EWM22800.1, cds7872 (CDS) Nannochloropsis gaditana

Overview
NameEWM22800.1
Unique Namecds7872
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:52063..52082 +
Alignment locationKK037247.1:52165..52252 +
Alignment locationKK037247.1:52376..52846 +
Alignment locationKK037247.1:52933..53070 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22800.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100178g4.3205.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:52063..52082 +
KK037247.1supercontigKK037247.1:52165..52252 +
KK037247.1supercontigKK037247.1:52376..52846 +
KK037247.1supercontigKK037247.1:52933..53070 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR006342FkbM_mtfrase
Homology
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|585103423|gb|EWM22800.1| (hypothetical protein Naga_100178g4 [Nannochloropsis gaditana])

HSP 1 Score: 499.204 bits (1284), Expect = 7.861e-179
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query:    1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
            MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP
Sbjct:    1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238          
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|553183520|ref|XP_005853913.1| (hypothetical protein NGA_0460801 [Nannochloropsis gaditana CCMP526] >gi|422295149|gb|EKU22448.1| hypothetical protein NGA_0460801 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 492.656 bits (1267), Expect = 3.309e-175
Identity = 231/238 (97.06%), Postives = 236/238 (99.16%), Query Frame = 0
Query:    1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
            MKVLQKRFWQEPLEPIWQYRGKYYLGKTND+EDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVR +AADLKQGYTPEGVK+ILHIYY+YIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYAL+DKIIADGTYKLIDEMFVEIHYNHPEM KFGWQMFHKSRNDAQALFTKARDVGMYIHPWP
Sbjct:   70 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDIEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRGTAADLKQGYTPEGVKEILHIYYNYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALLDKIIADGTYKLIDEMFVEIHYNHPEMHKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 307          
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|553189189|ref|XP_005854949.1| (hypothetical protein NGA_0359401 [Nannochloropsis gaditana CCMP526] >gi|422294112|gb|EKU21412.1| hypothetical protein NGA_0359401 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 294.664 bits (753), Expect = 3.805e-97
Identity = 131/239 (54.81%), Postives = 187/239 (78.24%), Query Frame = 0
Query:    1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDL-SNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
            +++ ++RFW +PLEPI+QYR K++LGKT+DV+DKDQVTP+FLANFVNASD  VY R+IYIDLG+ DF SS+CW+MQNYP KFD ++GFE  + L +++  L+S I  CV+ ++A+ + GY    V +    YY+++G ++N  + PPTRGLSQ ++D+ I+++D+VV+KMDVE  EY ++ +I+ DGTYK +DE+FVE+HYNHPEM  + W +F  SR + QAL T+ARD+GM+IHPWP
Sbjct:   64 VEIHERRFWLDPLEPIFQYRPKFWLGKTDDVDDKDQVTPYFLANFVNASDKNVYDRRIYIDLGLHDFKSSVCWMMQNYPTKFDLVYGFEADAKLHADIHTLASNITECVKGTSAEAR-GYKTHEVLNTFTFYYNFVGAEDNNKSSPPTRGLSQFVRDIGIKENDFVVLKMDVEGWEYDILSRIMDDGTYKFLDEVFVEVHYNHPEMHPWHWYIFKHSRAEIQALLTRARDLGMFIHPWP 301          
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|585100653|gb|EWM20773.1| (Methyltransferase FkbM [Nannochloropsis gaditana])

HSP 1 Score: 293.508 bits (750), Expect = 1.381e-96
Identity = 130/239 (54.39%), Postives = 186/239 (77.82%), Query Frame = 0
Query:    1 MKVLQKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDL-SNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
            +++ ++RFW +PLEPI+QYR K++LGKT+DV+DKDQVTP+FLANFVNASD  VY R+IYIDLG+ DF SS+CW+MQNYP KFD ++GFE    L +++  L+S I  CV+ ++A+ + GY    V +    YY+++G ++N  + PPTRGLSQ ++D+ I+++D+VV+KMDVE  EY ++ +++ DGTYK +DE+FVE+HYNHPEM  + W +F  SR + QAL T+ARD+GM+IHPWP
Sbjct:   72 VEIHERRFWLDPLEPIFQYRPKFWLGKTDDVDDKDQVTPYFLANFVNASDKNVYDRRIYIDLGLHDFKSSVCWMMQNYPTKFDLVYGFEADGALHADIHTLASNITECVKGTSAEAR-GYKTHEVLNTFTFYYNFVGAEDNNKSSPPTRGLSQFVRDIGIKENDFVVLKMDVEGWEYDILSRVMDDGTYKFLDEVFVEVHYNHPEMHPWHWYIFKHSRAEIQALLTRARDLGMFIHPWP 309          
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|971519237|dbj|GAQ79019.1| (hypothetical protein KFL_000220530 [Klebsormidium nitens])

HSP 1 Score: 121.709 bits (304), Expect = 2.086e-29
Identity = 78/231 (33.77%), Postives = 114/231 (49.35%), Query Frame = 0
Query:   13 LEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRG---LSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKII-ADGTYKLIDEMFVEIHYNHPEMRKFGWQMFH-KSRNDAQALFTKARDVGMYIHPWP 238
            L P  Q+R  Y  G+T+D ED   + P+ L N V+ +  +   R++++DLG   F SS  W M+NYPV FD IH FE   DL               E   D+  G  P     ++  Y   +G  +   T     G   L  +  +L I ++D ++VKMD+E  E+ ++  ++ A    +LIDE+FVE HY  P MR  GW  F+ K   DA +L  + R  G+  H WP
Sbjct:  116 LHPELQFRPGYAHGQTDDCEDPSYLIPWLLGNQVDLNSAS---RRVFLDLGAAAFNSSTGWFMRNYPVDFDEIHAFEVVPDLF--------------EPPYDVI-GALPH--PPVVTQYEMMVGVSDEANTSLGVPGVDILRFITGELRIREEDTLIVKMDIEGGEWEVLPALLEAPAVLRLIDELFVETHYGDPIMRACGWDQFYPKKLEDALSLVNQLRQAGLRTHFWP 326          
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|168056594|ref|XP_001780304.1| (predicted protein [Physcomitrella patens] >gi|162668252|gb|EDQ54863.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 121.324 bits (303), Expect = 3.781e-29
Identity = 74/233 (31.76%), Postives = 115/233 (49.36%), Query Frame = 0
Query:   11 EPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNV--AALSSQIDACVRESAADLKQGY--TPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVVKMDVEEMEYALIDKIIAD-GTYKLIDEMFVEIHYNHPEMRKFGWQMFHKSRNDAQALFTKARDVGMYIHPWP 238
            E L+P   +R  + L  T+DVEDK  + P+     V+ +  A   R++Y+DLG   F +S+ W  Q YP  F  IH FE +  L  +  +  + + +     S A   +     P  + D +  Y  ++   ++  +   TR + +   DL +  DD VVVKMD+E  E+ ++ + + D     +IDE+FVEIHY H  M  + W  F  SR +A  L    R  G +IH WP
Sbjct:  111 EALDPRNNFRRGFSLKFTSDVEDKTAILPWLYGAKVDLNKRA---RRVYLDLGANSFRTSVTWFSQMYPCDFTEIHAFEVSPQLFKIPSSGFNEETNWVPENSHATRVKTAPGVPNWMLDRIKTYNTFVSDGDDEKSTNITRFIKE---DLQLTADDAVVVKMDIEGAEWPILKRWLLDLEMANIIDELFVEIHYRHNTMLDYHWGQFSHSREEATRLIASLRAKGYFIHAWP 337          
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|168000565|ref|XP_001752986.1| (predicted protein [Physcomitrella patens] >gi|162695685|gb|EDQ82027.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 122.865 bits (307), Expect = 8.324e-29
Identity = 72/234 (30.77%), Postives = 128/234 (54.70%), Query Frame = 0
Query:   11 EPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALS-SQIDACVRESAADLKQGY--TPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKD-LNIEKDDYVVVKMDVEEMEYALIDKIIADGTY-KLIDEMFVEIHYNHPEMRKFGWQMFH-KSRNDAQALFTKARDVGMYIHPWP 238
            E L+ ++ +R  Y L    DVEDK  + P+ L N V+ + P   +R++ +DLG   F +S+ W  + YP  F  +H FE   +L         + +   + SA+ + +     P+ + D + +Y  ++   ++P+T      +++ M + L+++  D VVVKMD+E  E++++ + +A+    +++DE+FVEIHY+H  M  FGWQ F   +R+DA  L    R  G ++H WP
Sbjct:  171 EALDDVYNFRRGYALKYVADVEDKTHILPWLLGNRVDLNLP---RRRVLMDLGGNRFDTSVTWFNRMYPCDFTEVHVFEIDRNLFKFPKEDHEEFNGPFQNSASIMVRNAPPIPKWMIDRMKLYNVFVSDGDDPSTN--ALNITRFMTETLDLKAADTVVVKMDIEGSEWSILKRWMANPEIPRIVDELFVEIHYSHESMDAFGWQQFKDHTRDDATRLLAALRSKGFFVHAWP 399          
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|116788959|gb|ABK25064.1| (unknown [Picea sitchensis])

HSP 1 Score: 118.627 bits (296), Expect = 5.723e-28
Identity = 73/229 (31.88%), Postives = 120/229 (52.40%), Query Frame = 0
Query:   18 QYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDL---SNVAALSSQID-ACVRESAADLKQG-YTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMK-DLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLI-DEMFVEIHYNHPEMRKFGWQMFHK-SRNDAQALFTKARDVGMYIHPWP 238
             +R  + L   NDVED+  + P+ L +     D    +R++ +DLG   F +SL W ++ YP  F  IH FE  S L    N      + + A +  S+ ++K     P+ + D + ++Y ++   ++ A+      +++ MK DL ++  D VVVKMD+E  E+ ++ + ++D    LI DE+FVE+HYNHP M  + W  F   +R +A+ L    R  G Y H WP
Sbjct:  147 NFRRGFALRYANDVEDRTHILPWLLPS--KTMDLHHRQRRVLLDLGANAFSTSLTWFLRMYPCDFTEIHAFEVNSKLLRKPNPPGFDEESNVAKMNPSSLNVKATPQPPQWMVDRIQLHYSFVSDGDDKASN--AINITRFMKEDLRLKATDTVVVKMDIEGSEWPILRRWLSDPEMPLIVDELFVEVHYNHPSMWNYHWSRFGDITRENAKELLADLRWHGFYAHFWP 371          
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|148908286|gb|ABR17257.1| (unknown [Picea sitchensis])

