EWM22867.1, cds7810 (CDS) Nannochloropsis gaditana

Overview
NameEWM22867.1
Unique Namecds7810
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:71616..72881 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22867.1
Productintraflagellar transport particle protein ift140
Orig transcript idgnl|cribi|Naga_100341g5.8453.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:71616..72881 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Homology
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|585103514|gb|EWM22867.1| (intraflagellar transport particle protein ift140 [Nannochloropsis gaditana])

HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0
Query:    1 MPSFAGLSYENFSLHAKSCLKAFHFQLFSQDWHAAHQSLRIIFPQRQPDSKAGKKCQNEEPNDHNQQLRKEGNCKQQLLCIWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES 421
            MPSFAGLSYENFSLHAKSCLKAFHFQLFSQDWHAAHQSLRIIFPQRQPDSKAGKKCQNEEPNDHNQQLRKEGNCKQQLLCIWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES
Sbjct:    1 MPSFAGLSYENFSLHAKSCLKAFHFQLFSQDWHAAHQSLRIIFPQRQPDSKAGKKCQNEEPNDHNQQLRKEGNCKQQLLCIWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES 421          
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|553189723|ref|XP_005855058.1| (intraflagellar transport 140-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294003|gb|EKU21303.1| intraflagellar transport 140-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 505.753 bits (1301), Expect = 3.206e-178
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0
Query:  172 QAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES 421
            QAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAG LHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES
Sbjct:    1 QAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGGLHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES 250          
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|159475992|ref|XP_001696098.1| (intraflagellar transport particle protein IFT140 [Chlamydomonas reinhardtii] >gi|158275269|gb|EDP01047.1| intraflagellar transport particle protein IFT140 [Chlamydomonas reinhardtii])

HSP 1 Score: 231.876 bits (590), Expect = 1.458e-63
Identity = 135/341 (39.59%), Postives = 198/341 (58.06%), Query Frame = 0
Query:   81 IWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES 421
            +W NMAH+ +RN+R++VAEHCLS M H RG  A+REA               S    D  +  VA+ LG++++A  LYI  +R+DLLN++Y+A G+W+KAL+VAEK+DR+HL++TH+ Y + +ER  + + A  HYE AG    EVPRML +A K  +L+ Y+          ++ D++ L  WWG+Y ES  +   A + YRKA D +++VR+ C  +D  AAE                   + +N A   AAS+HLAR YE A   +  A+ +Y  A  + H +RLAK HELD+D+M  AL+S  A +M D+A Y     Q E+A  L  K  K+ ++
Sbjct:  723 VWENMAHMCIRNKRLDVAEHCLSNMEHARGARALREA--------------KSIEEADARVATVAVHLGMIEDAKKLYIACERYDLLNQLYRACGQWDKALEVAEKNDRIHLKSTHYAYGQFMERQGDMEGARKHYEAAGCGLVEVPRMLFEAEKFTELQNYI----------QANDSRELILWWGKYLESLGEYAKALDCYRKAGDSLSMVRIHCFQRDWKAAE------------------DEVTNSA-DNAASFHLARQYE-ASGRIPEAIRYYTLAKRYSHGVRLAKTHELDSDLMNLALKSTPA-VMIDTADYLFAKGQHEKAATLYMKGGKLSKA 1018          
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|51101256|gb|AAT95430.1| (intraflagellar transport particle protein 140 [Chlamydomonas reinhardtii])

HSP 1 Score: 231.876 bits (590), Expect = 1.529e-63
Identity = 135/341 (39.59%), Postives = 198/341 (58.06%), Query Frame = 0
Query:   81 IWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES 421
            +W NMAH+ +RN+R++VAEHCLS M H RG  A+REA               S    D  +  VA+ LG++++A  LYI  +R+DLLN++Y+A G+W+KAL+VAEK+DR+HL++TH+ Y + +ER  + + A  HYE AG    EVPRML +A K  +L+ Y+          ++ D++ L  WWG+Y ES  +   A + YRKA D +++VR+ C  +D  AAE                   + +N A   AAS+HLAR YE A   +  A+ +Y  A  + H +RLAK HELD+D+M  AL+S  A +M D+A Y     Q E+A  L  K  K+ ++
Sbjct:  723 VWENMAHMCIRNKRLDVAEHCLSNMEHARGARALREA--------------KSIEEADARVATVAVHLGMIEDAKKLYIACERYDLLNQLYRACGQWDKALEVAEKNDRIHLKSTHYAYGQFMERQGDMEGARKHYEAAGCGLVEVPRMLFEAEKFTELQNYI----------QANDSRELILWWGKYLESLGEYAKALDCYRKAGDSLSMVRIHCFQRDWKAAE------------------DEVTNSA-DNAASFHLARQYE-ASGRIPEAIRYYTLAKRYSHGVRLAKTHELDSDLMNLALKSTPA-VMIDTADYLFAKGQHEKAATLYMKGGKLSKA 1018          
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|1004142875|gb|KXZ50860.1| (hypothetical protein GPECTOR_14g111 [Gonium pectorale])

HSP 1 Score: 229.18 bits (583), Expect = 1.155e-62
Identity = 133/341 (39.00%), Postives = 198/341 (58.06%), Query Frame = 0
Query:   81 IWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES 421
            +W NMAH+ +RN+R++VAEHCLS M H RG  A+REA               +    D  +  VA+ LG++++A  LYI  +R+DLLN++Y+A G+WEKAL++AEK DR+HL++TH+ YA+ LER  +   A  HYE +G    EVPRML +A K  DL+ ++          ++ D++ L  WWGRY ES  +   A + YRKA D +++VR+ C  ++  AAE                   + +N   +A A +HLAR YE A   +  A+ +Y +A  + H +RLAK HELD+D+M  AL+S  A +M D+A Y  +  Q E+A  L  K  K+ ++
Sbjct:  726 VWENMAHMCIRNKRLDVAEHCLSNMEHARGARALREA--------------KAIEEADARVATVAVHLGMIEDAKKLYIACERYDLLNQLYRACGQWEKALEIAEKHDRIHLKSTHYVYAQYLERSGDLAGAQKHYEASGCSLVEVPRMLFEAEKFNDLQAFI----------QANDSRELILWWGRYLESLGEYGKALDCYRKAGDSLSMVRIHCFQKEWKAAE------------------EEVANSGDQAGA-FHLARQYEAA-GRIPEAVRYYTQAKRYSHGVRLAKVHELDSDLMNLALKSTPA-VMIDTADYLFQKGQHEKAATLYMKGGKLSKA 1021          
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|669141536|ref|XP_008606330.1| (hypothetical protein SDRG_02514 [Saprolegnia diclina VS20] >gi|530741614|gb|EQC39856.1| hypothetical protein SDRG_02514 [Saprolegnia diclina VS20])

HSP 1 Score: 224.557 bits (571), Expect = 5.368e-61
Identity = 134/339 (39.53%), Postives = 187/339 (55.16%), Query Frame = 0
Query:   77 QLLCIWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKA 415
            Q   +W NMAH+ ++ +R++VA+ CL +MGH     A   A    +  P+ P         ++P+ MVAIQLGLL +AA LY  + RFDLLN++YQAAG W KA++VA K DR+HL++THF YA+ LE       A+ H+E AG  A+++PRML   GK+E L+ Y S+           D   L  WW +Y ES  +  AA   YR+A D ++LVR+ C  +D  AA                    Q   +    AA+YHLAR +E A  DV  A+  YA +G + H IRL++ H LD D+MQYAL S    +++  AQYF    + E+A  L  K 
Sbjct:  756 QNTSVWENMAHMCVKTKRLDVAQVCLGHMGH-----ARGAAAVDAAARPTAP--------VEVPIAMVAIQLGLLDDAARLYKESNRFDLLNKLYQAAGFWSKAIEVATKRDRIHLKSTHFAYAKHLEDEGNLKDAMRHFELAGTAAKDIPRMLFGLGKLEMLDTYASKT----------DDPALLLWWAQYQESNHEFDAAAVCYRRAKDYLSLVRVLCFKKDFDAA-------------------GQVVANTNNRAAAYHLARQFE-AHDDVGKAIQFYALSGSYGHAIRLSREHNLDGDLMQYALLSKPGPMLE-CAQYFEAKGEHEKAVALYHKG 1050          
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|299115750|emb|CBN74315.1| (Intraflagellar transport protein 140 puative [Ectocarpus siliculosus])

HSP 1 Score: 223.787 bits (569), Expect = 8.933e-61
Identity = 134/344 (38.95%), Postives = 196/344 (56.98%), Query Frame = 0
Query:   81 IWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQA---SNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKARKMRES 421
            +W NMAH+ ++ RR++VAE CL  MGH RG  AVR A   P                ++ +  VA QLGLL +A  LY    R+DLLN +YQA+G WE+AL+VAE +D ++L TTH  YA+ LE++ +   AI HYE AG    EVPRML++ G++EDLE+Y+++          G+   L +WW +Y ES+ + + A++ Y +A D ++LVRLAC    V                   +  RQA    N +  A A+YHLARH E A+     A++ YAR+  F H IRLAK H +D+++M +AL+S +  LM   A Y     + E+A +L  KA ++ ++
Sbjct:  939 VWENMAHMCVKTRRLDVAELCLGNMGHARGAAAVRLAKMEPE--------------PEVAVAQVATQLGLLDDAVRLYRECGRYDLLNGLYQASGLWERALEVAEANDGINLSTTHQLYAQHLEKVGDTAGAIQHYELAGTHCVEVPRMLYERGRVEDLEEYITQ----------GNNVQLLKWWSQYLESRGEFEKARKTYTRAQDYLSLVRLACQGGQV-----------------ERVRHRQAIGIVNESGSAPAAYHLARHLE-AVGRTAEAVSFYARSNRFNHAIRLAKDHGMDSELMGFALKS-RPSLMVSVADYLQDKGELEKAVQLYQKAGEVTKA 1239          
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|1173936389|gb|OQR87348.1| (Intraflagellar Transport protein [Achlya hypogyna])

HSP 1 Score: 223.787 bits (569), Expect = 9.493e-61
Identity = 135/335 (40.30%), Postives = 193/335 (57.61%), Query Frame = 0
Query:   77 QLLCIWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQEL 411
            Q   +W NMAH+ ++ +R++VA+ CL +MGH R   A  +A +SP +            + ++P+ MVAIQLGL  EAA LY  A RFDLLN++YQAAG W KA++VA K DR+HL++THF YA+ LE      +A+ H+E AG  A+++PRML   GK+E L+ Y S+           D   L  WW +Y ES  +  AA   YR+A D+++LVR+ C  +D  AA  ++                  +N   +AAA YHLAR +E A  +V  A+  YA +G + H IRL++ H LD D+MQYAL S    +++  AQYF    + E+A  L
Sbjct:  748 QNTSVWENMAHMCIKTKRLDVAQVCLGHMGHAR-GAAAVDAAASPGV------------AVEVPIAMVAIQLGLRDEAARLYKEAGRFDLLNKLYQAAGFWAKAIEVAAKRDRIHLKSTHFAYAKHLEEEGNLKEAMRHFELAGTAAKDIPRMLFSLGKLEMLDSYASKT----------DDPALLLWWAQYQESNHEFDAAAVCYRRAKDILSLVRVLCFKKDFDAAAQVI------------------ANTGNRAAA-YHLARQFE-AHDEVGRAIQFYATSGSYGHAIRLSREHNLDGDLMQYALLSKPGPMLE-CAQYFEAKREFEKAVAL 1038          
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|1173961124|gb|OQS07185.1| (Intraflagellar Transport Protein [Thraustotheca clavata])

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-60
Identity = 132/335 (39.40%), Postives = 191/335 (57.01%), Query Frame = 0
Query:   81 IWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKA 415
            +W NMAH+ ++ +R++VA+ CL  MGH RG  AV  A S+            +  + ++P+ MVAIQLGLL +AA LY  + RFDLLN++YQAAG W KA++VA K DR+HL++THF YA+ LE      +A+ H+E AG  A+++PRML   GK+E L+ Y S+           D   +  WW +Y ES ++  +A   YR+A D ++LVR+ C  +D  AA                    Q   ++   AA+YHLAR +E A  +V  A+  YA +G + H IRL++ H LD D+MQYAL S    +++  AQYF    + E+A  L  K 
Sbjct:  763 VWENMAHMCVKTKRLDVAQVCLGNMGHARGAAAVDAAASN----------ERNKTTVEVPIAMVAIQLGLLDDAARLYKESGRFDLLNKLYQAAGYWGKAIEVASKRDRIHLKSTHFAYAKHLEEEGNLKEAMRHFELAGTAAKDIPRMLFGLGKLEMLDSYASKT----------DDPQVLLWWAQYQESNQEFDSAAVCYRRAKDFLSLVRVLCFKKDFDAAA-------------------QVVANSNNRAAAYHLARQFE-AHDEVGRAIQFYATSGSYSHAIRLSREHNLDGDLMQYALLSKPGPMLE-CAQYFEAKREYEKAVALYHKG 1056          
BLAST of EWM22867.1 vs. NCBI_GenBank
Match: gi|813194355|ref|XP_012208438.1| (hypothetical protein SPRG_14091 [Saprolegnia parasitica CBS 223.65] >gi|641526500|gb|KDO20860.1| hypothetical protein SPRG_14091 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 221.476 bits (563), Expect = 4.837e-60
Identity = 135/335 (40.30%), Postives = 189/335 (56.42%), Query Frame = 0
Query:   81 IWRNMAHLSLRNRRVEVAEHCLSYMGHIRGVHAVREAVSSPSLYPSLPSLTSSTCSTDIPLGMVAIQLGLLQEAAALYIRAKRFDLLNRMYQAAGKWEKALQVAEKDDRLHLRTTHFQYARRLERMSEWDKAIFHYEKAGAQAREVPRMLHKAGKIEDLEKYLSRQKSTVADRESGDAKMLWRWWGRYCESKRDVKAAKEAYRKAADLVALVRLACVAQDVGAAEALLDDKDAGALHQGEISWRQASNHAMKAAASYHLARHYEGALYDVLPALTHYARAGCFKHCIRLAKAHELDNDVMQYALQSGQADLMQDSAQYFLKLDQSERAQELIGKA 415
            +W NMAH+ ++ +R++VA+ CL +MGH     A   A    +  P  P         ++P+ MVAIQLGLL +AA LY  + RFDLLN++YQAAG W KA++VA K DR+HL++THF YA+ LE       A+ H+E AG  A+++PRML   GK+E L+ Y S+           D   L  WW +Y ES  +  AA   YR+A D ++LVR+ C  +D  AA              G+I     +N   +AAA YHLAR +E A  +V  A+  YA +G + H IRL++ H LD D+MQYAL S    +++  AQYF    + E+A  L  K 
Sbjct:  759 VWENMAHMCVKTKRLDVAQVCLGHMGH-----ARGAAAVDAAARPMAP--------VEVPIAMVAIQLGLLDDAARLYKESNRFDLLNKLYQAAGFWSKAIEVANKRDRIHLKSTHFAYAKHLEDEGNLKDAMRHFELAGTAAKDIPRMLFGLGKLEMLDTYASKT----------DDPALLLWWAQYQESNHEFDAAAVCYRRAKDYLSLVRVLCFKKDFDAA--------------GQI----VANTNNRAAA-YHLARQFE-AHDEVGKAIQFYALSGSYGHAIRLSREHNLDGDLMQYALLSKPGPMLE-CAQYFEAKGEHEKAVALYHKG 1049          
The following BLAST results are available for this feature:
BLAST of EWM22867.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103514|gb|EWM22867.1|0.000e+0100.00intraflagellar transport particle protein ift140 [... [more]
gi|553189723|ref|XP_005855058.1|3.206e-17899.60intraflagellar transport 140-like protein, partial... [more]
gi|159475992|ref|XP_001696098.1|1.458e-6339.59intraflagellar transport particle protein IFT140 [... [more]
gi|51101256|gb|AAT95430.1|1.529e-6339.59intraflagellar transport particle protein 140 [Chl... [more]
gi|1004142875|gb|KXZ50860.1|1.155e-6239.00hypothetical protein GPECTOR_14g111 [Gonium pector... [more]
gi|669141536|ref|XP_008606330.1|5.368e-6139.53hypothetical protein SDRG_02514 [Saprolegnia dicli... [more]
gi|299115750|emb|CBN74315.1|8.933e-6138.95Intraflagellar transport protein 140 puative [Ecto... [more]
gi|1173936389|gb|OQR87348.1|9.493e-6140.30Intraflagellar Transport protein [Achlya hypogyna][more]
gi|1173961124|gb|OQS07185.1|2.526e-6039.40Intraflagellar Transport Protein [Thraustotheca cl... [more]
gi|813194355|ref|XP_012208438.1|4.837e-6040.30hypothetical protein SPRG_14091 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7831rna7831Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications