EWM22779.1, cds7895 (CDS) Nannochloropsis gaditana

Overview
NameEWM22779.1
Unique Namecds7895
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:89618..90156 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22779.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101581g1.2307.mrna
GbkeyCDS
End range.
End range90156
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:89618..90156 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22779.1 vs. NCBI_GenBank
Match: gi|585103388|gb|EWM22779.1| (hypothetical protein Naga_101581g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 366.311 bits (939), Expect = 3.556e-128
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 
Query:    1 MSVPAPSSPPPSSSSGSRASHSEDNSMVVVPSRVLFTTSLGNVVHAEEGEGGEGHSGGRKQRYRRKGYTITEEDLDGNVVRVTRAPPARKRRRSNTGKEEETTMVWTAREGAEETTGAEPSHLHGQCELGDEGQGGDRGACLRQLHPEEGRFQQQEGLHVLAWSFHNPQRTQQPGVQVPL 180
            MSVPAPSSPPPSSSSGSRASHSEDNSMVVVPSRVLFTTSLGNVVHAEEGEGGEGHSGGRKQRYRRKGYTITEEDLDGNVVRVTRAPPARKRRRSNTGKEEETTMVWTAREGAEETTGAEPSHLHGQCELGDEGQGGDRGACLRQLHPEEGRFQQQEGLHVLAWSFHNPQRTQQPGVQVPL
Sbjct:    1 MSVPAPSSPPPSSSSGSRASHSEDNSMVVVPSRVLFTTSLGNVVHAEEGEGGEGHSGGRKQRYRRKGYTITEEDLDGNVVRVTRAPPARKRRRSNTGKEEETTMVWTAREGAEETTGAEPSHLHGQCELGDEGQGGDRGACLRQLHPEEGRFQQQEGLHVLAWSFHNPQRTQQPGVQVPL 180
The following BLAST results are available for this feature:
BLAST of EWM22779.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103388|gb|EWM22779.1|3.556e-128100.00hypothetical protein Naga_101581g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7917rna7917Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications