EWM22839.1, cds7835 (CDS) Nannochloropsis gaditana

Overview
NameEWM22839.1
Unique Namecds7835
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:136891..137015 +
Alignment locationCM002474.1:137070..137322 +
Alignment locationCM002474.1:137373..137432 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22839.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100295g5.2581.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:136891..137015 +
CM002474.1supercontigCM002474.1:137070..137322 +
CM002474.1supercontigCM002474.1:137373..137432 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22839.1 vs. NCBI_GenBank
Match: gi|585103477|gb|EWM22839.1| (hypothetical protein Naga_100295g5 [Nannochloropsis gaditana])

HSP 1 Score: 298.901 bits (764), Expect = 1.006e-102
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 
Query:    1 MTPRKMRGSPSMTELTIQCNIYPWILQHNWFEFKLTDCIILLTTPMDATNEILRCVPNPVKENVYPSSQENTLMNDGRSSSAPSLVDVAVRLPPAFTFVPNASTGGAPASGARVVRSATWQGGAPADIVIGVKTIRRRTRRSAAV 145
            MTPRKMRGSPSMTELTIQCNIYPWILQHNWFEFKLTDCIILLTTPMDATNEILRCVPNPVKENVYPSSQENTLMNDGRSSSAPSLVDVAVRLPPAFTFVPNASTGGAPASGARVVRSATWQGGAPADIVIGVKTIRRRTRRSAAV
Sbjct:    1 MTPRKMRGSPSMTELTIQCNIYPWILQHNWFEFKLTDCIILLTTPMDATNEILRCVPNPVKENVYPSSQENTLMNDGRSSSAPSLVDVAVRLPPAFTFVPNASTGGAPASGARVVRSATWQGGAPADIVIGVKTIRRRTRRSAAV 145
The following BLAST results are available for this feature:
BLAST of EWM22839.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103477|gb|EWM22839.1|1.006e-102100.00hypothetical protein Naga_100295g5 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7857rna7857Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications