EWM22800.1, cds7872 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|585103423|gb|EWM22800.1| (hypothetical protein Naga_100178g4 [Nannochloropsis gaditana]) HSP 1 Score: 499.204 bits (1284), Expect = 7.861e-179 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query: 1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP
Sbjct: 1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|553183520|ref|XP_005853913.1| (hypothetical protein NGA_0460801 [Nannochloropsis gaditana CCMP526] >gi|422295149|gb|EKU22448.1| hypothetical protein NGA_0460801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 492.656 bits (1267), Expect = 3.309e-175 Identity = 231/238 (97.06%), Postives = 236/238 (99.16%), Query Frame = 0
Query: 1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
MKVLQKRFWQEPLEPIWQYRGKYYLGKTND+EDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVR +AADLKQGYTPEGVK+ILHIYY+YIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYAL+DKIIADGTYKLIDEMFVEIHYNHPEM KFGWQMFHKSRNDAQALFTKARDVGMYIHPWP
Sbjct: 70 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDIEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRGTAADLKQGYTPEGVKEILHIYYNYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALLDKIIADGTYKLIDEMFVEIHYNHPEMHKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 307
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|553189189|ref|XP_005854949.1| (hypothetical protein NGA_0359401 [Nannochloropsis gaditana CCMP526] >gi|422294112|gb|EKU21412.1| hypothetical protein NGA_0359401 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 294.664 bits (753), Expect = 3.805e-97 Identity = 131/239 (54.81%), Postives = 187/239 (78.24%), Query Frame = 0
Query: 1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDL-SNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
+++ ++RFW +PLEPI+QYR K++LGKT+DV+DKDQVTP+FLANFVNASD VY R+IYIDLG+ DF SS+CW+MQNYP KFD ++GFE + L +++ L+S I CV+ ++A+ + GY V + YY+++G ++N + PPTRGLSQ ++D+ I+++D+VV+KMDVE EY ++ +I+ DGTYK +DE+FVE+HYNHPEM + W +F SR + QAL T+ARD+GM+IHPWP
Sbjct: 64 VEIHERRFWLDPLEPIFQYRPKFWLGKTDDVDDKDQVTPYFLANFVNASDKNVYDRRIYIDLGLHDFKSSVCWMMQNYPTKFDLVYGFEADAKLHADIHTLASNITECVKGTSAEAR-GYKTHEVLNTFTFYYNFVGAEDNNKSSPPTRGLSQFVRDIGIKENDFVVLKMDVEGWEYDILSRIMDDGTYKFLDEVFVEVHYNHPEMHPWHWYIFKHSRAEIQALLTRARDLGMFIHPWP 301
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|585100653|gb|EWM20773.1| (Methyltransferase FkbM [Nannochloropsis gaditana]) HSP 1 Score: 293.508 bits (750), Expect = 1.381e-96 Identity = 130/239 (54.39%), Postives = 186/239 (77.82%), Query Frame = 0
Query: 1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDL-SNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
+++ ++RFW +PLEPI+QYR K++LGKT+DV+DKDQVTP+FLANFVNASD VY R+IYIDLG+ DF SS+CW+MQNYP KFD ++GFE L +++ L+S I CV+ ++A+ + GY V + YY+++G ++N + PPTRGLSQ ++D+ I+++D+VV+KMDVE EY ++ +++ DGTYK +DE+FVE+HYNHPEM + W +F SR + QAL T+ARD+GM+IHPWP
Sbjct: 72 VEIHERRFWLDPLEPIFQYRPKFWLGKTDDVDDKDQVTPYFLANFVNASDKNVYDRRIYIDLGLHDFKSSVCWMMQNYPTKFDLVYGFEADGALHADIHTLASNITECVKGTSAEAR-GYKTHEVLNTFTFYYNFVGAEDNNKSSPPTRGLSQFVRDIGIKENDFVVLKMDVEGWEYDILSRVMDDGTYKFLDEVFVEVHYNHPEMHPWHWYIFKHSRAEIQALLTRARDLGMFIHPWP 309
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|971519237|dbj|GAQ79019.1| (hypothetical protein KFL_000220530 [Klebsormidium nitens]) HSP 1 Score: 121.709 bits (304), Expect = 2.086e-29 Identity = 78/231 (33.77%), Postives = 114/231 (49.35%), Query Frame = 0
Query: 13 LEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRG---LSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKII-ADGTYKLIDEMFVEIHYNHPEMRKFGWQMFH-KSRNDAQALFTKARDVGMYIHPWP 238
L P Q+R Y G+T+D ED + P+ L N V+ + + R++++DLG F SS W M+NYPV FD IH FE DL E D+ G P ++ Y +G + T G L + +L I ++D ++VKMD+E E+ ++ ++ A +LIDE+FVE HY P MR GW F+ K DA +L + R G+ H WP
Sbjct: 116 LHPELQFRPGYAHGQTDDCEDPSYLIPWLLGNQVDLNSAS---RRVFLDLGAAAFNSSTGWFMRNYPVDFDEIHAFEVVPDLF--------------EPPYDVI-GALPH--PPVVTQYEMMVGVSDEANTSLGVPGVDILRFITGELRIREEDTLIVKMDIEGGEWEVLPALLEAPAVLRLIDELFVETHYGDPIMRACGWDQFYPKKLEDALSLVNQLRQAGLRTHFWP 326
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|168056594|ref|XP_001780304.1| (predicted protein [Physcomitrella patens] >gi|162668252|gb|EDQ54863.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 121.324 bits (303), Expect = 3.781e-29 Identity = 74/233 (31.76%), Postives = 115/233 (49.36%), Query Frame = 0
Query: 11 EPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNV--AALSSQIDACVRESAADLKQGY--TPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIAD-GTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
E L+P +R + L T+DVEDK + P+ V+ + A R++Y+DLG F +S+ W Q YP F IH FE + L + + + + + S A + P + D + Y ++ ++ + TR + + DL + DD VVVKMD+E E+ ++ + + D +IDE+FVEIHY H M + W F SR +A L R G +IH WP
Sbjct: 111 EALDPRNNFRRGFSLKFTSDVEDKTAILPWLYGAKVDLNKRA---RRVYLDLGANSFRTSVTWFSQMYPCDFTEIHAFEVSPQLFKIPSSGFNEETNWVPENSHATRVKTAPGVPNWMLDRIKTYNTFVSDGDDEKSTNITRFIKE---DLQLTADDAVVVKMDIEGAEWPILKRWLLDLEMANIIDELFVEIHYRHNTMLDYHWGQFSHSREEATRLIASLRAKGYFIHAWP 337
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|168000565|ref|XP_001752986.1| (predicted protein [Physcomitrella patens] >gi|162695685|gb|EDQ82027.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 122.865 bits (307), Expect = 8.324e-29 Identity = 72/234 (30.77%), Postives = 128/234 (54.70%), Query Frame = 0
Query: 11 EPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALS-SQIDACVRESAADLKQGY--TPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKD-LNIEKDDYVVVKMDVEEMEYALIDKIIADGTY-KLIDEMFVEIHYNHPEMRKFGWQMFH-KSRNDAQALFTKARDVGMYIHPWP 238
E L+ ++ +R Y L DVEDK + P+ L N V+ + P +R++ +DLG F +S+ W + YP F +H FE +L + + + SA+ + + P+ + D + +Y ++ ++P+T +++ M + L+++ D VVVKMD+E E++++ + +A+ +++DE+FVEIHY+H M FGWQ F +R+DA L R G ++H WP
Sbjct: 171 EALDDVYNFRRGYALKYVADVEDKTHILPWLLGNRVDLNLP---RRRVLMDLGGNRFDTSVTWFNRMYPCDFTEVHVFEIDRNLFKFPKEDHEEFNGPFQNSASIMVRNAPPIPKWMIDRMKLYNVFVSDGDDPSTN--ALNITRFMTETLDLKAADTVVVKMDIEGSEWSILKRWMANPEIPRIVDELFVEIHYSHESMDAFGWQQFKDHTRDDATRLLAALRSKGFFVHAWP 399
