EWM22796.1, cds7877 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|585103417|gb|EWM22796.1| (septin 7, partial [Nannochloropsis gaditana]) HSP 1 Score: 343.584 bits (880), Expect = 1.260e-119 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MTAEETLAFRSFVFEACQHHAIRLFDFGSEAKRRVGIPTDLVAPPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYRCSYYQEKEEEARASRAKAEKQRQFGWLLVAVLLLMGAAHAVFARLAGREGGRDGG 166
MTAEETLAFRSFVFEACQHHAIRLFDFGSEAKRRVGIPTDLVAPPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYRCSYYQEKEEEARASRAKAEKQRQFGWLLVAVLLLMGAAHAVFARLAGREGGRDGG
Sbjct: 1 MTAEETLAFRSFVFEACQHHAIRLFDFGSEAKRRVGIPTDLVAPPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYRCSYYQEKEEEARASRAKAEKQRQFGWLLVAVLLLMGAAHAVFARLAGREGGRDGG 166
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|545369551|ref|XP_005649519.1| (hypothetical protein COCSUDRAFT_83668 [Coccomyxa subellipsoidea C-169] >gi|384251497|gb|EIE24975.1| hypothetical protein COCSUDRAFT_83668 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 96.6709 bits (239), Expect = 3.204e-20 Identity = 57/117 (48.72%), Postives = 64/117 (54.70%), Query Frame = 0
Query: 1 MTAEETLAFRSFVFEACQHHAIR-----LFDFGSEAKRRVGIPTDLVAPPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYRC 112
MT EE FR V E H + L F EA G D APPFAVVAS D G FWPVR Y WGTCEA S+ HSD LK+LL EEG+ +L+ ATE+RY YR
Sbjct: 305 MTVEELRDFRRHVQEQLAHAGKKHKKDLLHAFSEEALDAAGARRD--APPFAVVASTTMD--LSVGRFWPVRKYPWGTCEALSSVHSDVGALKRLLFEEGYEELKAATEDRYYHYRS 417
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|552812710|ref|XP_005843766.1| (hypothetical protein CHLNCDRAFT_54927 [Chlorella variabilis] >gi|307103404|gb|EFN51664.1| hypothetical protein CHLNCDRAFT_54927 [Chlorella variabilis]) HSP 1 Score: 80.4925 bits (197), Expect = 1.044e-14 Identity = 49/115 (42.61%), Postives = 63/115 (54.78%), Query Frame = 0
Query: 1 MTAEETLAFRSFVFEACQHHAIRL---FDFGSEAKRRVGIPTDLVAPPFAVVASNQFD-EVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYR 111
MTAEE FR V + + ++ D EA R G PPFAV+ SN D EV G FWPVR Y WG+ EA T+HSD L++LL E G+ +L+ TE+R+ YR
Sbjct: 263 MTAEELKEFRHRVRDGLRRERMKSPFSHDALEEAGARHG-------PPFAVIGSNTMDLEV---GRFWPVRRYPWGSVEAMLTQHSDLPVLRRLLFETGYLELKDGTEQRFHEYR 367
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|302829545|ref|XP_002946339.1| (hypothetical protein VOLCADRAFT_102935 [Volvox carteri f. nagariensis] >gi|300268085|gb|EFJ52266.1| hypothetical protein VOLCADRAFT_102935 [Volvox carteri f. nagariensis]) HSP 1 Score: 75.0998 bits (183), Expect = 8.572e-13 Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 0
Query: 19 HHAIRLFDFGSEAKRRVGIPTDLVA-PPFAVVASNQFDEVKGSGS---FWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYRCS 113
H I +F F + R G+ PPF VVASN E + FWP R Y WGT EAF+ EHSD ++ LL++E ++ + +RY A+R S
Sbjct: 290 HDKINVFKFERDTLERAGVQDQATPHPPFLVVASNDISEELAAAEPPLFWPERRYPWGTAEAFNKEHSDLLAVRALLMKEALEEISKTKRQRYEAWRRS 388
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|760449073|ref|XP_011401605.1| (Septin-7 [Auxenochlorella protothecoides] >gi|675356131|gb|KFM28571.1| Septin-7 [Auxenochlorella protothecoides]) HSP 1 Score: 73.1738 bits (178), Expect = 4.633e-12 Identity = 34/68 (50.00%), Postives = 41/68 (60.29%), Query Frame = 0
Query: 44 PPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYR 111
PPFAVV S D G FWPVR Y WG EA T HSD L++LL E F DL++ T+ RY+ +R
Sbjct: 313 PPFAVVGSRDMD--LAVGRFWPVRRYPWGRVEALLTRHSDLPALRRLLFEAAFEDLKENTDARYLDFR 378
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|51849620|dbj|BAD42341.1| (CDC10 cell division cycle 10 homolog [Nannochloris bacillaris]) HSP 1 Score: 73.1738 bits (178), Expect = 5.148e-12 Identity = 42/111 (37.84%), Postives = 57/111 (51.35%), Query Frame = 0
Query: 1 MTAEETLAFRSFVFEACQHHAIRLFDFGSEAKRRVGIPTDLVAPPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYR 111
MT EE +R V A H I + F EA G PPFAVV ++ D + G FWPVR Y WG CE+ T HS+ L++LL E + +L+ T++ Y +R
Sbjct: 467 MTPEELHVYRHEVHAALHRHGI--WHFSHEALSAAGAQH---GPPFAVVGADTID--RSVGRFWPVRRYPWGKCESLLTAHSELPILRRLLFETAYWELKANTDKEYHKFR 570
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|298709918|emb|CBJ31643.1| (Sept3, septin GTPase [Ectocarpus siliculosus]) HSP 1 Score: 72.4034 bits (176), Expect = 7.442e-12 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 0
Query: 1 MTAEETLAFRSFVFE-ACQHHAIRLFDFG----SEAKRRVGIPTDLV-------APPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAY 110
MT +E F++ + + A Q ++ F F +E K +G PTD PP+AV++S + +G S P R Y WGTC T HSD TYL+ LLLE GF D+++ + RY A+
Sbjct: 205 MTVDEMKEFKTAIVDLAAQDDQLKFFQFSETSWNECKGALG-PTDPPNWLGERQPPPYAVISSKVDESHRGIRS--PARRYPWGTCHVMETAHSDNTYLQCLLLEVGFQDMKKEMKTRYKAF 323
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|298709916|emb|CBJ31641.1| (Sept5, septin GTPase, incomplete sequence [Ectocarpus siliculosus]) HSP 1 Score: 71.2478 bits (173), Expect = 1.844e-11 Identity = 47/135 (34.81%), Postives = 70/135 (51.85%), Query Frame = 0
Query: 1 MTAEETLAFR-SFVFEACQHHAIRLFDFGSEAKRR----VGIPTDLV------APPFAVVASNQFDEVKGSG-SFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYRCSYYQEKEEEAR 123
MT +E + F+ + V A Q + + F+F A + + I + + PP+AV++S Q D+ G+ + PVR Y WG C EHSD TYL+ LLLE GF D++ +RY A+ K EEA+
Sbjct: 146 MTVDEMIGFKKAIVDSAAQANGVEFFNFSERAWGKCLGALNIADEPIWLGERRPPPYAVISS-QVDDPNGNAHAPDPVRRYPWGDCHVMRPEHSDNTYLQCLLLEVGFQDMKDEMRKRYEAF-------KTEEAK 272
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|299115179|emb|CBN74010.1| (Sept2, septin GTPase [Ectocarpus siliculosus]) HSP 1 Score: 70.8626 bits (172), Expect = 2.258e-11 Identity = 54/176 (30.68%), Postives = 81/176 (46.02%), Query Frame = 0
Query: 1 MTAEETLAFRSFVFE-ACQHHAIRLFDFGSEAKRR----VGIPTDLV------APPFAVVASNQFDEVKGSG-SFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYR-------CSYYQEKEEEARASRAKAEKQRQFGWL-----LVAVLLLMGAAHAV 152
MT +E F+ + + A + + + F F A + + I + + PP+AV++S Q D+ G+ + PVR Y WG C EHSD TYL+ LLLE GF D++ +RY A++ + EK E R + A + L VAV+L HAV
Sbjct: 194 MTVDEMFDFKKAIADSAAKANGLEFFTFSERAWEKCLAALNIADEPIWLGERRPPPYAVISS-QVDDPNGNAHAHDPVRRYPWGECHVMRPEHSDNTYLQCLLLEVGFQDMKDKMRKRYEAFKKQEAKPLVTRVGEKNREYRLAIASGKPSTILVVLAVIFAFVAVILAATQVHAV 368
BLAST of EWM22796.1 vs. NCBI_GenBank
Match: gi|159472066|ref|XP_001694177.1| (septin-like protein [Chlamydomonas reinhardtii] >gi|158277344|gb|EDP03113.1| septin-like protein [Chlamydomonas reinhardtii]) HSP 1 Score: 70.4774 bits (171), Expect = 3.592e-11 Identity = 36/97 (37.11%), Postives = 50/97 (51.55%), Query Frame = 0
Query: 19 HHAIRLFDFGSEAKRRVGIPTDLVA-PPFAVVASNQFDEVKGSGS---FWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYR 111
H I +F F + R G+ PPF V+ASN E + FWP R Y WGT EAF+ EHSD ++ LL++E ++ + RY A+R
Sbjct: 292 HDKINIFKFERDTLERAGVQDHATPHPPFLVIASNDISEELAAAEPPLFWPERRYPWGTAEAFNKEHSDLLAVRALLMKEALEEISKTKRARYEAWR 388 The following BLAST results are available for this feature:
BLAST of EWM22796.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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