EWM22738.1, cds7934 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|585103331|gb|EWM22738.1| (glutaredoxin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 402.519 bits (1033), Expect = 5.116e-142 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
Query: 1 MTMPWLPRAASGASLLRSNSSSRTASLFALLVLGPLATTLSHAFLIFHARPGPSSIARLPASALGLSTPFCLPSSLRAVPEGLLNDDGEPQYDAPARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
MTMPWLPRAASGASLLRSNSSSRTASLFALLVLGPLATTLSHAFLIFHARPGPSSIARLPASALGLSTPFCLPSSLRAVPEGLLNDDGEPQYDAPARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS
Sbjct: 1 MTMPWLPRAASGASLLRSNSSSRTASLFALLVLGPLATTLSHAFLIFHARPGPSSIARLPASALGLSTPFCLPSSLRAVPEGLLNDDGEPQYDAPARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|553190307|ref|XP_005855164.1| (grx5, partial [Nannochloropsis gaditana CCMP526] >gi|422293896|gb|EKU21196.1| grx5, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 276.174 bits (705), Expect = 7.694e-93 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query: 1 MTMPWLPRAASGASLLRSNSSSRTASLFALLVLGPLATTLSHAFLIFHARPGPSSIARLPASALGLSTPFCLPSSLRAVPEGLLNDDGEPQYDAPARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNV 137
MTMPWLPRAASGASLLRSNSSSRTASLFALLVLGPLATTLSHAFLIFHARPGPSSIARLPASALGLSTPFCLPSSLRAVPEGLLNDDGEPQYDAPARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNV
Sbjct: 1 MTMPWLPRAASGASLLRSNSSSRTASLFALLVLGPLATTLSHAFLIFHARPGPSSIARLPASALGLSTPFCLPSSLRAVPEGLLNDDGEPQYDAPARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNV 137
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|493683898|ref|WP_006634036.1| (glutaredoxin [Microcoleus vaginatus] >gi|333457799|gb|EGK86420.1| glutaredoxin-like protein [Microcoleus vaginatus FGP-2]) HSP 1 Score: 153.68 bits (387), Expect = 6.991e-45 Identity = 66/103 (64.08%), Postives = 85/103 (82.52%), Query Frame = 0
Query: 96 ARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
A +I+EL+K NKI++FMKG +L P CGFSNT ++IL+ L V YETVDVLAD+ IR +K YS WPTIPQ+Y+ G+FIGGSDI++EMYQ GELQE++E+A AS
Sbjct: 5 AHQRIDELVKQNKIMVFMKGNKLMPQCGFSNTVVQILNTLGVPYETVDVLADQEIRQGVKEYSQWPTIPQVYINGEFIGGSDIMIEMYQKGELQEVVEVALAS 107
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|494518145|ref|WP_007307601.1| (glutaredoxin [Crocosphaera watsonii] >gi|67853264|gb|EAM48630.1| Glutaredoxin-related protein [Crocosphaera watsonii WH 8501] >gi|357261111|gb|EHJ10418.1| Uncharacterized monothiol glutaredoxin ycf64-like protein [Crocosphaera watsonii WH 0003] >gi|543518408|emb|CCQ49189.1| Uncharacterized monothiol glutaredoxin ycf64-like [Crocosphaera watsonii WH 8502] >gi|543523934|emb|CCQ57427.1| Uncharacterized monothiol glutaredoxin ycf64-like [Crocosphaera watsonii WH 0005]) HSP 1 Score: 151.369 bits (381), Expect = 4.983e-44 Identity = 64/102 (62.75%), Postives = 84/102 (82.35%), Query Frame = 0
Query: 97 RAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
+ +I++L+ NNKI++FMKG +L P CGFSN +++L+ L V YETVDVLADE IR IK YS+WPTIPQ+Y+ G+FIGG+DI+ EMYQ GELQ+MIE+A AS
Sbjct: 6 KDRIDQLVNNNKILVFMKGAKLMPQCGFSNNVVQVLNSLGVSYETVDVLADEEIRQGIKEYSSWPTIPQVYINGEFIGGADIVYEMYQKGELQQMIEVALAS 107
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|504991780|ref|WP_015178882.1| (monothiol glutaredoxin, Grx4 family [Oscillatoria nigro-viridis] >gi|428243889|gb|AFZ09675.1| glutaredoxin-like protein [Oscillatoria nigro-viridis PCC 7112]) HSP 1 Score: 149.828 bits (377), Expect = 1.747e-43 Identity = 64/103 (62.14%), Postives = 85/103 (82.52%), Query Frame = 0
Query: 96 ARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
A +I+EL+K NKI++FMKG +L P CGFSNT ++IL+ L V Y+T+DVLAD+ IR +K YS WPTIPQ+Y+ G+FIGGSDI++EMYQ GELQE++E+A AS
Sbjct: 5 AHQRIDELVKQNKIMVFMKGNKLMPQCGFSNTVVQILNTLGVPYKTLDVLADQEIRQGVKEYSNWPTIPQVYINGEFIGGSDIMIEMYQKGELQEIVEVALAS 107
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|546231656|ref|WP_021835059.1| (glutaredoxin [Crocosphaera watsonii] >gi|543431223|emb|CCQ60978.1| Uncharacterized monothiol glutaredoxin ycf64-like [Crocosphaera watsonii WH 0401]) HSP 1 Score: 149.828 bits (377), Expect = 2.295e-43 Identity = 63/102 (61.76%), Postives = 84/102 (82.35%), Query Frame = 0
Query: 97 RAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
+ +I++L+ NNKI++FMKG +L P CGFSN +++L+ L V YETVDVLA+E IR IK YS+WPTIPQ+Y+ G+FIGG+DI+ EMYQ GELQ+MIE+A AS
Sbjct: 6 KDRIDQLVNNNKILVFMKGAKLMPQCGFSNNVVQVLNSLGVSYETVDVLANEEIRQGIKEYSSWPTIPQVYINGEFIGGADIVYEMYQKGELQQMIEVALAS 107
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|1121220295|ref|WP_073547735.1| (monothiol glutaredoxin, Grx4 family [Chroogloeocystis siderophila] >gi|1115265608|gb|OKH29255.1| monothiol glutaredoxin, Grx4 family [Chroogloeocystis siderophila 5.2 s.c.1]) HSP 1 Score: 149.058 bits (375), Expect = 3.708e-43 Identity = 65/103 (63.11%), Postives = 85/103 (82.52%), Query Frame = 0
Query: 96 ARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
+A+I++LIK NKI++FMKGT+L P CGFSN ++IL+ L V +ETVDVLAD IR IK YS WPTIPQ+Y+ G+F+GGSDI++EMYQ GELQ+M+E+A AS
Sbjct: 5 VQARIDDLIKQNKIMVFMKGTKLMPQCGFSNNVVQILNVLGVPFETVDVLADPEIRQGIKEYSNWPTIPQVYINGEFVGGSDILIEMYQKGELQQMVEVALAS 107
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|676378199|ref|XP_009032378.1| (hypothetical protein AURANDRAFT_18629 [Aureococcus anophagefferens] >gi|323456862|gb|EGB12728.1| hypothetical protein AURANDRAFT_18629 [Aureococcus anophagefferens]) HSP 1 Score: 150.214 bits (378), Expect = 5.227e-43 Identity = 65/113 (57.52%), Postives = 90/113 (79.65%), Query Frame = 0
Query: 86 DDGEPQYDAPARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
DD EP DA + +I+ ++ +N ++LFMKGT++FP CGFSN A++IL+ + ++ET D L+DE +R IK +S WPTIPQLY+ G+F+GGSDI+LEMY+ GELQEMIE+AAAS
Sbjct: 35 DDVEPPPDATTK-RIQSMVDDNTVMLFMKGTKIFPQCGFSNMAVQILNAIGQDFETYDCLSDENVRSTIKEFSDWPTIPQLYVDGEFVGGSDIMLEMYEAGELQEMIEVAAAS 146
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|505007362|ref|WP_015194464.1| (monothiol glutaredoxin, Grx4 family [Stanieria cyanosphaera] >gi|428270861|gb|AFZ36802.1| glutaredoxin-like protein [Stanieria cyanosphaera PCC 7437]) HSP 1 Score: 148.288 bits (373), Expect = 8.221e-43 Identity = 63/103 (61.17%), Postives = 85/103 (82.52%), Query Frame = 0
Query: 96 ARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
+ +I++LI NNKI++FMKG++L P CGFSN ++IL+ L V YETVDVLAD IR IK YS WPTIPQ+Y+ G+F+GGSDI++E+YQ+GELQ+M+E+A AS
Sbjct: 5 VKDRIDQLINNNKILVFMKGSKLMPQCGFSNNVVQILNTLGVPYETVDVLADLEIRQGIKEYSNWPTIPQVYINGEFVGGSDIMIELYQSGELQQMVEVALAS 107
BLAST of EWM22738.1 vs. NCBI_GenBank
Match: gi|505002504|ref|WP_015189606.1| (monothiol glutaredoxin, Grx4 family [Gloeocapsa sp. PCC 7428] >gi|428265791|gb|AFZ31737.1| glutaredoxin-like protein [Gloeocapsa sp. PCC 7428]) HSP 1 Score: 148.288 bits (373), Expect = 8.682e-43 Identity = 64/103 (62.14%), Postives = 85/103 (82.52%), Query Frame = 0
Query: 96 ARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
+A+I++LIK NKI++FMKGT+L P CGFSN ++IL+ L V +ETVDVLAD IR IK YS WPTIPQ+Y+ G+F+GGSDI++EMYQ GELQ+++E+A AS
Sbjct: 5 VQARIDDLIKQNKIMVFMKGTKLMPQCGFSNNVVQILNVLGVPFETVDVLADSEIRQGIKEYSNWPTIPQVYINGEFVGGSDILIEMYQKGELQQVVEVALAS 107 The following BLAST results are available for this feature:
BLAST of EWM22738.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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