EWM22730.1, cds7943 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|585103321|gb|EWM22729.1| (hypothetical protein Naga_100561g2 [Nannochloropsis gaditana] >gi|585103322|gb|EWM22730.1| hypothetical protein Naga_100561g2 [Nannochloropsis gaditana]) HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
Query: 1 MPLFVSSRYLLSIATAALCLTSSFSFAKIVVEDNFIDETTRDALLAQLPSEMHRFKHTVDLPGKVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGGGDRNRFIIQARAHPLFARAGKTVRVTADLVVLDDQPGRERAVRALPTADIVFACSLDPFFNFQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK 343
MPLFVSSRYLLSIATAALCLTSSFSFAKIVVEDNFIDETTRDALLAQLPSEMHRFKHTVDLPGKVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGGGDRNRFIIQARAHPLFARAGKTVRVTADLVVLDDQPGRERAVRALPTADIVFACSLDPFFNFQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK
Sbjct: 1 MPLFVSSRYLLSIATAALCLTSSFSFAKIVVEDNFIDETTRDALLAQLPSEMHRFKHTVDLPGKVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGGGDRNRFIIQARAHPLFARAGKTVRVTADLVVLDDQPGRERAVRALPTADIVFACSLDPFFNFQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK 343
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|585103332|gb|EWM22739.1| (hypothetical protein Naga_100209g9 [Nannochloropsis gaditana]) HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0 Identity = 328/344 (95.35%), Postives = 332/344 (96.51%), Query Frame = 0
Query: 1 MPLFVSSRYLLSIATAALCLTSSFSFAKIVVEDNFIDETTRDALLAQLPSEMHRFKHTVDLPGKVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGGGDRNRFIIQARAHPLFARAGKTVRVTADLVVLDDQP-GRERAVRALPTADIVFACSLDPFFNFQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK 343
MPLFVSSRYLLSIATA LCLTSSFS AKIVVEDNFIDETTR+ALLAQLPSEMHRFKHTVD+PG VYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSI G D NRFIIQARAH LFARAGKTVRVTADLVVLDDQP GR+RAVRAL T DIVFACSLDPFFNFQSLT GNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGT+IPLYLSVP EWEQELGVVVK
Sbjct: 1 MPLFVSSRYLLSIATAVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSI-GDDPNRFIIQARAHHLFARAGKTVRVTADLVVLDDQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|553178404|ref|XP_005852549.1| (hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526] >gi|422295984|gb|EKU23283.1| hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 75.0998 bits (183), Expect = 1.368e-12 Identity = 47/122 (38.52%), Postives = 63/122 (51.64%), Query Frame = 0
Query: 227 PTADIVFACSLDPFFNFQS----LTAGNKTSK-HRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK 343
P D++ +C L Q L G+ T R D +SF R K+ PNTWRPK+ Y V D L WTLP G K YKI +R+G+ V SGT +PL + V ++W ++L V K
Sbjct: 57 PVEDVIVSCLLGGNATVQGHATRLLQGHSTKVLKRARLGDEALSFQRGKLRPNTWRPKLRY--VKTNDELAWTLPVGGIVFGKTYKIKWRIRLGRGVASGTELPLTVRV-ADWMEDLVVTAK 175
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|585101591|gb|EWM21377.1| (hypothetical protein Naga_100424g5 [Nannochloropsis gaditana]) HSP 1 Score: 70.8626 bits (172), Expect = 1.284e-11 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 0
Query: 261 DVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK 343
D +SF R + PNTW+PK+ Y D D L WTLP+ G L K YKI + +G V SGT +PL +SV +EW ++L V VK
Sbjct: 41 DEALSFKRGVLKPNTWKPKLRYVKTD--DELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSV-AEWMEDLVVSVK 120
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|585111994|gb|EWM29458.1| (hypothetical protein Naga_100083g24 [Nannochloropsis gaditana]) HSP 1 Score: 70.0922 bits (170), Expect = 1.554e-10 Identity = 47/144 (32.64%), Postives = 69/144 (47.92%), Query Frame = 0
Query: 195 PLFARAGKTVRVTADLVVLDDQPGRERAVRALPTADIVF------ACSLDPFFNFQSLTAGNKTS----KHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYL 328
P+ +AG V +T + L+ R R +R L AD + + + + + L+ NKT K K G + RS+I PNTWRPK+ I G T ++P+ G L+ YKI RIGK PSG++I Y+
Sbjct: 40 PISVKAGGRVTLTTSFLFLET---RRRQLRELAFADEILYWATPNEADIPAYGDLEELSNKNKTKTSHPKSSKHGNSTDVRLVRSRIMPNTWRPKLRSNIT--GSTNFMSIPTTGLVALEDYKIINKFRIGKRYPSGSVITFYV 178
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|585103543|gb|EWM22885.1| (hypothetical protein Naga_100160g3 [Nannochloropsis gaditana]) HSP 1 Score: 70.0922 bits (170), Expect = 1.910e-10 Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 0
Query: 233 FACSLDPFFN---FQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSV 330
+ +++P N +++ TA NKTSK DV ++ +++I+PNTWRPK G + + LP DG L K+YKIT +RIGK +PSGT +P + V
Sbjct: 80 YGITVEPLVNSLSWKNHTAKNKTSKF---AGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFL-PLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGV 176
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|553176372|ref|XP_005852373.1| (hypothetical protein NGA_0690000 [Nannochloropsis gaditana CCMP526] >gi|422296155|gb|EKU23454.1| hypothetical protein NGA_0690000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 67.3958 bits (163), Expect = 2.605e-10 Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = 0
Query: 230 DIVFAC-------SLDPFFNFQSLTAGNKTS--KHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK 343
D+V +C +L N L G+ T K + G D +SF R K+ PNTWRPK+ Y + + L WTLP G K YKI + +G++V SGT +PL + V ++W ++L V K
Sbjct: 3 DVVVSCLLGGNTTTLHVQGNATRLLQGHSTKVLKRARLG-DEALSFKRGKLRPNTWRPKLRY--IKTNNELAWTLPVGGIVFGKTYKIKWRIHMGRSVASGTELPLTVRV-ADWMKDLVVTAK 121
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|553183816|ref|XP_005853972.1| (hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526] >gi|422295089|gb|EKU22388.1| hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.1662 bits (165), Expect = 4.717e-10 Identity = 37/104 (35.58%), Postives = 63/104 (60.58%), Query Frame = 0
Query: 230 DIVFACSLDPF---FNFQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSV 330
++++ +++P + ++ TA NKTSK DV ++ +++I+PNTWRPKI G + + +P +G L K+YK+T +RIGK +PSGT +P + V
Sbjct: 57 EVLYGITVEPLVSPLSSKNHTAKNKTSKF---AGDVDVTLRKTRISPNTWRPKIFANGTGTGTSFL-PMPLNGLVLSKQYKVTSKIRIGKGIPSGTYVPFQIFV 156
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|553184967|ref|XP_005854180.1| (hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526] >gi|553192556|ref|XP_005855596.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422293459|gb|EKU20759.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422294881|gb|EKU22181.1| hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 63.1586 bits (152), Expect = 1.059e-8 Identity = 37/87 (42.53%), Postives = 48/87 (55.17%), Query Frame = 0
Query: 244 QSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSV 330
+S K+SKH G + RS+I PNTWRPK+ I G T ++P+ G +LK YKI RIGK PSGT+I Y+ V
Sbjct: 34 KSCIGHPKSSKH---GNSTDVRLVRSRIIPNTWRPKLRSNI--TGSTNFMSVPTTGLVVLKDYKIINKFRIGKRYPSGTVISFYVFV 115
BLAST of EWM22730.1 vs. NCBI_GenBank
Match: gi|585102369|gb|EWM21985.1| (hypothetical protein Naga_100745g2 [Nannochloropsis gaditana]) HSP 1 Score: 65.0846 bits (157), Expect = 3.743e-8 Identity = 45/106 (42.45%), Postives = 58/106 (54.72%), Query Frame = 0
Query: 243 FQSLTAGNKTSK---HRKDGTDVG---ISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVV 342
F SLT G + S + +G ++F RS + PNTWRPK Y IV G+ +VW LP DG L K YKI +R+ + V SGT +P L V S Q+L V V
Sbjct: 236 FVSLTIGQEASASGFRNRTQKAIGARELTFKRSTLRPNTWRPKPRYSIV--GNEVVWQLPFDGFVLKKTYKIKWKLRVDRGVTSGTQLPFILRVGSNM-QDLMVTV 338 The following BLAST results are available for this feature:
BLAST of EWM22730.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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