EWM22879.1, cds7796 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|553187690|ref|XP_005854660.1| (ubiquitin thioesterase otub1 [Nannochloropsis gaditana CCMP526] >gi|422294405|gb|EKU21705.1| ubiquitin thioesterase otub1 [Nannochloropsis gaditana CCMP526] >gi|585103534|gb|EWM22878.1| ubiquitin thioesterase otub1 [Nannochloropsis gaditana] >gi|585103535|gb|EWM22879.1| ubiquitin thioesterase otub1 [Nannochloropsis gaditana]) HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
Query: 1 MQQREEASSLPRAEDVHENGLSQSQAAGHNHQVEEDRDLLTIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVPVTLLYRPGHYDLLVK 316
MQQREEASSLPRAEDVHENGLSQSQAAGHNHQVEEDRDLLTIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVPVTLLYRPGHYDLLVK
Sbjct: 1 MQQREEASSLPRAEDVHENGLSQSQAAGHNHQVEEDRDLLTIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVPVTLLYRPGHYDLLVK 316
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|299473701|emb|CBN78094.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 246.128 bits (627), Expect = 7.304e-77 Identity = 134/274 (48.91%), Postives = 171/274 (62.41%), Query Frame = 0
Query: 41 TIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVPVTLLYRPGHYDLL 314
T+ QQ I++ I A+QP VG E LL Y+ NP+ GF +GV+DL +RY+ +RR+R DGNCFYR+FLF YL L++ GI+ K E R Q V DSKA L+ +GYEEVA+D FW+ F++EL+ALP+ + LE F E G Y+VWYCR+LTSG+LK + + + FL+ + DM DFC REVEP GKECEQ+QIM L L V+IEYLDG+ GQL LPD G E VTLLYRPGHYD+L
Sbjct: 39 TVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQ-GIKSVGDANTKA-----------MLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHTV-DMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDF--SGQLGSITLPDT---GAE--AMVTLLYRPGHYDVL 292
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|675188565|ref|XP_008903167.1| (hypothetical protein PPTG_10258 [Phytophthora parasitica INRA-310] >gi|568096613|gb|ETN11360.1| hypothetical protein PPTG_10258 [Phytophthora parasitica INRA-310] >gi|570955544|gb|ETP20691.1| hypothetical protein F441_05663 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 194.512 bits (493), Expect = 5.347e-57 Identity = 111/263 (42.21%), Postives = 149/263 (56.65%), Query Frame = 0
Query: 59 VGPLEPPSM----LLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASY--RDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVL-PDEWDGGKEEGVPVTLLYRPGHYDLL 314
VGPL M L Y N F+ G++ L RY +RR+R DGNCF+R F+FA L+ G G GG+ + R ++ SK+ L+ +GY +VAID FWE FV+ L A+ +S ++L F G + Y+VWY RLLT+GY+KK+ E ++ F+D Y + + FC EVEP GKEC+Q QI AL AL V V+IEYLDG A PG L +V P ++E V +TLLYRPGHYD+L
Sbjct: 15 VGPLLSDRMSVLCLKAEYVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTG-----------GAGGEDSNAALRS---RIQDKIQMSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSA-GPGEDLQSYVCSPTVEATTQQEPVSITLLYRPGHYDIL 262
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|970644627|gb|KUF85402.1| (Ubiquitin thioesterase otubain [Phytophthora nicotianae]) HSP 1 Score: 192.971 bits (489), Expect = 1.023e-56 Identity = 105/246 (42.68%), Postives = 143/246 (58.13%), Query Frame = 0
Query: 72 YKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASY--RDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVL-PDEWDGGKEEGVPVTLLYRPGHYDLL 314
Y N F+ G++ L RY +RR+R DGNCF+R F+FA L+ G G GG+ + R ++ SK+ L+ +GY +VAID FWE FV+ L A+ +S ++L F G + Y+VWY RLLT+GY+KK+ E ++ F+D Y + + FC EVEP GKEC+Q QI AL AL V V+IEYLDG A PG L +V P ++E V +TLLYRPGHYD+L
Sbjct: 10 YVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTG-----------GAGGEDSNAALRS---RIQDKIQMSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSA-GPGEDLQSYVCSPTVEATTQQEPVSITLLYRPGHYDIL 240
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|566028010|gb|ETI50921.1| (hypothetical protein F443_05655 [Phytophthora parasitica P1569]) HSP 1 Score: 193.741 bits (491), Expect = 1.089e-56 Identity = 111/263 (42.21%), Postives = 148/263 (56.27%), Query Frame = 0
Query: 59 VGPLEPPSM----LLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASY--RDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVL-PDEWDGGKEEGVPVTLLYRPGHYDLL 314
VGPL M L Y N F+ G++ L RY +RR+R DGNCF+R F+FA L+ G G GG+ + R ++ SK L+ +GY +VAID FWE FV+ L A+ +S ++L F G + Y+VWY RLLT+GY+KK+ E ++ F+D Y + + FC EVEP GKEC+Q QI AL AL V V+IEYLDG A PG L +V P ++E V +TLLYRPGHYD+L
Sbjct: 15 VGPLLSDRMSVLCLKAEYVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTG-----------GAGGEDSNAALRS---RIQDKIQMSKNELMAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSA-GPGEDLQSYVCSPTVEATTQQEPVSITLLYRPGHYDIL 262
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|1214694812|gb|OWZ08759.1| (Ubiquitin thioesterase otubain [Phytophthora megakarya]) HSP 1 Score: 188.348 bits (477), Expect = 6.157e-55 Identity = 102/247 (41.30%), Postives = 141/247 (57.09%), Query Frame = 0
Query: 72 YKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEG-IEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASY--RDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVL-PDEWDGGKEEGVPVTLLYRPGHYDLL 314
Y N F+ G+E L RY +RR+R DGNCF+R F+FA L+ G +ED + R ++ SK+ L+ +GY +VAID FWE FV+ L A+ +S ++L F G + Y+VWY RLLT+GY+K+H + ++ F+D + + + FC EVEP GKEC+Q QI AL AL V V+IEYLDG A G L +V P ++E V +TLLYRPGHYD+L
Sbjct: 10 YVGNANANFMHGIESLNVRYEALRRVRGDGNCFFRGFIFALCERLLPSGGVEDSNAALRR-----------------RIQHKIQTSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKQHADTFQPFIDGLFPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSA-GSGQDLQSYVCSPTVETTSEQEPVSITLLYRPGHYDIL 238
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|1020521892|ref|XP_016100392.1| (PREDICTED: ubiquitin thioesterase OTUB1-like [Sinocyclocheilus grahami] >gi|1024924676|ref|XP_016348721.1| PREDICTED: ubiquitin thioesterase OTUB1-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 175.252 bits (443), Expect = 1.492e-49 Identity = 108/298 (36.24%), Postives = 168/298 (56.38%), Query Frame = 0
Query: 21 LSQSQAAGHNHQVEEDRDLLTIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHK-SLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVP-VTLLYRPGHYDLLVK 316
+SQ +A G N D IAQQ++I +IA S PLV + S+L + Y D+ + + + + DL ++Y+ +R+ R DGNCFYRAF F++L L+E+ KE RF SK L++ G+ E I+ F F++ +EA + S+ +L S+FNE V+ Y+V Y RL+TSGYL++ ++ ++ F++ R + +FC +EVEP KE + + I+AL +AL VC+++EY+D GG + H+ P E+G P + LLYRPGHYD+L K
Sbjct: 9 ISQKEADGLNCLA---YDEAIIAQQDKIQQEIATSIPLVSERQVLSVLKRDYADD-DTIYQQKIRDLQKKYSSIRKTRPDGNCFYRAFGFSHLESLLEDS-----------------------KELHRFKAIAAKSKQDLVSQGFTEFTIEDFHNTFMDLIEACDKQPSVGELLSSFNE-QSVSDYLVVYLRLVTSGYLQREEDFFQHFIEGG-RTVREFCQQEVEPMSKESDHIHIIALAQALNVCIQVEYMDR---GEGGTINHHIFP-------EDGEPKIFLLYRPGHYDILYK 267
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|1025381454|ref|XP_016400601.1| (PREDICTED: ubiquitin thioesterase OTUB1-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 175.252 bits (443), Expect = 2.203e-49 Identity = 108/298 (36.24%), Postives = 168/298 (56.38%), Query Frame = 0
Query: 21 LSQSQAAGHNHQVEEDRDLLTIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHK-SLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVP-VTLLYRPGHYDLLVK 316
+SQ +A G N D IAQQ++I +IA S PLV + S+L + Y D+ + + + + DL ++Y+ +R+ R DGNCFYRAF F++L L+E+ KE RF SK L++ G+ E I+ F F++ +EA + S+ +L S+FNE V+ Y+V Y RL+TSGYL++ ++ ++ F++ R + +FC +EVEP KE + + I+AL +AL VC+++EY+D GG + H+ P E+G P + LLYRPGHYD+L K
Sbjct: 29 ISQKEADGLNCLA---YDEAIIAQQDKIQQEIATSIPLVSERQVLSVLKRDYADD-DTIYQQKIRDLQKKYSSIRKTRPDGNCFYRAFGFSHLESLLEDS-----------------------KELHRFKAIAAKSKQDLVSQGFTEFTIEDFHNTFMDLIEACDKQPSVGELLSSFNE-QSVSDYLVVYLRLVTSGYLQREEDFFQHFIEGG-RTVREFCQQEVEPMSKESDHIHIIALAQALNVCIQVEYMDR---GEGGTINHHIFP-------EDGEPKIFLLYRPGHYDILYK 287
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|1101568748|ref|XP_018950091.1| (PREDICTED: ubiquitin thioesterase OTUB1-like [Cyprinus carpio] >gi|966712863|gb|KTG45101.1| hypothetical protein cypCar_00026763 [Cyprinus carpio]) HSP 1 Score: 172.94 bits (437), Expect = 8.894e-49 Identity = 107/298 (35.91%), Postives = 167/298 (56.04%), Query Frame = 0
Query: 21 LSQSQAAGHNHQVEEDRDLLTIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHK-SLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVP-VTLLYRPGHYDLLVK 316
+SQ +A G N D +AQQ++I +IA S PLV + S+L + Y D+ + + + + DL ++Y+ +R+ R DGNCFYRAF F++L L+E+ KE RF SK L++ G+ E I+ F F++ +E + S+ +L S+FNE V+ Y+V Y RL+TSGYL++ ++ ++ F++ R + +FC +EVEP KE + + I+AL +AL VC+++EY+D GG + H+ P E+G P V LLYRPGHYD+L K
Sbjct: 11 ISQKEADGLNCLA---YDEAIVAQQDKIQQEIATSIPLVSERQVLSVLKREYADD-DTIYQQKIRDLQKKYSSIRKTRPDGNCFYRAFGFSHLESLLEDS-----------------------KELHRFKAIAAKSKQDLVSQGFTEFTIEDFHNTFMDLIETCDKQPSVGELLSSFNE-QSVSDYLVVYLRLVTSGYLQREEDFFQHFIEGG-RTVREFCQQEVEPMSKESDHIHIIALAQALNVCIQVEYMDR---GEGGTVNHHIFP-------EDGEPKVFLLYRPGHYDILYK 269
BLAST of EWM22879.1 vs. NCBI_GenBank
Match: gi|308321460|gb|ADO27881.1| (ubiquitin thioesterase otub1 [Ictalurus furcatus]) HSP 1 Score: 172.94 bits (437), Expect = 9.902e-49 Identity = 110/305 (36.07%), Postives = 167/305 (54.75%), Query Frame = 0
Query: 14 EDVHENGLSQSQAAGHNHQVEEDRDLLTIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHK-SLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVP-VTLLYRPGHYDLLVK 316
E+ E G++Q G N D IAQQ+ I +IA + PLV + ++L + Y ++ + + + + DL ++Y+ +R+ R DGNCFYRAF FAYL L+++ KE RF SK L++ G+ E I+ F F++ +E + SL++L ++FNE V+ Y+V Y RL+TSGYL++ E ++ F++ R + +FC +EVEP KE + V I+AL +AL VC+ +EY+D GG + HV P E+G P V LLYRPGHYD+L K
Sbjct: 4 EEQQEEGMTQKDIDGLNCLA---YDEAIIAQQDRIQQEIATNIPLVSEQQDLAILKKEYAED-DTIYQQKIRDLQKKYSFIRKTRPDGNCFYRAFGFAYLESLLDDS-----------------------KELHRFKAIAAKSKQDLVSQGFTEFTIEDFHNTFMDLIEVCDKQPSLAELLNSFNE-QSVSDYLVVYLRLVTSGYLQREDEFFQYFIEGG-RTVREFCQQEVEPMSKESDHVHIIALAQALSVCILVEYMDR---GEGGTVNHHVFP-------EDGQPKVFLLYRPGHYDILYK 269 The following BLAST results are available for this feature:
BLAST of EWM22879.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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