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|116788959|gb|ABK25064.1| (unknown [Picea sitchensis]) HSP 1 Score: 118.627 bits (296), Expect = 5.723e-28 Identity = 73/229 (31.88%), Postives = 120/229 (52.40%), Query Frame = 0
Query: 18 QYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDL---SNVAALSSQID-ACVRESAADLKQG-YTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMK-DLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLI-DEMFVEIHYNHPEMRKFGWQMFHK-SRNDAQALFTKARDVGMYIHPWP 238
+R + L NDVED+ + P+ L + D +R++ +DLG F +SL W ++ YP F IH FE S L N + + A + S+ ++K P+ + D + ++Y ++ ++ A+ +++ MK DL ++ D VVVKMD+E E+ ++ + ++D LI DE+FVE+HYNHP M + W F +R +A+ L R G Y H WP
Sbjct: 147 NFRRGFALRYANDVEDRTHILPWLLPS--KTMDLHHRQRRVLLDLGANAFSTSLTWFLRMYPCDFTEIHAFEVNSKLLRKPNPPGFDEESNVAKMNPSSLNVKATPQPPQWMVDRIQLHYSFVSDGDDKASN--AINITRFMKEDLRLKATDTVVVKMDIEGSEWPILRRWLSDPEMPLIVDELFVEVHYNHPSMWNYHWSRFGDITRENAKELLADLRWHGFYAHFWP 371
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|148908286|gb|ABR17257.1| (unknown [Picea sitchensis]) HSP 1 Score: 118.627 bits (296), Expect = 5.903e-28 Identity = 73/229 (31.88%), Postives = 120/229 (52.40%), Query Frame = 0
Query: 18 QYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDL---SNVAALSSQID-ACVRESAADLKQG-YTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMK-DLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLI-DEMFVEIHYNHPEMRKFGWQMFHK-SRNDAQALFTKARDVGMYIHPWP 238
+R + L NDVED+ + P+ L + D +R++ +DLG F +SL W ++ YP F IH FE S L N + + A + S+ ++K P+ + D + ++Y ++ ++ A+ +++ MK DL ++ D VVVKMD+E E+ ++ + ++D LI DE+FVE+HYNHP M + W F +R +A+ L R G Y H WP
Sbjct: 147 NFRRGFALRYANDVEDRTHILPWLLPS--KTMDLHHRQRRVLLDLGANAFSTSLTWFLRMYPCDFTEIHAFEVNSKLLRKPNPPGFDEESNVAKMNPSSLNVKATPQPPQWMVDRIQLHYSFVSDGDDKASN--AINITRFMKEDLRLKATDTVVVKMDIEGSEWPILRRWLSDPEMPLIVDELFVEVHYNHPSMWNYHWSRFGDITRENAKELLADLRWHGFYAHFWP 371
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|551557366|ref|XP_005765736.1| (hypothetical protein EMIHUDRAFT_256887 [Emiliania huxleyi CCMP1516] >gi|485615819|gb|EOD13307.1| hypothetical protein EMIHUDRAFT_256887 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 115.931 bits (289), Expect = 2.151e-27 Identity = 78/221 (35.29%), Postives = 113/221 (51.13%), Query Frame = 0
Query: 36 QVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYS--SLCWIMQNYP--VKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYY---DYIGTDENPATQPPTRGLSQVMKD-LNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPE-MRKF--------GWQMFHK-SRNDAQALFTKARDVGMYIHPWP 238
+V P +L + N S +R +YID+G ++F S + YP + FD + FE AS L Q D R +QG + ++ +IG NP+T PPT G S ++K L ++ D VVVKMDVE EY ++ ++ADGT+ LIDE+ +E+HY HP MR+F GWQ + S +A A++ RD G+Y H WP
Sbjct: 91 RVPPHYLGHHANFSK---CERSVYIDVGAREFDSKEGMLSTFAVYPQLLGFDEFYAFEAASGFYK---LPPQPDLVRRLQ----RQGMSAARAASFARRHFFLQAFIGARSNPSTTPPTLGFSDLLKTMLGLQPADAVVVKMDVEGYEYDIVRTLLADGTHALIDEILLEVHYGHPAMMRRFNWCRMPKPGWQFWCSYSLQNATAMYRALRDAGVYAHHWP 301 The following BLAST results are available for this feature:
BLAST of EWM22800.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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