EWM29865.1, cds791 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|585112447|gb|EWM29865.1| (s-adenosylmethionine-dependent methyltransferase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 810.446 bits (2092), Expect = 0.000e+0 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0 Query: 1 MWCLISCSTRTGGPPPTSSPSQHSHPHRQTHPFQAVDAMIRSRISARRKINHSLLCVAGCLFLDCNVVTKGIPVAALLLSPVPVIANIYPAFTHASPSLQRQARRPQAKHFCPLLSAHLRPERTMGKRGSRGNEQAEGKQKVASGEEVSRLSRRESFLPALIALGSGALLLNKSLNEERAYEGLHQELFALLSASASGAGEAGRDVRAPKVLEIGVGQGVNVKYYPSGCEVVGLDPNLNQDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKLFDRVERLNYLEMDTQWPVSVQVAGVLVK 395 MWCLISCSTRTGGPPPTSSPSQHSHPHRQTHPFQAVDAMIRSRISARRKINHSLLCVAGCLFLDCNVVTKGIPVAALLLSPVPVIANIYPAFTHASPSLQRQARRPQAKHFCPLLSAHLRPERTMGKRGSRGNEQAEGKQKVASGEEVSRLSRRESFLPALIALGSGALLLNKSLNEERAYEGLHQELFALLSASASGAGEAGRDVRAPKVLEIGVGQGVNVKYYPSGCEVVGLDPNLNQDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKLFDRVERLNYLEMDTQWPVSVQVAGVLVK Sbjct: 1 MWCLISCSTRTGGPPPTSSPSQHSHPHRQTHPFQAVDAMIRSRISARRKINHSLLCVAGCLFLDCNVVTKGIPVAALLLSPVPVIANIYPAFTHASPSLQRQARRPQAKHFCPLLSAHLRPERTMGKRGSRGNEQAEGKQKVASGEEVSRLSRRESFLPALIALGSGALLLNKSLNEERAYEGLHQELFALLSASASGAGEAGRDVRAPKVLEIGVGQGVNVKYYPSGCEVVGLDPNLNQDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKLFDRVERLNYLEMDTQWPVSVQVAGVLVK 395
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|298711514|emb|CBJ26602.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 135.576 bits (340), Expect = 5.082e-34 Identity = 75/160 (46.88%), Postives = 99/160 (61.88%), Query Frame = 0 Query: 238 LNQDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPV--LHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKLFDRVERLNYLEMDTQWPVSVQVAGVLVK 395 L+ A+ A KA+ + + G E LPF +SFDAVVSTLVFCSV+D A AL EV+RVLRPGGKFLFVEH+ A ++ + L + Q ++DPLQ L +GCHL R T L+ R+R LF R+E + + + + WPVS QV GV+VK Sbjct: 79 LDFPALERATEKAQKLGLTLRGVGGIVEELPFESSSFDAVVSTLVFCSVRDPAAALREVSRVLRPGGKFLFVEHVHAPDEGLSILGLRQQQELLDPLQQLLADGCHLTRETGQLIRDSAGESPSRNR----LFSRIETIESVRIKSMWPVSEQVFGVVVK 234
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|1073004193|ref|XP_018453102.1| (PREDICTED: methyltransferase-like protein 7B isoform X3 [Raphanus sativus]) HSP 1 Score: 133.65 bits (335), Expect = 1.076e-32 Identity = 74/158 (46.84%), Postives = 100/158 (63.29%), Query Frame = 0 Query: 207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAMS-VAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361 +A KVLEIGVG G N KYY + V+G+DPN ++ + + ++A + +S + AE++P DAS DAVV TLV CSV D R L E+ RVLRPGG +LF+EH+ AGE + L VQ ++DPLQ + +GCHL R T D +L E + GG D Sbjct: 120 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYARKSAAEAGLKPEDFSFIHAVAEAIPLEDASVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRRTGDYIL-EARFNGGAD 274
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|1190957753|ref|XP_020889786.1| (LOW QUALITY PROTEIN: methyltransferase-like protein 7A [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 133.65 bits (335), Expect = 1.525e-32 Identity = 73/166 (43.98%), Postives = 101/166 (60.84%), Query Frame = 0 Query: 207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAMSVAQSKAKARNIQ---WSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKL 367 +A KVLEIG+G G N KYY + V+G+DPN + S A+ A+ ++ ++ + ES+P DAS DAVV TLV CSV D R L E+ RVLRPGG F+F+EH+ A ++ L VQ ++DPLQ + +GCHL RHT + +L E + GG D + L Sbjct: 125 KAEKVLEIGIGTGPNFKYYTAIPNLSVIGIDPNARME--SYARKSAEEAGLKPEDFTFIHALGESIPLEDASVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGTFIFIEHVAA--EDGTFLRLVQNVLDPLQQVVADGCHLTRHTGESIL-EARFNGGADVKKASL 285
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|1073004191|ref|XP_018453101.1| (PREDICTED: methyltransferase-like protein 7A isoform X2 [Raphanus sativus]) HSP 1 Score: 133.65 bits (335), Expect = 1.691e-32 Identity = 74/158 (46.84%), Postives = 100/158 (63.29%), Query Frame = 0 Query: 207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAMS-VAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361 +A KVLEIGVG G N KYY + V+G+DPN ++ + + ++A + +S + AE++P DAS DAVV TLV CSV D R L E+ RVLRPGG +LF+EH+ AGE + L VQ ++DPLQ + +GCHL R T D +L E + GG D Sbjct: 120 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYARKSAAEAGLKPEDFSFIHAVAEAIPLEDASVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRRTGDYIL-EARFNGGAD 274
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|674937275|emb|CDX95927.1| (BnaA07g28040D [Brassica napus]) HSP 1 Score: 133.65 bits (335), Expect = 2.206e-32 Identity = 75/167 (44.91%), Postives = 104/167 (62.28%), Query Frame = 0 Query: 207 RAPKVLEIGVGQGVNVKYY---PSGCEVVGLDPNLNQDA---MSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKL 367 +A VLEIG+G G N+KYY P+ C V+G+DPN ++ S ++ K+ N ++ + AES+P DAS DAVV +LV CSV D + L E+ R+L+PGG +LFVEH+ A E + L VQ ++DPLQ + +GCHL R+T+D LL E GG D V L Sbjct: 134 KAETVLEIGIGAGPNIKYYNNIPNVC-VLGVDPNPKMESHARKSAIEAGVKSENFKF--IHAVAESMPLEDASVDAVVGSLVMCSVTDIPQTLKEIKRILKPGGLYLFVEHV-AAEADGTFLRMVQNVLDPLQQVVADGCHLTRNTEDYLL-EAGFKGGVDINKVSL 295
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|1073004189|ref|XP_018453100.1| (PREDICTED: methyltransferase-like protein 7B isoform X1 [Raphanus sativus]) HSP 1 Score: 133.265 bits (334), Expect = 2.329e-32 Identity = 74/158 (46.84%), Postives = 100/158 (63.29%), Query Frame = 0 Query: 207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAMS-VAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361 +A KVLEIGVG G N KYY + V+G+DPN ++ + + ++A + +S + AE++P DAS DAVV TLV CSV D R L E+ RVLRPGG +LF+EH+ AGE + L VQ ++DPLQ + +GCHL R T D +L E + GG D Sbjct: 120 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYARKSAAEAGLKPEDFSFIHAVAEAIPLEDASVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRRTGDYIL-EARFNGGAD 274
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|923843346|ref|XP_013701536.1| (PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843349|ref|XP_013701537.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843352|ref|XP_013701538.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843354|ref|XP_013701539.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843357|ref|XP_013701541.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843364|ref|XP_013701542.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus]) HSP 1 Score: 132.88 bits (333), Expect = 2.922e-32 Identity = 75/158 (47.47%), Postives = 100/158 (63.29%), Query Frame = 0 Query: 207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAM-SVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361 +A KVLEIGVG G N KYY + V+G+DPN ++ S + ++A + +S + AE++P +AS DAVV TLV CSV D R L EV RVLRPGG +LF+EH+ AGE + L VQ ++DPLQ + +GCHL R T D +L E + GG D Sbjct: 119 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYASKSAAQAGLKPEDFSFIRAVAEAIPLENASVDAVVGTLVLCSVADVTRTLNEVKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRCTGDYIL-EARFNGGAD 273
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|922514178|ref|XP_013592484.1| (PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514181|ref|XP_013592485.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514184|ref|XP_013592486.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514187|ref|XP_013592487.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514190|ref|XP_013592488.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514193|ref|XP_013592489.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea]) HSP 1 Score: 132.88 bits (333), Expect = 3.207e-32 Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 0 Query: 207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAM---SVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361 +A KVLEIGVG G N KYY + V+G+DPN ++ S AQ+ K + +S + AE++P +AS DAVV TLV CSV D R L EV RVLRPGG +LF+EH+ AGE + L VQ ++DPLQ + +GCHL R T D +L E + GG D Sbjct: 119 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYARKSAAQAGLKPED--FSFIRAVAEAIPLENASVDAVVGTLVLCSVADVTRTLNEVKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRCTGDYIL-EARFNGGAD 273
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|923667026|ref|XP_013649378.1| (PREDICTED: methyltransferase-like protein 7B [Brassica napus] >gi|923667030|ref|XP_013649379.1| PREDICTED: methyltransferase-like protein 7B [Brassica napus] >gi|923667033|ref|XP_013649380.1| PREDICTED: methyltransferase-like protein 7B [Brassica napus] >gi|674937273|emb|CDX95925.1| BnaA07g28060D [Brassica napus]) HSP 1 Score: 132.494 bits (332), Expect = 4.365e-32 Identity = 76/160 (47.50%), Postives = 99/160 (61.88%), Query Frame = 0 Query: 207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAM---SVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361 +A KVLEIGVG G N KYY + V+G+DPN ++ S AQ+ K +S + AE++P D+S DAVV TLV CSV D R L E+ RVLRPGG +LF+EH+ AGE + L VQ ++DPLQ + +GCHL R T D +L E + GG D Sbjct: 118 KAEKVLEIGVGTGPNFKYYSNIPNVSVLGVDPNAKMESYARKSAAQAGLKPE--YFSFIHAVAEAIPLEDSSVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRCTGDYIL-EARFNGGAD 272 The following BLAST results are available for this feature:
BLAST of EWM29865.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|