EWM22870.1, cds7803 (CDS) Nannochloropsis gaditana

Overview
NameEWM22870.1
Unique Namecds7803
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:55609..55896 +
Alignment locationCM002474.1:56163..56227 +
Alignment locationCM002474.1:56283..56292 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22870.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100931g1.4616.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:55609..55896 +
CM002474.1supercontigCM002474.1:56163..56227 +
CM002474.1supercontigCM002474.1:56283..56292 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22870.1 vs. NCBI_GenBank
Match: gi|585103521|gb|EWM22870.1| (hypothetical protein Naga_100931g1 [Nannochloropsis gaditana])

HSP 1 Score: 246.899 bits (629), Expect = 6.549e-83
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 
Query:    1 MAEIGAATARGAEGPNAPRHGGPQIDWQGLIQQVLKTMTMVWVMNSVMRQFTGPPSPPSSPSAVDVTGAGDARSGTNEILPWRGPLRMMWPEGTPMFLRVYLTEHRDFDRRRDHPKFLKR 120
            MAEIGAATARGAEGPNAPRHGGPQIDWQGLIQQVLKTMTMVWVMNSVMRQFTGPPSPPSSPSAVDVTGAGDARSGTNEILPWRGPLRMMWPEGTPMFLRVYLTEHRDFDRRRDHPKFLKR
Sbjct:    1 MAEIGAATARGAEGPNAPRHGGPQIDWQGLIQQVLKTMTMVWVMNSVMRQFTGPPSPPSSPSAVDVTGAGDARSGTNEILPWRGPLRMMWPEGTPMFLRVYLTEHRDFDRRRDHPKFLKR 120
The following BLAST results are available for this feature:
BLAST of EWM22870.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103521|gb|EWM22870.1|6.549e-83100.00hypothetical protein Naga_100931g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7824rna7824Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications