EWM22798.1, cds7865 (CDS) Nannochloropsis gaditana

Overview
NameEWM22798.1
Unique Namecds7865
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:24639..25289 -
Alignment locationKK037247.1:24228..24455 -

Link to JBrowse

Properties
Property NameValue
Start range24228
Start range.
Protein idEWM22798.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100178g11.3203.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:24639..25289 -
KK037247.1supercontigKK037247.1:24228..24455 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22798.1 vs. NCBI_GenBank
Match: gi|585103421|gb|EWM22798.1| (hypothetical protein Naga_100178g11, partial [Nannochloropsis gaditana])

HSP 1 Score: 580.867 bits (1496), Expect = 0.000e+0
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0 
Query:    1 MHLLRDKRRGRFSRSVVSERHAERDKKKPSTATQGKSWKGCAVSSKSKKGCFCPLASSSSTAQGPLSRRVLVPSLRPGYLITLLAVDFLLKGNLPCADAFLPRVHSQARLWARCTRSVPCLTPLQPRSPSSPGAQIAPSTDGIDPTFPAPPQVFSTPDACLSPSPVIPVRRAPVNLTTPCALTLAFPDVERRSTREGTPGYPEASKRHQVPPAHISQANFLSRCLPPTPAPTLLPSFPPSLPCFLDLHLLPPRHLGYVLKELSAPGRRRREGGGVDGKEGVLEAVCDAVAQSL 293
            MHLLRDKRRGRFSRSVVSERHAERDKKKPSTATQGKSWKGCAVSSKSKKGCFCPLASSSSTAQGPLSRRVLVPSLRPGYLITLLAVDFLLKGNLPCADAFLPRVHSQARLWARCTRSVPCLTPLQPRSPSSPGAQIAPSTDGIDPTFPAPPQVFSTPDACLSPSPVIPVRRAPVNLTTPCALTLAFPDVERRSTREGTPGYPEASKRHQVPPAHISQANFLSRCLPPTPAPTLLPSFPPSLPCFLDLHLLPPRHLGYVLKELSAPGRRRREGGGVDGKEGVLEAVCDAVAQSL
Sbjct:    1 MHLLRDKRRGRFSRSVVSERHAERDKKKPSTATQGKSWKGCAVSSKSKKGCFCPLASSSSTAQGPLSRRVLVPSLRPGYLITLLAVDFLLKGNLPCADAFLPRVHSQARLWARCTRSVPCLTPLQPRSPSSPGAQIAPSTDGIDPTFPAPPQVFSTPDACLSPSPVIPVRRAPVNLTTPCALTLAFPDVERRSTREGTPGYPEASKRHQVPPAHISQANFLSRCLPPTPAPTLLPSFPPSLPCFLDLHLLPPRHLGYVLKELSAPGRRRREGGGVDGKEGVLEAVCDAVAQSL 293
The following BLAST results are available for this feature:
BLAST of EWM22798.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103421|gb|EWM22798.1|0.000e+0100.00hypothetical protein Naga_100178g11, partial [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7887rna7887Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications