EWM22727.1, cds7947 (CDS) Nannochloropsis gaditana

Overview
NameEWM22727.1
Unique Namecds7947
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:251753..251877 +
Alignment locationKK037247.1:252090..252774 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22727.1
Productphosphatidylinositol kinase
Orig transcript idgnl|cribi|Naga_101049g1.10512.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:251753..251877 +
KK037247.1supercontigKK037247.1:252090..252774 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Homology
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|585103317|gb|EWM22727.1| (phosphatidylinositol kinase [Nannochloropsis gaditana])

HSP 1 Score: 525.398 bits (1352), Expect = 0.000e+0
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
Query:    1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEGGERRSERAKAWGEEEKLQAVVEALLGRDSEEGRRR 269
            MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEGGERRSERAKAWGEEEKLQAVVEALLGRDSEEGRRR
Sbjct:    1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEGGERRSERAKAWGEEEKLQAVVEALLGRDSEEGRRR 269          
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|585103316|gb|EWM22726.1| (phosphatidylinositol kinase [Nannochloropsis gaditana])

HSP 1 Score: 460.685 bits (1184), Expect = 1.244e-162
Identity = 235/240 (97.92%), Postives = 236/240 (98.33%), Query Frame = 0
Query:    1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEGGERRSE 240
            MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIE    R+E
Sbjct:    7 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEEGWELVRATREEGGQGEREEGARAMGGEEGEEMGEDDGDEEEKVEDDGEDESLLETAAAATLASSFPSPLASSLPGSQDWSKWTPQLELLAAMGFETRLDECVVLMEKIWKEEGEEGGVGGAAPASSSSGGAPPCSPSSDPSLIEDRGLRTE 246          
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|298709373|emb|CBJ31307.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 75.8702 bits (185), Expect = 5.540e-12
Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVV-----EEKEEG-----WELVRATR 98
            M N+G   FP   ++V V G  M GP +GV V +   G EF+V++PLTTP +  RY+GYW+L       E  + GHR+W DV+V     +  +EG     W+LV   R
Sbjct:  322 MRNDGPVTFPSGCKIVPVGGDLMAGPEDGVAVEQRGPGEEFHVSVPLTTPPLSGRYIGYWRLRT----AEGQKFGHRVWADVLVTGGTADLVDEGTVDGDWDLVNMQR 425          
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|470250980|ref|XP_004358587.1| (ZZ-type zinc finger-containing protein [Dictyostelium fasciculatum] >gi|328872370|gb|EGG20737.1| ZZ-type zinc finger-containing protein [Dictyostelium fasciculatum])

HSP 1 Score: 63.5438 bits (153), Expect = 7.343e-8
Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEE 89
            + N+G++++P N  L FV G RM  P +GV V     G + +VA+ L  P+ P RY+GYW+L    P G     G R++ DV VE K+E
Sbjct:  351 LRNDGNQQWPENTTLSFVSGDRMSSP-DGVTVEPALPGNDVDVAINLVAPSTPGRYIGYWKL--FTPEGN--AYGQRLFADVYVEGKKE 434          
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|1160571383|ref|XP_020434705.1| (ZZ-type zinc finger-containing protein [Polysphondylium pallidum PN500] >gi|281208412|gb|EFA82588.1| ZZ-type zinc finger-containing protein [Polysphondylium pallidum PN500])

HSP 1 Score: 62.3882 bits (150), Expect = 2.156e-7
Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = 0
Query:    1 MANNGSERFPPNARLVFVHGHRMEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVEEKEE 89
            + N+G E +P N+ LV+  G R+  P +G+ V  V  G + +V L LTTP+ P RY+GYW+L    P G  +  G R+++D+ V E ++
Sbjct:  317 IRNDGREAWPENSTLVWSSGDRLGSP-DGITVDPVLPGQDIDVGLNLTTPSAPGRYIGYWKLVT--PEG--LGFGQRLYVDIFVVEDDK 400          
BLAST of EWM22727.1 vs. NCBI_GenBank
Match: gi|695055562|ref|XP_009415967.1| (PREDICTED: protein NBR1 homolog [Musa acuminata subsp. malaccensis])

HSP 1 Score: 61.6178 bits (148), Expect = 4.098e-7
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 0
Query:    1 MANNGSERFPPNARLVFVHGHR--------MEGPREGVPVGEVEAGAEFNVALPLTTPTVPDRYVGYWQLEAHGPRGERVELGHRIWIDVVVE 85
            M NNGS R+P   RLV+V G R        +E P +G PV E     + ++A+ LT+P +P RY  YW+L +  P G++   G R+W+ + V+
Sbjct:  552 MQNNGSTRWPYGTRLVWVGGDRFANRDSVLLEIPADGFPVNE-----KVDIAVDLTSPAMPGRYFSYWRLAS--PSGQK--FGQRVWVLIQVD 635          
The following BLAST results are available for this feature:
BLAST of EWM22727.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 6
Match NameE-valueIdentityDescription
gi|585103317|gb|EWM22727.1|0.000e+0100.00phosphatidylinositol kinase [Nannochloropsis gadit... [more]
gi|585103316|gb|EWM22726.1|1.244e-16297.92phosphatidylinositol kinase [Nannochloropsis gadit... [more]
gi|298709373|emb|CBJ31307.1|5.540e-1239.81conserved unknown protein [Ectocarpus siliculosus][more]
gi|470250980|ref|XP_004358587.1|7.343e-840.45ZZ-type zinc finger-containing protein [Dictyostel... [more]
gi|1160571383|ref|XP_020434705.1|2.156e-738.20ZZ-type zinc finger-containing protein [Polysphond... [more]
gi|695055562|ref|XP_009415967.1|4.098e-737.63PREDICTED: protein NBR1 homolog [Musa acuminata su... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7969rna7969Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications