EWM22781.1, cds7892 (CDS) Nannochloropsis gaditana

Overview
NameEWM22781.1
Unique Namecds7892
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:85113..85364 -
Alignment locationKK037247.1:84909..84998 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22781.1
Productmethenyltetrahydrofolate cyclohydrolase
Orig transcript idgnl|cribi|Naga_101401g1.1531.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:85113..85364 -
KK037247.1supercontigKK037247.1:84909..84998 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004488methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0055114oxidation-reduction process
GO:0009396folic acid-containing compound biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR020630THF_DH/CycHdrlase_cat_dom
Homology
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BLAST of EWM22781.1 vs. NCBI_GenBank
Match: gi|585103392|gb|EWM22781.1| (methenyltetrahydrofolate cyclohydrolase [Nannochloropsis gaditana])

HSP 1 Score: 223.016 bits (567), Expect = 1.308e-73
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 
Query:    1 MPRGLPVASAMTAIQRVLGRSVLARTVALPHDRRLSIPVLRRKGSIMGYVFPESSEEIYPPGNGPRILDGRMLSRRIRAGIKAQVKIFKEEHGYVPHLAIITVGERPPEEAER 113
            MPRGLPVASAMTAIQRVLGRSVLARTVALPHDRRLSIPVLRRKGSIMGYVFPESSEEIYPPGNGPRILDGRMLSRRIRAGIKAQVKIFKEEHGYVPHLAIITVGERPPEEAER
Sbjct:    1 MPRGLPVASAMTAIQRVLGRSVLARTVALPHDRRLSIPVLRRKGSIMGYVFPESSEEIYPPGNGPRILDGRMLSRRIRAGIKAQVKIFKEEHGYVPHLAIITVGERPPEEAER 113
The following BLAST results are available for this feature:
BLAST of EWM22781.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103392|gb|EWM22781.1|1.308e-73100.00methenyltetrahydrofolate cyclohydrolase [Nannochlo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7914rna7914Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications