EWM22740.1, cds7940 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|585103333|gb|EWM22740.1| (Mitogen-activated protein kinase kinase 1 interacting [Nannochloropsis gaditana]) HSP 1 Score: 411.764 bits (1057), Expect = 2.465e-145 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
Query: 1 MRKELTSVDPVVQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVGYATIPSAATVLASTSEGKPGQEEQRHHEEGHDSSVAVPLGGEGGREAGLVPPLPLQLMNVGMILDSQAEFREALAPLRGVVEASERESTTSGRSL 206
MRKELTSVDPVVQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVGYATIPSAATVLASTSEGKPGQEEQRHHEEGHDSSVAVPLGGEGGREAGLVPPLPLQLMNVGMILDSQAEFREALAPLRGVVEASERESTTSGRSL
Sbjct: 1 MRKELTSVDPVVQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVGYATIPSAATVLASTSEGKPGQEEQRHHEEGHDSSVAVPLGGEGGREAGLVPPLPLQLMNVGMILDSQAEFREALAPLRGVVEASERESTTSGRSL 206
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|923124784|ref|XP_013755860.1| (mitogen-activated protein kinase scaffold protein 1 [Thecamonas trahens ATCC 50062] >gi|906558488|gb|KNC51731.1| mitogen-activated protein kinase scaffold protein 1 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 71.2478 bits (173), Expect = 2.550e-12 Identity = 45/124 (36.29%), Postives = 70/124 (56.45%), Query Frame = 0
Query: 16 FDQLLLRHPDVEAILLSTADGIPLMRAVRPTSP------CFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVGYATIPSAATVLASTSEGKPGQE 133
F++LL R +E+ILL+ + G L++ RP + + + + +E +S VF +A DQA KLG G +S++S Y+ +VQ+N+APLVLSF+G + +A VLA E G E
Sbjct: 8 FEELLTRVHGLESILLTDSQGAVLLQVTRPVAEDKVEGAADGAEADAGEATVLEPAMSGVFVMACDQAAKLGIGATSSMISYYENNVIVQLNVAPLVLSFIGSHQV-NAGAVLAMAPELYAGLE 130
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|1183356089|gb|ORX83733.1| (mitogen-activated protein kinase [Anaeromyces robustus]) HSP 1 Score: 62.003 bits (149), Expect = 6.108e-9 Identity = 31/100 (31.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query: 12 VQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVG 111
+Q+ FD ++ + ++AI++S DG+ L ++ T+P F SL+ I+S +S F++A DQ K+G SI + Y+ ++Q N PL+++F+
Sbjct: 3 IQKEFDNIISKTQGLQAIIVSDKDGVIL---IQSTNPAF-------SLNNIDSSLSTSFAVACDQIGKIGLSKNKSITTFYKYHQMIQFNYNPLIITFIA 92
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|1183399726|gb|ORY24427.1| (Roadblock/LC7 domain-containing protein [Neocallimastix californiae]) HSP 1 Score: 61.6178 bits (148), Expect = 7.359e-9 Identity = 31/100 (31.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query: 12 VQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVG 111
+Q+ FD ++ + ++AI++S DG+ L ++ T+P F SL+ I+S +S F++A DQ K+G SI + Y+ ++Q N PL+++F+
Sbjct: 3 IQKDFDSIISKTQGLQAIIVSDKDGVVL---IQSTNPAF-------SLNNIDSSLSTSFAVACDQIGKIGLSKNKSITTFYKYHQIIQFNYNPLIITFIA 92
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|1183324007|gb|ORX53787.1| (Roadblock/LC7 domain-containing protein [Piromyces finnis]) HSP 1 Score: 59.3066 bits (142), Expect = 5.555e-8 Identity = 29/100 (29.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query: 12 VQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVG 111
+Q+ FD ++ + ++AI++S DG+ L ++ T+P F +L +I+S ++ F++A DQ K+G SI + Y+ ++Q N PL+++F+
Sbjct: 3 IQKEFDSIISKTQGLQAIIVSDKDGVIL---IQSTNPAF-------TLDSIDSSLATSFAVACDQIGKIGLSKNKSITTFYKYHQIIQFNYHPLIITFIA 92
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|909553375|ref|XP_013148117.1| (PREDICTED: ragulator complex protein LAMTOR3 homolog [Papilio polytes] >gi|910351850|ref|XP_013179857.1| PREDICTED: ragulator complex protein LAMTOR3 homolog [Papilio xuthus] >gi|930657516|gb|KPI99820.1| Ragulator complex protein LAMTOR3-like [Papilio xuthus]) HSP 1 Score: 59.3066 bits (142), Expect = 6.110e-8 Identity = 33/100 (33.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query: 12 VQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVG 111
+++ + LL + + IL++ DG+P++RAV +P P + + +ST F +A DQA KLG G +I+S+Y ++Q+N PLV++F+G
Sbjct: 5 LRKYLNHLLEKVNGLHCILITDRDGVPVVRAVTERAP--PLALRPNFIST--------FGMATDQASKLGLGRNKTIISMYSSYQVIQMNKLPLVITFIG 94
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|512898599|ref|XP_004924436.1| (ragulator complex protein LAMTOR3 homolog [Bombyx mori]) HSP 1 Score: 58.5362 bits (140), Expect = 1.124e-7 Identity = 34/100 (34.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query: 12 VQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVG 111
+++ + LL + + IL++ DG+PL+RAV +P P + + +ST F +A DQA KLG G +I+S+Y +VQ++ PLV++F+G
Sbjct: 5 LRKYLNHLLEKVNGLHCILITDRDGVPLVRAVTERAP--PLALRPNFIST--------FGMATDQASKLGLGRNKTIISMYSSYQVVQMSKLPLVITFIG 94
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|1199383055|ref|XP_021186131.1| (ragulator complex protein LAMTOR3 homolog [Helicoverpa armigera]) HSP 1 Score: 58.151 bits (139), Expect = 1.196e-7 Identity = 31/100 (31.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query: 12 VQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLSTIESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVG 111
+++ + LL + + IL++ DG+PL+RAV +P + + F +A DQA KLG G +I+S+Y ++Q+N PLV++F+G
Sbjct: 5 LRKYLNHLLEKVNGLHCILITDRDGVPLVRAVTERAPQL----------ALRPNFISTFGMATDQASKLGLGRNKTIISMYSSYQVIQMNKLPLVITFIG 94
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|675204867|ref|XP_008911318.1| (hypothetical protein PPTG_15761 [Phytophthora parasitica INRA-310] >gi|566015046|gb|ETI37957.1| hypothetical protein F443_16215 [Phytophthora parasitica P1569] >gi|567952469|gb|ETK78144.1| hypothetical protein L915_15776 [Phytophthora parasitica] >gi|567981133|gb|ETL31579.1| hypothetical protein L916_15667 [Phytophthora parasitica] >gi|568010637|gb|ETL84822.1| hypothetical protein L917_15478 [Phytophthora parasitica] >gi|568040525|gb|ETM37977.1| hypothetical protein L914_15623 [Phytophthora parasitica] >gi|568088688|gb|ETN03545.1| hypothetical protein PPTG_15761 [Phytophthora parasitica INRA-310] >gi|570318762|gb|ETO66710.1| hypothetical protein F444_16199 [Phytophthora parasitica P1976] >gi|570942587|gb|ETP07844.1| hypothetical protein F441_16044 [Phytophthora parasitica CJ01A1] >gi|570973175|gb|ETP35879.1| hypothetical protein F442_16067 [Phytophthora parasitica P10297]) HSP 1 Score: 58.5362 bits (140), Expect = 1.277e-7 Identity = 38/124 (30.65%), Postives = 66/124 (53.23%), Query Frame = 0
Query: 10 PVVQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLST--IESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVGYATIPSAATVLASTSEGKPG 131
P++Q+ + +L R+ +EAIL+ T++G+PL++ S+ S LS E+ + VF+ A +Q KL G S+ + + + L+ IN APLV++ V + P + A SE +P
Sbjct: 9 PILQEKLNDVLSRYDALEAILVCTSEGVPLLKV---------SAEEKSELSYEYTETVLPTVFAGAAEQVGKLKFGAVQSVTAFFDDVVLIHINHAPLVITLVAPNS-PHVGALHALASELRPA 122
BLAST of EWM22740.1 vs. NCBI_GenBank
Match: gi|1214690243|gb|OWZ05537.1| (Mitogen-activated protein kinase kinase 1 interacting protein, partial [Phytophthora megakarya]) HSP 1 Score: 58.151 bits (139), Expect = 1.738e-7 Identity = 38/124 (30.65%), Postives = 66/124 (53.23%), Query Frame = 0
Query: 10 PVVQQAFDQLLLRHPDVEAILLSTADGIPLMRAVRPTSPCFPSSTASSSLST--IESKVSAVFSIAVDQARKLGNGTCNSIVSLYQGLTLVQINLAPLVLSFVGYATIPSAATVLASTSEGKPG 131
P++Q+ + +L R+ +EAIL+ T++G+PL++ S+ S LS E+ + VF+ A +Q KL G S+ + + + L+ IN APLV++ V + P + A SE +P
Sbjct: 3 PILQEKLNDVLSRYDALEAILVCTSEGVPLLKV---------SAEEKSELSYEYTETVLPTVFAGAAEQVGKLKFGAVQSVTAFFDDVVLIHINHAPLVITLVAPNS-PHIGALHALASELRPA 116 The following BLAST results are available for this feature:
BLAST of EWM22740.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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