EWM22799.1, cds7875 (CDS) Nannochloropsis gaditana

Overview
NameEWM22799.1
Unique Namecds7875
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:55228..55903 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22799.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100178g1.3204.mrna
GbkeyCDS
End range.
End range55903
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:55228..55903 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22799.1 vs. NCBI_GenBank
Match: gi|585103422|gb|EWM22799.1| (hypothetical protein Naga_100178g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 462.611 bits (1189), Expect = 6.351e-165
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0 
Query:    1 MATLSREEDGTQPELSREWSKEEMREEDLNDSSYMGVMSFHSQGGPMDEERVAGDAGGRLKRTKASTSRPFPPSHTVLYHNQGHGFEDESNLSASSLTSLSLPSPSSSALAPFQGRDSSLQGESGPGRAPHEHLSSNDVSATAMESMQTEAVGTVPPAESMGDEYKRMAAQKAQRERRYQALVTSKEHARRNFPRMRRIYTDYHLKVMVAGEAGHGKTTCVREEG 225
            MATLSREEDGTQPELSREWSKEEMREEDLNDSSYMGVMSFHSQGGPMDEERVAGDAGGRLKRTKASTSRPFPPSHTVLYHNQGHGFEDESNLSASSLTSLSLPSPSSSALAPFQGRDSSLQGESGPGRAPHEHLSSNDVSATAMESMQTEAVGTVPPAESMGDEYKRMAAQKAQRERRYQALVTSKEHARRNFPRMRRIYTDYHLKVMVAGEAGHGKTTCVREEG
Sbjct:    1 MATLSREEDGTQPELSREWSKEEMREEDLNDSSYMGVMSFHSQGGPMDEERVAGDAGGRLKRTKASTSRPFPPSHTVLYHNQGHGFEDESNLSASSLTSLSLPSPSSSALAPFQGRDSSLQGESGPGRAPHEHLSSNDVSATAMESMQTEAVGTVPPAESMGDEYKRMAAQKAQRERRYQALVTSKEHARRNFPRMRRIYTDYHLKVMVAGEAGHGKTTCVREEG 225
The following BLAST results are available for this feature:
BLAST of EWM22799.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103422|gb|EWM22799.1|6.351e-165100.00hypothetical protein Naga_100178g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7897rna7897Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications