EWM22780.1, cds7893 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|585103391|gb|EWM22780.1| (NMT1/THI5-like protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 305.449 bits (781), Expect = 4.750e-105 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 Query: 1 MPILFQKDVTFMPRPRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLADSLSLAQRLLHQAVGSS 153 MPILFQKDVTFMPRPRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLADSLSLAQRLLHQAVGSS Sbjct: 1 MPILFQKDVTFMPRPRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLADSLSLAQRLLHQAVGSS 153
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|938302539|gb|KPQ36054.1| (ABC-type uptake system substrate-binding component [Phormidesmis priestleyi Ana]) HSP 1 Score: 75.0998 bits (183), Expect = 4.106e-13 Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 0 Query: 13 PRPRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVL----RGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLADSLSL 141 P+ + Q D++ + QFAGL++A + L+ +G+D+ L G V P D VA +GCAEQN+++ AQA GAP++ V+ M+ SPLGL LP ++I +L +L R +VGM D L++ Sbjct: 36 PQTSLTMQLDWKF-NVQFAGLLLAKGAELYADQGLDVTLMPWESGVVVP----DKVAA--------DPTVIGCAEQNLILAAQAAGAPIKAVATMFQASPLGLMTLPDAQIATLDDL--RGKKVGMHVDGLAV 153
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|495331561|ref|WP_008056299.1| (hypothetical protein [Arthrospira sp. PCC 8005] >gi|375324614|emb|CCE19962.1| conserved hypothetical protein [Arthrospira sp. PCC 8005] >gi|585308643|emb|CDM98466.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]) HSP 1 Score: 74.7146 bits (182), Expect = 5.841e-13 Identity = 44/128 (34.38%), Postives = 76/128 (59.38%), Query Frame = 0 Query: 16 RVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLADSLSLAQ 143 ++ Q D++ ++QFAG+++A L++S G L ++RPG A +V + + G +GC EQ+I++ AQ G P++ ++ M+ SPLGL +P S+I L++L + RVGM +S S+ Q Sbjct: 41 KIIMQLDWKY-NAQFAGVLLADYYNLYKSSG----LAVEIRPGETAMIVT--NQVAKNPG--IIGCGEQDIIMNAQIAGQPIKAIATMFQNSPLGLMSMPNSQIYDLQDLIGK--RVGMEGESYSIMQ 157
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|1180096530|ref|WP_083616258.1| (hypothetical protein [Planktothrix paucivesiculata] >gi|1108760673|emb|CUR11669.1| conserved hypothetical protein [Planktothrix paucivesiculata PCC 9631]) HSP 1 Score: 73.9442 bits (180), Expect = 9.135e-13 Identity = 45/130 (34.62%), Postives = 72/130 (55.38%), Query Frame = 0 Query: 8 DVTFMPRPRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLAD 137 D+ P + Q D++ + QFAGL++A GL+Q RG L+ ++ P + +V I E L LGC EQ++++ AQ G PV+ ++ M+ SPLGL +P + I SL +L + +VG+ D Sbjct: 35 DIIPTLTPHLTMQLDWKY-NVQFAGLLLADYYGLYQQRG----LKVEILPVNSQNVFEQIAE-----NPLILGCGEQDVILAAQVQGYPVKAIATMFQTSPLGLMSIPQNNIHSLNDLVGK--KVGIHGD 152
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|493672190|ref|WP_006622523.1| (MULTISPECIES: hypothetical protein [Arthrospira] >gi|209494122|gb|EDZ94437.1| NMT1/THI5 like domain protein [Arthrospira maxima CS-328] >gi|406714362|gb|EKD09528.1| hypothetical protein SPLC1_S180010 [Arthrospira platensis C1] >gi|1015660419|gb|AMW26781.1| hypothetical protein AP285_00995 [Arthrospira platensis YZ]) HSP 1 Score: 73.9442 bits (180), Expect = 1.002e-12 Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 0 Query: 16 RVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLADSLSLAQ 143 ++ Q D++ ++QFAG+++A L++S G L ++RPG A +V Q A + +GC EQ+I++ AQ G P++ ++ M+ SPLGL +P S+I L++L + RVGM +S S+ Q Sbjct: 41 QIIMQLDWKY-NAQFAGVLLADYYNLYKSSG----LAVEIRPGETAMIVTN-QVA---KNPAIIGCGEQDIIMNAQIAGQPIKAIATMFQNSPLGLMSMPNSQIYDLQDLIGK--RVGMEGESYSIMQ 157
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|1180105166|ref|WP_083624879.1| (hypothetical protein [Planktothrix serta] >gi|1108764263|emb|CUR19986.1| conserved hypothetical protein [Planktothrix serta PCC 8927]) HSP 1 Score: 73.1738 bits (178), Expect = 1.981e-12 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 0 Query: 8 DVTFMPRPRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLADS 138 D+ P + Q D++ + QFAGL++A GL+Q RG+++ ++ ++ GI E V + L LGC EQ+ ++ AQ G P++ ++ M+ SPLGL LP I SL +L + +VGM ++ Sbjct: 28 DLNLSPTAPLIMQLDWKY-NVQFAGLLLADYYGLYQQRGLEVEIKS-------VNLHRGIFEQVAENP-LILGCGEQDAILAAQVQGYPIKAIATMFQASPLGLMSLPEKNIQSLHDLVGQ--KVGMQGNT 147
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|493667537|ref|WP_006617879.1| (hypothetical protein [Arthrospira platensis] >gi|291565826|dbj|BAI88098.1| putative secreted protein [Arthrospira platensis NIES-39] >gi|647981301|gb|KDR58233.1| hypothetical protein APPUASWS_006285 [Arthrospira platensis str. Paraca]) HSP 1 Score: 72.4034 bits (176), Expect = 3.515e-12 Identity = 45/139 (32.37%), Postives = 80/139 (57.55%), Query Frame = 0 Query: 16 RVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKELAQRQMRVGMLADSLSLAQRLL-HQAVGSS 153 ++ Q D++ ++QFAG+++A L++S G L ++ PG A +V V + + +GC EQ+I++ AQ G P++ ++ M+ SPLGL +P S+I L++L + RV M +S S+ Q ++ H +GS Sbjct: 41 QIIMQLDWKY-NAQFAGVLLADYYNLYKSSG----LAVEILPGETAMIVTN---QVAENPAM-IGCGEQDIIMNAQIAGKPIKAIATMFQNSPLGLMSMPNSQIYDLQDLIGK--RVAMQGESYSIMQMVMGHNNIGSD 168
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|1160831838|ref|WP_079677636.1| (hypothetical protein [Planktothrix sp. PCC 11201] >gi|1152219089|emb|SKB11454.1| conserved hypothetical protein [Planktothrix sp. PCC 11201]) HSP 1 Score: 71.633 bits (174), Expect = 7.563e-12 Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 0 Query: 15 PRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKEL 125 P + Q D++ + QFAGL++A L+Q RG L+ ++ P + +V I E L LGC EQ++++ AQ G PV+ ++ M+ SPLGL +P + I SL +L Sbjct: 43 PHLTMQLDWKY-NVQFAGLLLADYYNLYQQRG----LKVEILPANSQNVFEQIAE-----NPLILGCGEQDVILAAQVQGYPVKAIATMFQTSPLGLMSIPQNNIHSLNDL 143
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|1101224894|gb|OIP73132.1| (hypothetical protein AUK43_01285 [Oscillatoriales cyanobacterium CG2_30_40_61]) HSP 1 Score: 71.2478 bits (173), Expect = 1.044e-11 Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 0 Query: 8 DVTFMPRPRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKEL 125 D+ P + Q D++ + QFAGL++A GL++ RG+++ ++ P + +V I E L LGC EQ+I++ AQ G PV+ ++ M+ SPLGL +P I SL +L Sbjct: 35 DIIPTSTPHLTIQLDWKY-NVQFAGLLLADYYGLYKQRGLNV----EILPVNSQNVFEQIAE-----NPLILGCGEQDIILAAQVQGYPVKAIATMFQTSPLGLMSIPEKNIHSLYDL 142
BLAST of EWM22780.1 vs. NCBI_GenBank
Match: gi|1206271688|ref|WP_087882151.1| (hypothetical protein [Planktothrix rubescens]) HSP 1 Score: 69.3218 bits (168), Expect = 4.929e-11 Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 0 Query: 8 DVTFMPRPRVFFQGDYELLSSQFAGLVVAAKSGLFQSRGIDLVLRGKVRPGSEADVVAGIQEAVGDRGNLALGCAEQNIVVPAQAHGAPVQVVSAMYHKSPLGLGLLPTSRITSLKEL 125 D+ P + Q D++ + QFAGL++A L+Q RG L+ ++ P S +V + E L LGC EQ+ ++ AQ G PV+ ++ M+ SPLGL +P I SL +L Sbjct: 44 DIIPTSTPHLTMQLDWKY-NVQFAGLLLADYYKLYQQRG----LKVEILPASSQNVFEQMAE-----NPLILGCGEQDAILAAQVQGYPVKAIATMFQASPLGLMSIPEKNIHSLNDL 151 The following BLAST results are available for this feature:
BLAST of EWM22780.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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