HSP 1 Score: 118.627 bits (296), Expect = 5.903e-28
Identity = 73/229 (31.88%), Postives = 120/229 (52.40%), Query Frame = 0
Query:   18 QYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDL---SNVAALSSQID-ACVRESAADLKQG-YTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMK-DLNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLI-DEMFVEIHYNHPEMRKFGWQMFHK-SRNDAQALFTKARDVGMYIHPWP 238
             +R  + L   NDVED+  + P+ L +     D    +R++ +DLG   F +SL W ++ YP  F  IH FE  S L    N      + + A +  S+ ++K     P+ + D + ++Y ++   ++ A+      +++ MK DL ++  D VVVKMD+E  E+ ++ + ++D    LI DE+FVE+HYNHP M  + W  F   +R +A+ L    R  G Y H WP
Sbjct:  147 NFRRGFALRYANDVEDRTHILPWLLPS--KTMDLHHRQRRVLLDLGANAFSTSLTWFLRMYPCDFTEIHAFEVNSKLLRKPNPPGFDEESNVAKMNPSSLNVKATPQPPQWMVDRIQLHYSFVSDGDDKASN--AINITRFMKEDLRLKATDTVVVKMDIEGSEWPILRRWLSDPEMPLIVDELFVEVHYNHPSMWNYHWSRFGDITRENAKELLADLRWHGFYAHFWP 371          
BLAST of EWM22800.1 vs. NCBI_GenBank
Match: gi|551557366|ref|XP_005765736.1| (hypothetical protein EMIHUDRAFT_256887 [Emiliania huxleyi CCMP1516] >gi|485615819|gb|EOD13307.1| hypothetical protein EMIHUDRAFT_256887 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 115.931 bits (289), Expect = 2.151e-27
Identity = 78/221 (35.29%), Postives = 113/221 (51.13%), Query Frame = 0
Query:   36 QVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYS--SLCWIMQNYP--VKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYY---DYIGTDENPATQPPTRGLSQVMKD-LNIEKDDYVVVKMDVEEMEYALIDKIIADGTYKLIDEMFVEIHYNHPE-MRKF--------GWQMFHK-SRNDAQALFTKARDVGMYIHPWP 238
            +V P +L +  N S     +R +YID+G ++F S   +      YP  + FD  + FE AS       L  Q D   R      +QG +          ++    +IG   NP+T PPT G S ++K  L ++  D VVVKMDVE  EY ++  ++ADGT+ LIDE+ +E+HY HP  MR+F        GWQ +   S  +A A++   RD G+Y H WP
Sbjct:   91 RVPPHYLGHHANFSK---CERSVYIDVGAREFDSKEGMLSTFAVYPQLLGFDEFYAFEAASGFYK---LPPQPDLVRRLQ----RQGMSAARAASFARRHFFLQAFIGARSNPSTTPPTLGFSDLLKTMLGLQPADAVVVKMDVEGYEYDIVRTLLADGTHALIDEILLEVHYGHPAMMRRFNWCRMPKPGWQFWCSYSLQNATAMYRALRDAGVYAHHWP 301          
The following BLAST results are available for this feature:
BLAST of EWM22800.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103423|gb|EWM22800.1|7.861e-179100.00hypothetical protein Naga_100178g4 [Nannochloropsi... [more]
gi|553183520|ref|XP_005853913.1|3.309e-17597.06hypothetical protein NGA_0460801 [Nannochloropsis ... [more]
gi|553189189|ref|XP_005854949.1|3.805e-9754.81hypothetical protein NGA_0359401 [Nannochloropsis ... [more]
gi|585100653|gb|EWM20773.1|1.381e-9654.39Methyltransferase FkbM [Nannochloropsis gaditana][more]
gi|971519237|dbj|GAQ79019.1|2.086e-2933.77hypothetical protein KFL_000220530 [Klebsormidium ... [more]
gi|168056594|ref|XP_001780304.1|3.781e-2931.76predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|168000565|ref|XP_001752986.1|8.324e-2930.77predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|116788959|gb|ABK25064.1|5.723e-2831.88unknown [Picea sitchensis][more]
gi|148908286|gb|ABR17257.1|5.903e-2831.88unknown [Picea sitchensis][more]
gi|551557366|ref|XP_005765736.1|2.151e-2735.29hypothetical protein EMIHUDRAFT_256887 [Emiliania ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7894rna7894Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications