EWM22846.1, cds7827 (CDS) Nannochloropsis gaditana

Overview
NameEWM22846.1
Unique Namecds7827
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:124242..124430 -
Alignment locationCM002474.1:123947..124163 -
Alignment locationCM002474.1:123788..123876 -

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Properties
Property NameValue
Protein idEWM22846.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100293g5.8352.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:124242..124430 -
CM002474.1supercontigCM002474.1:123947..124163 -
CM002474.1supercontigCM002474.1:123788..123876 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22846.1 vs. NCBI_GenBank
Match: gi|585103485|gb|EWM22846.1| (hypothetical protein Naga_100293g5 [Nannochloropsis gaditana])

HSP 1 Score: 338.576 bits (867), Expect = 7.818e-118
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 
Query:    1 MASPFSSTGGKLGLASKVQTQGSCHDAENSDGCCLAGVDDRLEALAHSVSQDVIPGLERELNKVRGWLAMLDARQPVGCISARANPSGLSKTQSLSERSGESEAVPISQSELNLKVHHKLETLNTAVRVFKVRNPNGTGYQLQGADEDDNLLTCDMQREIWIIA 164
            MASPFSSTGGKLGLASKVQTQGSCHDAENSDGCCLAGVDDRLEALAHSVSQDVIPGLERELNKVRGWLAMLDARQPVGCISARANPSGLSKTQSLSERSGESEAVPISQSELNLKVHHKLETLNTAVRVFKVRNPNGTGYQLQGADEDDNLLTCDMQREIWIIA
Sbjct:    1 MASPFSSTGGKLGLASKVQTQGSCHDAENSDGCCLAGVDDRLEALAHSVSQDVIPGLERELNKVRGWLAMLDARQPVGCISARANPSGLSKTQSLSERSGESEAVPISQSELNLKVHHKLETLNTAVRVFKVRNPNGTGYQLQGADEDDNLLTCDMQREIWIIA 164
[Close]
BLAST of EWM22846.1 vs. NCBI_GenBank
Match: gi|553186712|ref|XP_005854474.1| (hypothetical protein NGA_0103002, partial [Nannochloropsis gaditana CCMP526] >gi|422294582|gb|EKU21882.1| hypothetical protein NGA_0103002, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 267.7 bits (683), Expect = 3.542e-90
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0 
Query:    1 MASPFSSTGGKLGLASKVQTQGSCHDAENSDGCCLAGVDDRLEALAHSVSQDVIPGLERELNKVRGWLAMLDARQPVGCISARANPSGLSKTQSLSERSGESEAVPISQSELNLKVHHKLETLNTAVRVFKV 132
            MASPFSSTGGKLGLASKVQTQGSCHDAENSDGCCLAGVDDRLEALAHSVSQDVIPGLERELNKVRGWLAMLDARQPVGCISARANPSGLSKTQSLSERSGESEAVPISQSELNLKVHHKLETLNTAVRVFK 
Sbjct:    1 MASPFSSTGGKLGLASKVQTQGSCHDAENSDGCCLAGVDDRLEALAHSVSQDVIPGLERELNKVRGWLAMLDARQPVGCISARANPSGLSKTQSLSERSGESEAVPISQSELNLKVHHKLETLNTAVRVFKT 132
The following BLAST results are available for this feature:
BLAST of EWM22846.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103485|gb|EWM22846.1|7.818e-118100.00hypothetical protein Naga_100293g5 [Nannochloropsi... [more]
gi|553186712|ref|XP_005854474.1|3.542e-9099.24hypothetical protein NGA_0103002, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7849rna7849Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications