EWM29865.1, cds791 (CDS) Nannochloropsis gaditana

Overview
NameEWM29865.1
Unique Namecds791
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:429602..429915 -
Alignment locationCM002456.1:429076..429502 -
Alignment locationCM002456.1:428508..428954 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29865.1
Products-adenosylmethionine-dependent methyltransferase domain-containing protein
Orig transcript idgnl|cribi|Naga_100106g3.1439.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:429602..429915 -
CM002456.1supercontigCM002456.1:429076..429502 -
CM002456.1supercontigCM002456.1:428508..428954 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR013216Methyltransf_11
Homology
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|585112447|gb|EWM29865.1| (s-adenosylmethionine-dependent methyltransferase domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 810.446 bits (2092), Expect = 0.000e+0
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
Query:    1 MWCLISCSTRTGGPPPTSSPSQHSHPHRQTHPFQAVDAMIRSRISARRKINHSLLCVAGCLFLDCNVVTKGIPVAALLLSPVPVIANIYPAFTHASPSLQRQARRPQAKHFCPLLSAHLRPERTMGKRGSRGNEQAEGKQKVASGEEVSRLSRRESFLPALIALGSGALLLNKSLNEERAYEGLHQELFALLSASASGAGEAGRDVRAPKVLEIGVGQGVNVKYYPSGCEVVGLDPNLNQDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKLFDRVERLNYLEMDTQWPVSVQVAGVLVK 395
            MWCLISCSTRTGGPPPTSSPSQHSHPHRQTHPFQAVDAMIRSRISARRKINHSLLCVAGCLFLDCNVVTKGIPVAALLLSPVPVIANIYPAFTHASPSLQRQARRPQAKHFCPLLSAHLRPERTMGKRGSRGNEQAEGKQKVASGEEVSRLSRRESFLPALIALGSGALLLNKSLNEERAYEGLHQELFALLSASASGAGEAGRDVRAPKVLEIGVGQGVNVKYYPSGCEVVGLDPNLNQDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKLFDRVERLNYLEMDTQWPVSVQVAGVLVK
Sbjct:    1 MWCLISCSTRTGGPPPTSSPSQHSHPHRQTHPFQAVDAMIRSRISARRKINHSLLCVAGCLFLDCNVVTKGIPVAALLLSPVPVIANIYPAFTHASPSLQRQARRPQAKHFCPLLSAHLRPERTMGKRGSRGNEQAEGKQKVASGEEVSRLSRRESFLPALIALGSGALLLNKSLNEERAYEGLHQELFALLSASASGAGEAGRDVRAPKVLEIGVGQGVNVKYYPSGCEVVGLDPNLNQDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKLFDRVERLNYLEMDTQWPVSVQVAGVLVK 395          
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|298711514|emb|CBJ26602.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 135.576 bits (340), Expect = 5.082e-34
Identity = 75/160 (46.88%), Postives = 99/160 (61.88%), Query Frame = 0
Query:  238 LNQDAMSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPV--LHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKLFDRVERLNYLEMDTQWPVSVQVAGVLVK 395
            L+  A+  A  KA+   +    + G  E LPF  +SFDAVVSTLVFCSV+D A AL EV+RVLRPGGKFLFVEH+ A ++   +  L + Q ++DPLQ  L +GCHL R T  L+         R+R    LF R+E +  + + + WPVS QV GV+VK
Sbjct:   79 LDFPALERATEKAQKLGLTLRGVGGIVEELPFESSSFDAVVSTLVFCSVRDPAAALREVSRVLRPGGKFLFVEHVHAPDEGLSILGLRQQQELLDPLQQLLADGCHLTRETGQLIRDSAGESPSRNR----LFSRIETIESVRIKSMWPVSEQVFGVVVK 234          
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|1073004193|ref|XP_018453102.1| (PREDICTED: methyltransferase-like protein 7B isoform X3 [Raphanus sativus])

HSP 1 Score: 133.65 bits (335), Expect = 1.076e-32
Identity = 74/158 (46.84%), Postives = 100/158 (63.29%), Query Frame = 0
Query:  207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAMS-VAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361
            +A KVLEIGVG G N KYY +     V+G+DPN   ++ +  + ++A  +   +S +   AE++P  DAS DAVV TLV CSV D  R L E+ RVLRPGG +LF+EH+ AGE +   L  VQ ++DPLQ  + +GCHL R T D +L E +  GG D
Sbjct:  120 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYARKSAAEAGLKPEDFSFIHAVAEAIPLEDASVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRRTGDYIL-EARFNGGAD 274          
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|1190957753|ref|XP_020889786.1| (LOW QUALITY PROTEIN: methyltransferase-like protein 7A [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 133.65 bits (335), Expect = 1.525e-32
Identity = 73/166 (43.98%), Postives = 101/166 (60.84%), Query Frame = 0
Query:  207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAMSVAQSKAKARNIQ---WSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKL 367
            +A KVLEIG+G G N KYY +     V+G+DPN   +  S A+  A+   ++   ++ +    ES+P  DAS DAVV TLV CSV D  R L E+ RVLRPGG F+F+EH+ A  ++   L  VQ ++DPLQ  + +GCHL RHT + +L E +  GG D +   L
Sbjct:  125 KAEKVLEIGIGTGPNFKYYTAIPNLSVIGIDPNARME--SYARKSAEEAGLKPEDFTFIHALGESIPLEDASVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGTFIFIEHVAA--EDGTFLRLVQNVLDPLQQVVADGCHLTRHTGESIL-EARFNGGADVKKASL 285          
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|1073004191|ref|XP_018453101.1| (PREDICTED: methyltransferase-like protein 7A isoform X2 [Raphanus sativus])

HSP 1 Score: 133.65 bits (335), Expect = 1.691e-32
Identity = 74/158 (46.84%), Postives = 100/158 (63.29%), Query Frame = 0
Query:  207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAMS-VAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361
            +A KVLEIGVG G N KYY +     V+G+DPN   ++ +  + ++A  +   +S +   AE++P  DAS DAVV TLV CSV D  R L E+ RVLRPGG +LF+EH+ AGE +   L  VQ ++DPLQ  + +GCHL R T D +L E +  GG D
Sbjct:  120 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYARKSAAEAGLKPEDFSFIHAVAEAIPLEDASVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRRTGDYIL-EARFNGGAD 274          
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|674937275|emb|CDX95927.1| (BnaA07g28040D [Brassica napus])

HSP 1 Score: 133.65 bits (335), Expect = 2.206e-32
Identity = 75/167 (44.91%), Postives = 104/167 (62.28%), Query Frame = 0
Query:  207 RAPKVLEIGVGQGVNVKYY---PSGCEVVGLDPNLNQDA---MSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRDREGVKL 367
            +A  VLEIG+G G N+KYY   P+ C V+G+DPN   ++    S  ++  K+ N ++  +   AES+P  DAS DAVV +LV CSV D  + L E+ R+L+PGG +LFVEH+ A E +   L  VQ ++DPLQ  + +GCHL R+T+D LL E    GG D   V L
Sbjct:  134 KAETVLEIGIGAGPNIKYYNNIPNVC-VLGVDPNPKMESHARKSAIEAGVKSENFKF--IHAVAESMPLEDASVDAVVGSLVMCSVTDIPQTLKEIKRILKPGGLYLFVEHV-AAEADGTFLRMVQNVLDPLQQVVADGCHLTRNTEDYLL-EAGFKGGVDINKVSL 295          
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|1073004189|ref|XP_018453100.1| (PREDICTED: methyltransferase-like protein 7B isoform X1 [Raphanus sativus])

HSP 1 Score: 133.265 bits (334), Expect = 2.329e-32
Identity = 74/158 (46.84%), Postives = 100/158 (63.29%), Query Frame = 0
Query:  207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAMS-VAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361
            +A KVLEIGVG G N KYY +     V+G+DPN   ++ +  + ++A  +   +S +   AE++P  DAS DAVV TLV CSV D  R L E+ RVLRPGG +LF+EH+ AGE +   L  VQ ++DPLQ  + +GCHL R T D +L E +  GG D
Sbjct:  120 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYARKSAAEAGLKPEDFSFIHAVAEAIPLEDASVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRRTGDYIL-EARFNGGAD 274          
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|923843346|ref|XP_013701536.1| (PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843349|ref|XP_013701537.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843352|ref|XP_013701538.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843354|ref|XP_013701539.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843357|ref|XP_013701541.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus] >gi|923843364|ref|XP_013701542.1| PREDICTED: methyltransferase-like protein 7A [Brassica napus])

HSP 1 Score: 132.88 bits (333), Expect = 2.922e-32
Identity = 75/158 (47.47%), Postives = 100/158 (63.29%), Query Frame = 0
Query:  207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAM-SVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361
            +A KVLEIGVG G N KYY +     V+G+DPN   ++  S + ++A  +   +S +   AE++P  +AS DAVV TLV CSV D  R L EV RVLRPGG +LF+EH+ AGE +   L  VQ ++DPLQ  + +GCHL R T D +L E +  GG D
Sbjct:  119 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYASKSAAQAGLKPEDFSFIRAVAEAIPLENASVDAVVGTLVLCSVADVTRTLNEVKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRCTGDYIL-EARFNGGAD 273          
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|922514178|ref|XP_013592484.1| (PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514181|ref|XP_013592485.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514184|ref|XP_013592486.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514187|ref|XP_013592487.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514190|ref|XP_013592488.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea] >gi|922514193|ref|XP_013592489.1| PREDICTED: methyltransferase-like protein 7A [Brassica oleracea var. oleracea])

HSP 1 Score: 132.88 bits (333), Expect = 3.207e-32
Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 0
Query:  207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAM---SVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361
            +A KVLEIGVG G N KYY +     V+G+DPN   ++    S AQ+  K  +  +S +   AE++P  +AS DAVV TLV CSV D  R L EV RVLRPGG +LF+EH+ AGE +   L  VQ ++DPLQ  + +GCHL R T D +L E +  GG D
Sbjct:  119 KAEKVLEIGVGTGPNFKYYSAIPNVSVLGVDPNAKMESYARKSAAQAGLKPED--FSFIRAVAEAIPLENASVDAVVGTLVLCSVADVTRTLNEVKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRCTGDYIL-EARFNGGAD 273          
BLAST of EWM29865.1 vs. NCBI_GenBank
Match: gi|923667026|ref|XP_013649378.1| (PREDICTED: methyltransferase-like protein 7B [Brassica napus] >gi|923667030|ref|XP_013649379.1| PREDICTED: methyltransferase-like protein 7B [Brassica napus] >gi|923667033|ref|XP_013649380.1| PREDICTED: methyltransferase-like protein 7B [Brassica napus] >gi|674937273|emb|CDX95925.1| BnaA07g28060D [Brassica napus])

HSP 1 Score: 132.494 bits (332), Expect = 4.365e-32
Identity = 76/160 (47.50%), Postives = 99/160 (61.88%), Query Frame = 0
Query:  207 RAPKVLEIGVGQGVNVKYYPS--GCEVVGLDPNLNQDAM---SVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVARVLRPGGKFLFVEHIWAGEKEHPVLHRVQGIMDPLQAFLVNGCHLVRHTDDLLLGETKGGGGRD 361
            +A KVLEIGVG G N KYY +     V+G+DPN   ++    S AQ+  K     +S +   AE++P  D+S DAVV TLV CSV D  R L E+ RVLRPGG +LF+EH+ AGE +   L  VQ ++DPLQ  + +GCHL R T D +L E +  GG D
Sbjct:  118 KAEKVLEIGVGTGPNFKYYSNIPNVSVLGVDPNAKMESYARKSAAQAGLKPE--YFSFIHAVAEAIPLEDSSVDAVVGTLVLCSVADVTRTLNEIKRVLRPGGVYLFIEHV-AGE-DGSFLRLVQNVLDPLQQVVADGCHLTRCTGDYIL-EARFNGGAD 272          
The following BLAST results are available for this feature:
BLAST of EWM29865.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Position :
0
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01SequenceEWM29865.1CBJ26602.1XP_018453102.1XP_020889786.1XP_018453101.1CDX95927.1XP_018453100.1XP_013701536.1XP_013592484.1XP_013649378.1
Match NameE-valueIdentityDescription
gi|585112447|gb|EWM29865.1|0.000e+0100.00s-adenosylmethionine-dependent methyltransferase d... [more]
gi|298711514|emb|CBJ26602.1|5.082e-3446.88conserved unknown protein [Ectocarpus siliculosus][more]
gi|1073004193|ref|XP_018453102.1|1.076e-3246.84PREDICTED: methyltransferase-like protein 7B isofo... [more]
gi|1190957753|ref|XP_020889786.1|1.525e-3243.98LOW QUALITY PROTEIN: methyltransferase-like protei... [more]
gi|1073004191|ref|XP_018453101.1|1.691e-3246.84PREDICTED: methyltransferase-like protein 7A isofo... [more]
gi|674937275|emb|CDX95927.1|2.206e-3244.91BnaA07g28040D [Brassica napus][more]
gi|1073004189|ref|XP_018453100.1|2.329e-3246.84PREDICTED: methyltransferase-like protein 7B isofo... [more]
gi|923843346|ref|XP_013701536.1|2.922e-3247.47PREDICTED: methyltransferase-like protein 7A [Bras... [more]
gi|922514178|ref|XP_013592484.1|3.207e-3248.13PREDICTED: methyltransferase-like protein 7A [Bras... [more]
gi|923667026|ref|XP_013649378.1|4.365e-3247.50PREDICTED: methyltransferase-like protein 7B [Bras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna791rna791Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications