EWM30554.1, cds79 (CDS) Nannochloropsis gaditana

Overview
NameEWM30554.1
Unique Namecds79
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:220372..220686 +
Alignment locationCM002455.1:221027..221773 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30554.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100033g3.8393.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:220372..220686 +
CM002455.1supercontigCM002455.1:221027..221773 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30554.1 vs. NCBI_GenBank
Match: gi|585113221|gb|EWM30554.1| (hypothetical protein Naga_100033g3 [Nannochloropsis gaditana])

HSP 1 Score: 696.041 bits (1795), Expect = 0.000e+0
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0 
Query:    1 MRYQLKNMHFVPCYFSLLFYFRSGEVVRHPFPRSTSGMDGKANKDSTELCRRRKEEQLGQDRARDKEAAENGDALGEEEEILVMVDLPEYAGVALFEEAESIEIKNIAGPGAPELVVNGVRNFKGHYEDPLGSSLIVNDHRIDHTCIRQGARKKGRPRSESLEEELREKEKNFTGEGLGGKEICGEEVGNDGRRSWKGARRELWNGRDRGKERVERNCEGTGERDDGGRKEQGEMEPAALSIASKVLVFLEERHSRGSALMDQDGMSRRRERKGAWDTRGEQGNERDGTEEEEVGREEEDEEGREEEEAGGEAEDEEEDDEDYDDEEDNEDNEDDDDDDEDGEVAEEEEDEDD 353
            MRYQLKNMHFVPCYFSLLFYFRSGEVVRHPFPRSTSGMDGKANKDSTELCRRRKEEQLGQDRARDKEAAENGDALGEEEEILVMVDLPEYAGVALFEEAESIEIKNIAGPGAPELVVNGVRNFKGHYEDPLGSSLIVNDHRIDHTCIRQGARKKGRPRSESLEEELREKEKNFTGEGLGGKEICGEEVGNDGRRSWKGARRELWNGRDRGKERVERNCEGTGERDDGGRKEQGEMEPAALSIASKVLVFLEERHSRGSALMDQDGMSRRRERKGAWDTRGEQGNERDGTEEEEVGREEEDEEGREEEEAGGEAEDEEEDDEDYDDEEDNEDNEDDDDDDEDGEVAEEEEDEDD
Sbjct:    1 MRYQLKNMHFVPCYFSLLFYFRSGEVVRHPFPRSTSGMDGKANKDSTELCRRRKEEQLGQDRARDKEAAENGDALGEEEEILVMVDLPEYAGVALFEEAESIEIKNIAGPGAPELVVNGVRNFKGHYEDPLGSSLIVNDHRIDHTCIRQGARKKGRPRSESLEEELREKEKNFTGEGLGGKEICGEEVGNDGRRSWKGARRELWNGRDRGKERVERNCEGTGERDDGGRKEQGEMEPAALSIASKVLVFLEERHSRGSALMDQDGMSRRRERKGAWDTRGEQGNERDGTEEEEVGREEEDEEGREEEEAGGEAEDEEEDDEDYDDEEDNEDNEDDDDDDEDGEVAEEEEDEDD 353
The following BLAST results are available for this feature:
BLAST of EWM30554.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113221|gb|EWM30554.1|0.000e+0100.00hypothetical protein Naga_100033g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna79rna79Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications