EWM22815.1, cds7857 (CDS) Nannochloropsis gaditana

Overview
NameEWM22815.1
Unique Namecds7857
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002475.1:60264..62015 -

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Properties
Property NameValue
Protein idEWM22815.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100437g2.4382.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002475.1supercontigCM002475.1:60264..62015 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22815.1 vs. NCBI_GenBank
Match: gi|585103442|gb|EWM22815.1| (hypothetical protein Naga_100437g2 [Nannochloropsis gaditana])

HSP 1 Score: 1210.28 bits (3130), Expect = 0.000e+0
Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0
Query:    1 MRWRILMKSFALECTRSKWNFNGRVGPRIGIYTDTGHGYDLPLMFLVIVCHNQLTEDRASIVYHYLLQESKMEAPLSLVHTAFALLRLSRETLLQNQPDNAQEDVKAALRSYFTKNVAHREIADISSYIDVVQKALAESGDGIMDNNEDHATVTVTTTTSANLLVDFSDSSTSATQQKSITPFCKSPPPKLKDHRDAYGVHGAGKIRSTPLHSFPTDPLATPSLLTEIFSFLGTVAPYGAEPVLNGSGHPCRMSAGPGSETTALQAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTMDAKETRTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRPFSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVWEAWSRWVLQNGTQEAVEISTSFYVSPVQKSPVSSASSTGSAEEREDGWMHFPSATGTSRQRALDQPHVIMGGDETAYANHNSFVAVQFRTLDASVPARYIKGALERSRATGG 583
            MRWRILMKSFALECTRSKWNFNGRVGPRIGIYTDTGHGYDLPLMFLVIVCHNQLTEDRASIVYHYLLQESKMEAPLSLVHTAFALLRLSRETLLQNQPDNAQEDVKAALRSYFTKNVAHREIADISSYIDVVQKALAESGDGIMDNNEDHATVTVTTTTSANLLVDFSDSSTSATQQKSITPFCKSPPPKLKDHRDAYGVHGAGKIRSTPLHSFPTDPLATPSLLTEIFSFLGTVAPYGAEPVLNGSGHPCRMSAGPGSETTALQAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTMDAKETRTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRPFSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVWEAWSRWVLQNGTQEAVEISTSFYVSPVQKSPVSSASSTGSAEEREDGWMHFPSATGTSRQRALDQPHVIMGGDETAYANHNSFVAVQFRTLDASVPARYIKGALERSRATGG
Sbjct:    1 MRWRILMKSFALECTRSKWNFNGRVGPRIGIYTDTGHGYDLPLMFLVIVCHNQLTEDRASIVYHYLLQESKMEAPLSLVHTAFALLRLSRETLLQNQPDNAQEDVKAALRSYFTKNVAHREIADISSYIDVVQKALAESGDGIMDNNEDHATVTVTTTTSANLLVDFSDSSTSATQQKSITPFCKSPPPKLKDHRDAYGVHGAGKIRSTPLHSFPTDPLATPSLLTEIFSFLGTVAPYGAEPVLNGSGHPCRMSAGPGSETTALQAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTMDAKETRTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRPFSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVWEAWSRWVLQNGTQEAVEISTSFYVSPVQKSPVSSASSTGSAEEREDGWMHFPSATGTSRQRALDQPHVIMGGDETAYANHNSFVAVQFRTLDASVPARYIKGALERSRATGG 583          
BLAST of EWM22815.1 vs. NCBI_GenBank
Match: gi|553182510|ref|XP_005853741.1| (hypothetical protein NGA_0168202 [Nannochloropsis gaditana CCMP526] >gi|422295323|gb|EKU22622.1| hypothetical protein NGA_0168202 [Nannochloropsis gaditana CCMP526] >gi|585113057|gb|EWM30397.1| hypothetical protein Naga_100026g9 [Nannochloropsis gaditana])

HSP 1 Score: 128.642 bits (322), Expect = 6.720e-28
Identity = 91/283 (32.16%), Postives = 134/283 (47.35%), Query Frame = 0
Query:  268 RVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTM----DAKETRTTKPFP-------------------------------YRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRPFSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVWEAWSRWVLQNGTQEAVEISTSFYVSPVQKSPVSSASSTGSAEER 515
            R  L  L  V R WR  A  DRFW+P+V    P L+       +E   + P P                               +R+  +++ RCL    +  G  WH  + LSF+++D QD  RLF ++GP+    +T  G+TA++LTG +R  V  PFSA SRD       +I          D+PV   +RV A D RTG  AL+++S  +TKR V+    +     +P+ +L V + WSR  + + T  A+++ T FYV+PV+  P      T SA ER
Sbjct:  258 RKQLGDLALVCRQWRDLAQADRFWKPVVLQLFPRLSPALADHDEEDGASGPDPDAAALTEAAVDGAGAGASSEPSTSPGGRAGWHRKYLIQFGRCLFDRPIRQGP-WHEGITLSFDLHDEQDGTRLFSSTGPIRFTGTTIPGITAMKLTG-RRRRVTAPFSAASRDRGLGNLSSIEELFQEGDSRDYPVSFTIRVTARDERTGKMALLFSSAKRTKRWVEPLGEDMG---VPQGTLLVNQGWSRVTIPS-TDLAMQMLTVFYVAPVEGQP-----ETISAAER 529          
BLAST of EWM22815.1 vs. NCBI_GenBank
Match: gi|585103262|gb|EWM22694.1| (hypothetical protein Naga_100340g3 [Nannochloropsis gaditana])

HSP 1 Score: 124.02 bits (310), Expect = 3.043e-26
Identity = 79/251 (31.47%), Postives = 119/251 (47.41%), Query Frame = 0
Query:  265 QAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTMDAKET----------------RTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRP-FSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVW-EAWSRWVLQNGTQEAVEISTSFYVSP 497
            Q  R  L  L  V R + A A  + +WRP+    LP L +  + +                   +   +R   L+Y  CL       GE       LSFE++D  D +R+  ASGP+ V    + G T+LR+ GT R EV  P FSA SRDP+ +RF ++  Y      P+F   L VRV  TD RTG  AL++++  K    + ++ L +W  FLP  S+  + + WS  +      E++ ++  F+V P
Sbjct:  192 QEARAVLTTLSLVNRRFHALACWEEYWRPVAEGLLPVLAVPRRHSPRRQEEEKAARGAGEGGGRRGEDFRGYLLKYGHCLLHRRAWMGEALEDGFSLSFEVWDAMDGLRMLSASGPIRVQMDQQGGFTSLRMGGTHRREVPGPAFSAASRDPLRRRFASMEDYFGRGHLPEFGAALSVRVTVTDERTGRMALLWSTR-KDAAYLTEAPLAYWEPFLPEGSISCFLDHWSPLMCPAYDGESMTVTIGFHVCP 441          
The following BLAST results are available for this feature:
BLAST of EWM22815.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585103442|gb|EWM22815.1|0.000e+0100.00hypothetical protein Naga_100437g2 [Nannochloropsi... [more]
gi|553182510|ref|XP_005853741.1|6.720e-2832.16hypothetical protein NGA_0168202 [Nannochloropsis ... [more]
gi|585103262|gb|EWM22694.1|3.043e-2631.47hypothetical protein Naga_100340g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7879rna7879Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications