGN--AYGQRLFADVYVEGKKE 434
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|1160571383|ref|XP_020434705.1| (ZZ-type zinc finger-containing protein [Polysphondylium pallidum PN500] >gi|281208412|gb|EFA82588.1| ZZ-type zinc finger-containing protein [Polysphondylium pallidum PN500]) HSP 1 Score: 62.3882 bits (150), Expect = 2.156e-7 Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = 0
Query: 1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEE 89
+ N+G E +P N+ LV+ G R+ P +G+ V V G + +V L LTTP+ P RY+GYW+L P G + G R+++D+ V E ++
Sbjct: 317 IRNDGREAWPENSTLVWSSGDRLGSP-DGITVDPVLPGQDIDVGLNLTTPSAPGRYIGYWKLVT--PEG--LGFGQRLYVDIFVVEDDK 400
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|695055562|ref|XP_009415967.1| (PREDICTED: protein NBR1 homolog [Musa acuminata subsp. malaccensis]) HSP 1 Score: 61.6178 bits (148), Expect = 4.098e-7 Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 0
Query: 1 MANNGSERFPPNARLVFVHGHR--------MEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVE 85
M NNGS R+P RLV+V G R +E P +G PV E + ++A+ LT+P +P RY YW+L + P G++ G R+W+ + V+
Sbjct: 552 MQNNGSTRWPYGTRLVWVGGDRFANRDSVLLEIPADGFPVNE-----KVDIAVDLTSPAMPGRYFSYWRLAS--PSGQK--FGQRVWVLIQVD 635 The following BLAST results are available for this feature:
BLAST of EWM22727.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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