EWM22746.1, cds7919 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|585103345|gb|EWM22746.1| (translocase of inner mitochondrial membrane 13 [Nannochloropsis gaditana]) HSP 1 Score: 171.785 bits (434), Expect = 1.996e-54 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 1 MAQKLTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSERSATR 82
MAQKLTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSERSATR
Sbjct: 1 MAQKLTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSERSATR 82
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|585103346|gb|EWM22747.1| (translocase of inner mitochondrial membrane 13 [Nannochloropsis gaditana]) HSP 1 Score: 171.785 bits (434), Expect = 5.791e-54 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 1 MAQKLTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSERSATR 82
MAQKLTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSERSATR
Sbjct: 33 MAQKLTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSERSATR 114
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|780688791|ref|XP_011699120.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim13 [Wasmannia auropunctata]) HSP 1 Score: 84.7297 bits (208), Expect = 9.615e-20 Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 0
Query: 2 AQKLTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSER 78
A LT Q++ ++ + + ++A QEL+ KMT+KCF KC GK G LDS EQ C+AMCMDRY+++ N+V + SER
Sbjct: 6 AGNLTGSQRDELMQQLKQQIAVANAQELLTKMTEKCFKKCIGKPGTSLDSSEQKCIAMCMDRYMDSFNLVSKTYSER 82
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|675859818|ref|XP_009015469.1| (hypothetical protein HELRODRAFT_64842 [Helobdella robusta] >gi|555702868|gb|ESO06101.1| hypothetical protein HELRODRAFT_64842 [Helobdella robusta]) HSP 1 Score: 84.7297 bits (208), Expect = 1.113e-19 Identity = 36/77 (46.75%), Postives = 56/77 (72.73%), Query Frame = 0
Query: 2 AQKLTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSER 78
A KL +Q++ ++ + +A++A QEL+QKM+DKCF KC K G+ LD+ EQ C+AMCMDRY++T N+V + ++R
Sbjct: 11 AGKLDSNQKQQLMEQVKAQIAVANAQELLQKMSDKCFKKCIPKPGSGLDNSEQKCIAMCMDRYMDTWNIVSKTYTQR 87
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|695432054|ref|XP_009530841.1| (hypothetical protein PHYSODRAFT_286614 [Phytophthora sojae] >gi|348673593|gb|EGZ13412.1| hypothetical protein PHYSODRAFT_286614 [Phytophthora sojae]) HSP 1 Score: 83.5741 bits (205), Expect = 1.751e-19 Identity = 33/76 (43.42%), Postives = 55/76 (72.37%), Query Frame = 0
Query: 5 LTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSERSA 80
TP Q+ +I++ R+E+ QA+QEL Q + +KCF KC + +LD K+QNC+A+C++RYI+TM VV ++++R +
Sbjct: 6 FTPQQKAELINRVRSEVQQQALQELTQNLQEKCFDKCITRPNGKLDGKQQNCLALCINRYIDTMKVVSEAMAQRGS 81
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|1070139507|ref|XP_018356596.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-B [Trachymyrmex septentrionalis]) HSP 1 Score: 83.9593 bits (206), Expect = 1.804e-19 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 0
Query: 5 LTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSER 78
LT Q++ ++ + + ++A QEL+ KMT+KCF KC GK G LDS EQ C+AMCMDRY+++ N+V S SER
Sbjct: 8 LTSLQRDELMQQVKQQIAVANAQELLTKMTEKCFKKCIGKPGTSLDSSEQKCIAMCMDRYLDSFNLVSKSYSER 81
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|751238992|ref|XP_011173468.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-B-like isoform X1 [Solenopsis invicta]) HSP 1 Score: 83.5741 bits (205), Expect = 2.079e-19 Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 0
Query: 5 LTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSER 78
L+ QQE + + + ++A QEL+QKMT+KCF KC GK G LDS EQ C+AMCMDRY+++ N+V + SER
Sbjct: 11 LSSSQQE-FVQQVKQQIAVANAQELLQKMTEKCFKKCIGKPGTSLDSSEQKCIAMCMDRYMDSFNLVSKTYSER 83
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|801399925|ref|XP_012060497.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-B [Atta cephalotes] >gi|1068423267|ref|XP_018056184.1| PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-B [Atta colombica] >gi|1009351257|gb|KYM76737.1| Mitochondrial import inner membrane translocase subunit Tim13-B [Atta colombica]) HSP 1 Score: 83.5741 bits (205), Expect = 2.283e-19 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 0
Query: 5 LTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSER 78
LT Q++ ++ + + ++A QEL+ KMT+KCF KC GK G LDS EQ CVAMCMDRY+++ N+V + SER
Sbjct: 9 LTGSQRDELMQQVKQQIAVANAQELLTKMTEKCFKKCIGKPGTSLDSSEQKCVAMCMDRYMDSFNLVSKTYSER 82
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|826411472|ref|XP_012542773.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-B-like [Monomorium pharaonis]) HSP 1 Score: 83.1889 bits (204), Expect = 3.001e-19 Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 0
Query: 5 LTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSER 78
LT Q++ ++ + + ++A QEL+QKMT+KCF KC K G LDS EQ C+AMCMDRY+++ N+V + SER
Sbjct: 9 LTGSQRDELMQQVKQQIAVANAQELLQKMTEKCFRKCISKPGTSLDSSEQKCIAMCMDRYMDSFNIVSKTYSER 82
BLAST of EWM22746.1 vs. NCBI_GenBank
Match: gi|769864556|ref|XP_011644165.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim13 [Pogonomyrmex barbatus]) HSP 1 Score: 83.1889 bits (204), Expect = 3.001e-19 Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 0
Query: 5 LTPDQQEAVIHKFRAEMAAQAMQELVQKMTDKCFSKCTGKSGNRLDSKEQNCVAMCMDRYIETMNVVQHSLSER 78
LT Q++ ++ + + ++A QEL+ KMT+KCF KC GK G LDS EQ C+AMCMDRY+++ N+V + SER
Sbjct: 9 LTGSQRDELMQQVKQQIAVANAQELLTKMTEKCFKKCIGKPGTSLDSSEQKCIAMCMDRYMDSFNLVSKTYSER 82 The following BLAST results are available for this feature:
BLAST of EWM22746.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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