EWM22860.1, cds7814 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22860.1 vs. NCBI_GenBank
Match: gi|585103505|gb|EWM22860.1| (hypothetical protein Naga_100988g2 [Nannochloropsis gaditana]) HSP 1 Score: 1033.86 bits (2672), Expect = 0.000e+0 Identity = 512/512 (100.00%), Postives = 512/512 (100.00%), Query Frame = 0
Query: 1 MVADPPAAPPPAPPSALPAHGAQKDEPRPPSKRRNASEPKQRPPPPTSLPNNVIATLSSSLSSQQLTGGSLGSSGAGSGNTVRPAAFIRQGQGHHPHLNPSHVPTPISQSLRTHDATTPYTSTIHPRPPPPPSVPSSYNTAPGPSTQFRFYLPPSDEPGIGDPTGCVSLSSHRPSARVAGQRNAPMAVFADTKSPKRAAKGKRPRSGAGQQDAGTYLPQPPSSDIQRGSMAGYRGGHPLRERNEALAVLPVQPSTVNTSIYPLRGFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGIDAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQALMSTQSDTACLPLFLRLARDTTACLMVFRGNDHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLDPVDVEALLAGSADLVLDKFNQGRSSFDRIVGVTTRDGRKGRAMATLGWHSSEDVVQTLILRLIPLGFHDLPGSRRRWRT 512
MVADPPAAPPPAPPSALPAHGAQKDEPRPPSKRRNASEPKQRPPPPTSLPNNVIATLSSSLSSQQLTGGSLGSSGAGSGNTVRPAAFIRQGQGHHPHLNPSHVPTPISQSLRTHDATTPYTSTIHPRPPPPPSVPSSYNTAPGPSTQFRFYLPPSDEPGIGDPTGCVSLSSHRPSARVAGQRNAPMAVFADTKSPKRAAKGKRPRSGAGQQDAGTYLPQPPSSDIQRGSMAGYRGGHPLRERNEALAVLPVQPSTVNTSIYPLRGFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGIDAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQALMSTQSDTACLPLFLRLARDTTACLMVFRGNDHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLDPVDVEALLAGSADLVLDKFNQGRSSFDRIVGVTTRDGRKGRAMATLGWHSSEDVVQTLILRLIPLGFHDLPGSRRRWRT
Sbjct: 1 MVADPPAAPPPAPPSALPAHGAQKDEPRPPSKRRNASEPKQRPPPPTSLPNNVIATLSSSLSSQQLTGGSLGSSGAGSGNTVRPAAFIRQGQGHHPHLNPSHVPTPISQSLRTHDATTPYTSTIHPRPPPPPSVPSSYNTAPGPSTQFRFYLPPSDEPGIGDPTGCVSLSSHRPSARVAGQRNAPMAVFADTKSPKRAAKGKRPRSGAGQQDAGTYLPQPPSSDIQRGSMAGYRGGHPLRERNEALAVLPVQPSTVNTSIYPLRGFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGIDAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQALMSTQSDTACLPLFLRLARDTTACLMVFRGNDHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLDPVDVEALLAGSADLVLDKFNQGRSSFDRIVGVTTRDGRKGRAMATLGWHSSEDVVQTLILRLIPLGFHDLPGSRRRWRT 512
BLAST of EWM22860.1 vs. NCBI_GenBank
Match: gi|553178413|ref|XP_005852550.1| (hypothetical protein NGA_0687300 [Nannochloropsis gaditana CCMP526] >gi|422295983|gb|EKU23282.1| hypothetical protein NGA_0687300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 989.564 bits (2557), Expect = 0.000e+0 Identity = 498/534 (93.26%), Postives = 505/534 (94.57%), Query Frame = 0
Query: 1 MVADPPAAPPPAPPSALPAHGAQKDEPRPPSKRRNASEPKQRPPPPTSLPNNVIATLSSSLSSQQLTGGSLGSSGAGSGNTVRPAAFIRQGQGHHPHLNPSHVPTPISQSLRTHDATTPYTSTIHPRPPPPPSVPSSYNTAPGPSTQFRFYLPPSDEPGIGDPTGCVSLSSHRPSARVAGQRNAPMAVFADTKSPKRAAKGKRPRSGAGQQDAGTYLPQPPSSDIQRGSMAGYRGGHPLRERNEALAVLPVQPSTVNTSIYPLR----------------------GFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGIDAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQALMSTQSDTACLPLFLRLARDTTACLMVFRGNDHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLDPVDVEALLAGSADLVLDKFNQGRSSFDRIVGVTTRDGRKGRAMATLGWHSSEDVVQTLILRLIPLGFHDLP-GSRRRWR 511
MVA+PP+APPPAPPSALPAHGAQKDEPRPPSKRRNASEPK+RPPPPTSLPNNVIATLSSSLSSQQL+GGSLGSSGAGSGNTVRPAAFIRQGQGHHPHLNPSHVPTPISQSLRTHDATTP+TSTIHPRPPPPPSVPSSYNTAPGPSTQFRFYLPPSDEPGIGDPTGCVSLSSHRPSARVAGQRNAPMAVFADTKSPKRAAKG+RPRSGAGQQDAGTYLPQPPSSDIQRGSMAGYRGGHPLRERNEALAVLPVQPSTVNTSIYPLR GFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGIDAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQALMSTQSDTACLPLFLRLARDTTACLMVFRGNDHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLDPVDVEALLAGSADLVLDKFNQGRSS DRIVGVTTRDGR GRAMATLGWHSSEDVVQTLILRLIPLGFHD+P G R R
Sbjct: 1 MVAEPPSAPPPAPPSALPAHGAQKDEPRPPSKRRNASEPKRRPPPPTSLPNNVIATLSSSLSSQQLSGGSLGSSGAGSGNTVRPAAFIRQGQGHHPHLNPSHVPTPISQSLRTHDATTPHTSTIHPRPPPPPSVPSSYNTAPGPSTQFRFYLPPSDEPGIGDPTGCVSLSSHRPSARVAGQRNAPMAVFADTKSPKRAAKGRRPRSGAGQQDAGTYLPQPPSSDIQRGSMAGYRGGHPLRERNEALAVLPVQPSTVNTSIYPLRGSPISATDPFPPPSLISPLTPPGFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGIDAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQALMSTQSDTACLPLFLRLARDTTACLMVFRGNDHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLDPVDVEALLAGSADLVLDKFNQGRSSIDRIVGVTTRDGRWGRAMATLGWHSSEDVVQTLILRLIPLGFHDVPVGVREEGR 534
BLAST of EWM22860.1 vs. NCBI_GenBank
Match: gi|585109633|gb|EWM27402.1| (hypothetical protein Naga_100212g6 [Nannochloropsis gaditana]) HSP 1 Score: 77.7962 bits (190), Expect = 1.339e-11 Identity = 79/273 (28.94%), Postives = 113/273 (41.39%), Query Frame = 0
Query: 249 LPVQPSTVNTSIYPLRGFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGI-DAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQAL-MSTQSDTACLPLFLRLARDTTACLMVFRGN-DHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLD-PVDVEALLAGSADLVLDKFNQGRSSFDRIVGVTTRDGRKG-------RAMATLGWHSSE-DVVQTLILRLIPLGFHDLPGSRRR 509
LP+ ST + ++ G + RL A+ D +K + A + S G+ D G+ L +L + P + +P + V GPP A S D + L +LA D AC +V N + V CN RMS LF+S+EE+ GL QT A +FW FL P E + A SA +V S D I+ + KG + +AT+G + LILRL+P G DL RR+
Sbjct: 289 LPLLDSTSASILHARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQ--AFAPKRRKAKSGGVGE---------------RGPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHT---PSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQ 541
BLAST of EWM22860.1 vs. NCBI_GenBank
Match: gi|553186625|ref|XP_005854455.1| (hypothetical protein NGA_0244301 [Nannochloropsis gaditana CCMP526] >gi|553187875|ref|XP_005854696.1| hypothetical protein NGA_0244302 [Nannochloropsis gaditana CCMP526] >gi|422294361|gb|EKU21661.1| hypothetical protein NGA_0244302 [Nannochloropsis gaditana CCMP526] >gi|422294601|gb|EKU21901.1| hypothetical protein NGA_0244301 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 77.411 bits (189), Expect = 1.940e-11 Identity = 79/273 (28.94%), Postives = 113/273 (41.39%), Query Frame = 0
Query: 249 LPVQPSTVNTSIYPLRGFCDGMLRLRAENRFDLKKAIDFSARVEVLSYPYGI-DAAYGINQALRSILVSNPDMSSLSPSLVSSIKASVTAASSSSLLSAVHVRVPHGPPTAQAL-MSTQSDTACLPLFLRLARDTTACLMVFRGN-DHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLD-PVDVEALLAGSADLVLDKFNQGRSSFDRIVGVTTRDGRKG-------RAMATLGWHSSE-DVVQTLILRLIPLGFHDLPGSRRR 509
LP+ ST + ++ G + RL A+ D +K + A + S G+ D G+ L +L + P + +P + V GPP A S D + L +LA D AC +V N + V CN RMS LF+S+EE+ GL QT A +FW FL P E + A SA +V S D I+ + KG + +AT+G + LILRL+P G DL RR+
Sbjct: 289 LPLLDSTSASILHARNGVSGAIARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLLDTQPQ--AFAPKRRKAKSGGVGE---------------RGPPAGGAQGNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHT---PSLDVILECCVQRAVKGSERPAPTKCLATVGMIINRLREGNVLILRLLPCGRSDLKSRRRQ 541
BLAST of EWM22860.1 vs. NCBI_GenBank
Match: gi|585100580|gb|EWM20727.1| (hypothetical protein Naga_102498g1 [Nannochloropsis gaditana]) HSP 1 Score: 62.3882 bits (150), Expect = 5.193e-8 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 0
Query: 376 RLARDTTACLMVFRGN-DHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLDPVDVEALLAGSADLVLDKFNQG-RSSFDRIVGV 465
RL +D TAC +V RG H V CN RM++LF+ EI+GL+ QTG AFW F V E+LL+ A LV G ++ D ++ V
Sbjct: 30 RLTKDETACYLVSRGGFGHHHVVECNQRMATLFLPNPEIQGLVHQTGLGSSAFWGRF---VCNESLLSLYAALVTLMLGYGSKTQIDVVLKV 118 The following BLAST results are available for this feature:
BLAST of EWM22860.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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