EWM22783.1, cds7890 (CDS) Nannochloropsis gaditana

Overview
NameEWM22783.1
Unique Namecds7890
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:82385..82687 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22783.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100958g2.9902.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:82385..82687 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22783.1 vs. NCBI_GenBank
Match: gi|585103397|gb|EWM22783.1| (hypothetical protein Naga_100958g2 [Nannochloropsis gaditana])

HSP 1 Score: 203.371 bits (516), Expect = 2.633e-66
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query:    1 MTLVRRMWKVVKKKERLSGAHVVPGYGTCGGKEKRERSMIVKVGVVFKRARSMQTGPKRAPAWPISGCFGGEAKEDLKVTIEKLRDSNGPHSEMVTVETT 100
            MTLVRRMWKVVKKKERLSGAHVVPGYGTCGGKEKRERSMIVKVGVVFKRARSMQTGPKRAPAWPISGCFGGEAKEDLKVTIEKLRDSNGPHSEMVTVETT
Sbjct:    1 MTLVRRMWKVVKKKERLSGAHVVPGYGTCGGKEKRERSMIVKVGVVFKRARSMQTGPKRAPAWPISGCFGGEAKEDLKVTIEKLRDSNGPHSEMVTVETT 100          
The following BLAST results are available for this feature:
BLAST of EWM22783.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103397|gb|EWM22783.1|2.633e-66100.00hypothetical protein Naga_100958g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7912rna7912Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications