EWM22875.1, cds7798 (CDS) Nannochloropsis gaditana

Overview
NameEWM22875.1
Unique Namecds7798
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:47370..47753 +

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Properties
Property NameValue
Start range47370
Start range.
Protein idEWM22875.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_103517g1.9486.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:47370..47753 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22875.1 vs. NCBI_GenBank
Match: gi|585103530|gb|EWM22875.1| (hypothetical protein Naga_103517g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 230.72 bits (587), Expect = 2.545e-76
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 
Query:    1 PSLPPSLPPPLPPSSTGPCGQSLEIRASPGIGLDREEHQASHMRLLPYGTLPSSPSSPFSPEAPLTAVSAMPLPPPSLLLLAMKPRRRHSPSCLVRQLGPLLPVVLLPPLSLHRCLPLRSSTVLQGT 127
            PSLPPSLPPPLPPSSTGPCGQSLEIRASPGIGLDREEHQASHMRLLPYGTLPSSPSSPFSPEAPLTAVSAMPLPPPSLLLLAMKPRRRHSPSCLVRQLGPLLPVVLLPPLSLHRCLPLRSSTVLQGT
Sbjct:    1 PSLPPSLPPPLPPSSTGPCGQSLEIRASPGIGLDREEHQASHMRLLPYGTLPSSPSSPFSPEAPLTAVSAMPLPPPSLLLLAMKPRRRHSPSCLVRQLGPLLPVVLLPPLSLHRCLPLRSSTVLQGT 127
The following BLAST results are available for this feature:
BLAST of EWM22875.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103530|gb|EWM22875.1|2.545e-76100.00hypothetical protein Naga_103517g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7819rna7819Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications