EWM22815.1, cds7857 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22815.1 vs. NCBI_GenBank
Match: gi|585103442|gb|EWM22815.1| (hypothetical protein Naga_100437g2 [Nannochloropsis gaditana]) HSP 1 Score: 1210.28 bits (3130), Expect = 0.000e+0 Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0 Query: 1 MRWRILMKSFALECTRSKWNFNGRVGPRIGIYTDTGHGYDLPLMFLVIVCHNQLTEDRASIVYHYLLQESKMEAPLSLVHTAFALLRLSRETLLQNQPDNAQEDVKAALRSYFTKNVAHREIADISSYIDVVQKALAESGDGIMDNNEDHATVTVTTTTSANLLVDFSDSSTSATQQKSITPFCKSPPPKLKDHRDAYGVHGAGKIRSTPLHSFPTDPLATPSLLTEIFSFLGTVAPYGAEPVLNGSGHPCRMSAGPGSETTALQAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTMDAKETRTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRPFSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVWEAWSRWVLQNGTQEAVEISTSFYVSPVQKSPVSSASSTGSAEEREDGWMHFPSATGTSRQRALDQPHVIMGGDETAYANHNSFVAVQFRTLDASVPARYIKGALERSRATGG 583 MRWRILMKSFALECTRSKWNFNGRVGPRIGIYTDTGHGYDLPLMFLVIVCHNQLTEDRASIVYHYLLQESKMEAPLSLVHTAFALLRLSRETLLQNQPDNAQEDVKAALRSYFTKNVAHREIADISSYIDVVQKALAESGDGIMDNNEDHATVTVTTTTSANLLVDFSDSSTSATQQKSITPFCKSPPPKLKDHRDAYGVHGAGKIRSTPLHSFPTDPLATPSLLTEIFSFLGTVAPYGAEPVLNGSGHPCRMSAGPGSETTALQAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTMDAKETRTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRPFSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVWEAWSRWVLQNGTQEAVEISTSFYVSPVQKSPVSSASSTGSAEEREDGWMHFPSATGTSRQRALDQPHVIMGGDETAYANHNSFVAVQFRTLDASVPARYIKGALERSRATGG Sbjct: 1 MRWRILMKSFALECTRSKWNFNGRVGPRIGIYTDTGHGYDLPLMFLVIVCHNQLTEDRASIVYHYLLQESKMEAPLSLVHTAFALLRLSRETLLQNQPDNAQEDVKAALRSYFTKNVAHREIADISSYIDVVQKALAESGDGIMDNNEDHATVTVTTTTSANLLVDFSDSSTSATQQKSITPFCKSPPPKLKDHRDAYGVHGAGKIRSTPLHSFPTDPLATPSLLTEIFSFLGTVAPYGAEPVLNGSGHPCRMSAGPGSETTALQAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTMDAKETRTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRPFSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVWEAWSRWVLQNGTQEAVEISTSFYVSPVQKSPVSSASSTGSAEEREDGWMHFPSATGTSRQRALDQPHVIMGGDETAYANHNSFVAVQFRTLDASVPARYIKGALERSRATGG 583
BLAST of EWM22815.1 vs. NCBI_GenBank
Match: gi|553182510|ref|XP_005853741.1| (hypothetical protein NGA_0168202 [Nannochloropsis gaditana CCMP526] >gi|422295323|gb|EKU22622.1| hypothetical protein NGA_0168202 [Nannochloropsis gaditana CCMP526] >gi|585113057|gb|EWM30397.1| hypothetical protein Naga_100026g9 [Nannochloropsis gaditana]) HSP 1 Score: 128.642 bits (322), Expect = 6.720e-28 Identity = 91/283 (32.16%), Postives = 134/283 (47.35%), Query Frame = 0 Query: 268 RVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTM----DAKETRTTKPFP-------------------------------YRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRPFSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVWEAWSRWVLQNGTQEAVEISTSFYVSPVQKSPVSSASSTGSAEER 515 R L L V R WR A DRFW+P+V P L+ +E + P P +R+ +++ RCL + G WH + LSF+++D QD RLF ++GP+ +T G+TA++LTG +R V PFSA SRD +I D+PV +RV A D RTG AL+++S +TKR V+ + +P+ +L V + WSR + + T A+++ T FYV+PV+ P T SA ER Sbjct: 258 RKQLGDLALVCRQWRDLAQADRFWKPVVLQLFPRLSPALADHDEEDGASGPDPDAAALTEAAVDGAGAGASSEPSTSPGGRAGWHRKYLIQFGRCLFDRPIRQGP-WHEGITLSFDLHDEQDGTRLFSSTGPIRFTGTTIPGITAMKLTG-RRRRVTAPFSAASRDRGLGNLSSIEELFQEGDSRDYPVSFTIRVTARDERTGKMALLFSSAKRTKRWVEPLGEDMG---VPQGTLLVNQGWSRVTIPS-TDLAMQMLTVFYVAPVEGQP-----ETISAAER 529
BLAST of EWM22815.1 vs. NCBI_GenBank
Match: gi|585103262|gb|EWM22694.1| (hypothetical protein Naga_100340g3 [Nannochloropsis gaditana]) HSP 1 Score: 124.02 bits (310), Expect = 3.043e-26 Identity = 79/251 (31.47%), Postives = 119/251 (47.41%), Query Frame = 0 Query: 265 QAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTMDAKET----------------RTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRP-FSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVW-EAWSRWVLQNGTQEAVEISTSFYVSP 497 Q R L L V R + A A + +WRP+ LP L + + + + +R L+Y CL GE LSFE++D D +R+ ASGP+ V + G T+LR+ GT R EV P FSA SRDP+ +RF ++ Y P+F L VRV TD RTG AL++++ K + ++ L +W FLP S+ + + WS + E++ ++ F+V P Sbjct: 192 QEARAVLTTLSLVNRRFHALACWEEYWRPVAEGLLPVLAVPRRHSPRRQEEEKAARGAGEGGGRRGEDFRGYLLKYGHCLLHRRAWMGEALEDGFSLSFEVWDAMDGLRMLSASGPIRVQMDQQGGFTSLRMGGTHRREVPGPAFSAASRDPLRRRFASMEDYFGRGHLPEFGAALSVRVTVTDERTGRMALLWSTR-KDAAYLTEAPLAYWEPFLPEGSISCFLDHWSPLMCPAYDGESMTVTIGFHVCP 441 The following BLAST results are available for this feature:
BLAST of EWM22815.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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