EWM22760.1, cds7913 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|585103360|gb|EWM22760.1| (branched-chain-amino-acid aminotransferase [Nannochloropsis gaditana]) HSP 1 Score: 284.648 bits (727), Expect = 2.833e-97 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 1 MSKIFPFLTRTRRGLIPARPPTSIKRESKNSGCFQSFLSYPFLQQPHHHTVHNEAPDGAPIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
MSKIFPFLTRTRRGLIPARPPTSIKRESKNSGCFQSFLSYPFLQQPHHHTVHNEAPDGAPIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA
Sbjct: 1 MSKIFPFLTRTRRGLIPARPPTSIKRESKNSGCFQSFLSYPFLQQPHHHTVHNEAPDGAPIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|1173951393|gb|OQR99282.1| (branched-chain-amino-acid aminotransferase [Achlya hypogyna]) HSP 1 Score: 108.997 bits (271), Expect = 1.243e-25 Identity = 46/78 (58.97%), Postives = 61/78 (78.21%), Query Frame = 0
Query: 59 APIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
AP+D + +TT+P+PKVP+++L FG F+DHMLEIDWD K+GW P+I Y PL++ PA+S LHYAL+CFEGMKA
Sbjct: 24 APLDSSKTIVHKTTNPKPKVPKEQLTFGTTFTDHMLEIDWDQKSGWGTPLIRPYGPLNIDPASSSLHYALQCFEGMKA 101
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|1214689137|gb|OWZ04820.1| (Branched-chain amino acid aminotransferase [Phytophthora megakarya]) HSP 1 Score: 108.612 bits (270), Expect = 1.713e-25 Identity = 46/79 (58.23%), Postives = 62/79 (78.48%), Query Frame = 0
Query: 58 GAPIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
GA I ++I+RT+SP+ K+P+++L FGK F+DHMLE+DW+ GW PVI Y P+S+ PA++VLHYALECFEGMKA
Sbjct: 23 GADIKASNLQIERTSSPKAKLPKEQLQFGKTFTDHMLEVDWEMGKGWGNPVIHPYGPISMDPASAVLHYALECFEGMKA 101
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|675192303|ref|XP_008905036.1| (branched-chain amino acid aminotransferase [Phytophthora parasitica INRA-310] >gi|568095120|gb|ETN09890.1| branched-chain amino acid aminotransferase [Phytophthora parasitica INRA-310]) HSP 1 Score: 108.612 bits (270), Expect = 1.823e-25 Identity = 45/79 (56.96%), Postives = 63/79 (79.75%), Query Frame = 0
Query: 58 GAPIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
GA I ++++RT++P+PK+P+++L FGK F+DHMLE+DW+ GW PVI Y P++L PA++VLHYALECFEGMKA
Sbjct: 23 GADISYANLQVERTSNPKPKLPKEQLKFGKTFTDHMLEVDWELGKGWGSPVIHPYGPMALDPASAVLHYALECFEGMKA 101
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|566024635|gb|ETI47546.1| (branched-chain amino acid aminotransferase [Phytophthora parasitica P1569] >gi|567961945|gb|ETK87479.1| branched-chain amino acid aminotransferase [Phytophthora parasitica] >gi|567990682|gb|ETL40907.1| branched-chain amino acid aminotransferase [Phytophthora parasitica] >gi|568019923|gb|ETL94063.1| branched-chain amino acid aminotransferase [Phytophthora parasitica] >gi|568050355|gb|ETM47300.1| branched-chain amino acid aminotransferase [Phytophthora parasitica] >gi|570328301|gb|ETO76249.1| branched-chain amino acid aminotransferase [Phytophthora parasitica P1976] >gi|570952088|gb|ETP17345.1| branched-chain amino acid aminotransferase [Phytophthora parasitica CJ01A1] >gi|570986331|gb|ETP45379.1| branched-chain amino acid aminotransferase [Phytophthora parasitica P10297] >gi|970651644|gb|KUF90427.1| Phospholipid-transporting ATPase 3 [Phytophthora nicotianae] >gi|970663567|gb|KUG00697.1| Branched-chain-amino-acid aminotransferase [Phytophthora nicotianae]) HSP 1 Score: 108.612 bits (270), Expect = 1.980e-25 Identity = 45/79 (56.96%), Postives = 63/79 (79.75%), Query Frame = 0
Query: 58 GAPIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
GA I ++++RT++P+PK+P+++L FGK F+DHMLE+DW+ GW PVI Y P++L PA++VLHYALECFEGMKA
Sbjct: 23 GADISYANLQVERTSNPKPKLPKEQLKFGKTFTDHMLEVDWELGKGWGSPVIHPYGPMALDPASAVLHYALECFEGMKA 101
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|1160568831|ref|XP_020427975.1| (branched-chain amino acid aminotransferase [Polysphondylium pallidum PN500] >gi|281201632|gb|EFA75841.1| branched-chain amino acid aminotransferase [Polysphondylium pallidum PN500]) HSP 1 Score: 108.227 bits (269), Expect = 3.358e-25 Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 0
Query: 5 FPFLTRTRRGLIPARPPTSIKRESKNSG--CFQSFLSYPFLQQPHHHTVHNEAPDGAPIDPKLMRIQRTTSPRPKVPQK-ELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
F T++ ++ A+ TSI R S N+ F + S+ Q+P I+ + +++T P PK K +L+FGK FSDHMLEI+WD NGW P ISAYH LSL P+ASV HYA+ECFEGMKA
Sbjct: 4 FRVFQSTKKIILQAKMFTSILRNSYNTNRVAFNAIRSFSTAQKP--------------INVNSLVVEKTKQPLPKFTDKNKLIFGKEFSDHMLEIEWDINNGWSAPKISAYHNLSLPPSASVFHYAIECFEGMKA 124
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|448513101|ref|XP_003866867.1| (Bat21 branched chain amino acid aminotransferase [Candida orthopsilosis Co 90-125] >gi|380351205|emb|CCG21428.1| Bat21 branched chain amino acid aminotransferase [Candida orthopsilosis Co 90-125]) HSP 1 Score: 107.842 bits (268), Expect = 4.002e-25 Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query: 37 FLSYPFLQQPHHHTVHNEAPDGAPIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
LS FL + + N AP++ + I++TT+P+PK+P+ ELVFGK F+DHMLE++WD + GW P IS YH LSL P+ V HYA E FEGMKA
Sbjct: 10 LLSRSFLARSFNR--FNSTNATAPLNASKLVIEKTTNPKPKLPKNELVFGKTFTDHMLEVEWDTETGWGIPKISPYHNLSLDPSTIVFHYAFELFEGMKA 107
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|354546732|emb|CCE43464.1| (hypothetical protein CPAR2_211080 [Candida parapsilosis]) HSP 1 Score: 107.842 bits (268), Expect = 4.044e-25 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 0
Query: 39 SYPFLQQ---PHHHTVHNEAPDGAPIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
S+P L + P N AP++ + I++TTSP+PK+P+ ELVFGK F+DHMLE++WD + GW P IS YH LSL P+ V HYA E FEGMKA
Sbjct: 7 SFPLLSRTLVPRPFYRFNSTQTVAPLNASKLVIEKTTSPKPKLPKNELVFGKTFTDHMLEVEWDAETGWGAPKISPYHNLSLDPSTIVFHYAFELFEGMKA 107
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|569439736|gb|ETO36257.1| (branched-chain amino acid aminotransferase [Reticulomyxa filosa]) HSP 1 Score: 107.842 bits (268), Expect = 7.151e-25 Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 0
Query: 61 IDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
ID K + IQ+TTSP+ K ++L+FG F+DHMLEIDWD NGWH P+I Y PLSL P+ASVLHYA+E FEG+KA
Sbjct: 47 IDSKKLIIQKTTSPKKKTAYEQLIFGHEFTDHMLEIDWDQVNGWHEPIIRPYGPLSLEPSASVLHYAIEAFEGLKA 122
BLAST of EWM22760.1 vs. NCBI_GenBank
Match: gi|149248248|ref|XP_001528511.1| (branched-chain-amino-acid aminotransferase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] >gi|146448465|gb|EDK42853.1| branched-chain-amino-acid aminotransferase, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239]) HSP 1 Score: 107.071 bits (266), Expect = 8.142e-25 Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 0
Query: 59 APIDPKLMRIQRTTSPRPKVPQKELVFGKVFSDHMLEIDWDYKNGWHPPVISAYHPLSLSPAASVLHYALECFEGMKA 136
AP+D + I++TT+P+ K+P+ ELVFGK F+DHMLEI+W+ GW P IS YH LSL P+ V HYA ECFEGMKA
Sbjct: 26 APLDASKLIIEKTTTPKLKLPKDELVFGKTFTDHMLEIEWNKSTGWGAPKISPYHNLSLDPSTIVFHYAFECFEGMKA 103 The following BLAST results are available for this feature:
BLAST of EWM22760.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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