EWM29908.1, cds779 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|585112491|gb|EWM29908.1| (conserved protein with yshh some fused to [Nannochloropsis gaditana]) HSP 1 Score: 616.69 bits (1589), Expect = 0.000e+0 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
Query: 1 MPQATEEKEGSEDGVDSALLRGCLQRQLDELEALELIYPPTSPSFPPSFPAICIEETSRIAVLSALSVDIKKSVQFLSSRDLPCLALTVGTCPRLGISLPASYPELRGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHLLPLIQEMQSWLEELEKAGQETHKAASAQCVGGVAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEERELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
MPQATEEKEGSEDGVDSALLRGCLQRQLDELEALELIYPPTSPSFPPSFPAICIEETSRIAVLSALSVDIKKSVQFLSSRDLPCLALTVGTCPRLGISLPASYPELRGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHLLPLIQEMQSWLEELEKAGQETHKAASAQCVGGVAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEERELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK
Sbjct: 1 MPQATEEKEGSEDGVDSALLRGCLQRQLDELEALELIYPPTSPSFPPSFPAICIEETSRIAVLSALSVDIKKSVQFLSSRDLPCLALTVGTCPRLGISLPASYPELRGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHLLPLIQEMQSWLEELEKAGQETHKAASAQCVGGVAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEERELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|553196500|ref|XP_005856359.1| (conserved protein with yshh some fused to polo, partial [Nannochloropsis gaditana CCMP526] >gi|422292697|gb|EKU19999.1| conserved protein with yshh some fused to polo, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 189.889 bits (481), Expect = 7.211e-58 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query: 160 LEKAGQETHKAASAQCVGGVAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIR 250
LEKAGQETHKAASAQCVGGVAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIR
Sbjct: 1 LEKAGQETHKAASAQCVGGVAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIR 91
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|675179685|ref|XP_008898727.1| (hypothetical protein PPTG_06541 [Phytophthora parasitica INRA-310] >gi|568101710|gb|ETN16396.1| hypothetical protein PPTG_06541 [Phytophthora parasitica INRA-310]) HSP 1 Score: 129.413 bits (324), Expect = 1.184e-31 Identity = 106/318 (33.33%), Postives = 156/318 (49.06%), Query Frame = 0
Query: 12 EDGVDSALLRGCLQRQLDELEALELIYPPTSPSFPPSFPAICIEETSRIAVLSALS------------VDIKKSVQFLS---SRDLPCLALTVGTCPRLGISLPASYPEL-RGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHL--LPLIQEMQSWLEELEKAGQETHKAASAQCVGG---VAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEE----RELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
EDG SA Q+QL+ELE + ++P + I+E +++++ +S I+ ++ + R++P L L CPR P + P L + P + E G L+T ++ + G+ + L L Q+M +L +++ + + A VG + + R IYFHHII +KR + A LGG+SK GWPGVV+VEG E V+ YVR LQ LRWK+I VRGE+ +E C+GD +D +RRL R F E E G+S LA R+AGL LF T MK
Sbjct: 7 EDGGLSAT-----QQQLEELECMRSMFPFDG--------ELKIDEATKVSLEDFVSGGSGADKSPRPERQIRYTLYYKDLAYGREVPSLTLM---CPR---RYPDAEPMLFEVNCPQLSRVEMGRLNT--------ELAELTATACAGQEVVGLQLYQQMHEFLTQVQAISTVDEQQSKAVTVGPSEETSTPPTLGRRAIYFHHIIASNKRRVVKEWATELRLGGFSKIGWPGVVIVEGAEPNVQEYVRRLQHLRWKQITVRGEQTEELQEGCSGD--IDSLRRLSRSFHEFPENGMSDLATACRDAGLEELFLTTMK 295
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|566008208|gb|ETI31119.1| (hypothetical protein F443_21844 [Phytophthora parasitica P1569] >gi|567945692|gb|ETK71503.1| hypothetical protein L915_21239 [Phytophthora parasitica] >gi|568033731|gb|ETM31425.1| hypothetical protein L914_20981 [Phytophthora parasitica] >gi|570311887|gb|ETO59835.1| hypothetical protein F444_21867 [Phytophthora parasitica P1976] >gi|570935681|gb|ETP00938.1| hypothetical protein F441_21726 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 127.487 bits (319), Expect = 5.856e-31 Identity = 106/318 (33.33%), Postives = 155/318 (48.74%), Query Frame = 0
Query: 12 EDGVDSALLRGCLQRQLDELEALELIYPPTSPSFPPSFPAICIEETSRIAVLSALS------------VDIKKSVQFLS---SRDLPCLALTVGTCPRLGISLPASYPEL-RGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHL--LPLIQEMQSWLEELEKAGQETHKAASAQCVGG---VAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEE----RELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
EDG SA Q+QL+ELE + ++P + I+E +++++ +S I+ ++ + R++P L L CPR P + P L + P + E G L+T ++ + G+ + L L Q+M +L +++ + A VG + + R IYFHHII +KR + A LGG+SK GWPGVV+VEG E V+ YVR LQ LRWK+I VRGE+ +E C+GD +D +RRL R F E E G+S LA R+AGL LF T MK
Sbjct: 7 EDGGLSAT-----QQQLEELECMRSMFPFDG--------ELKIDEATKVSLEDFVSGGSGADKSPRPERQIRYTLYYKDLAYGREVPSLTLM---CPR---RYPDAEPMLFEVNCPQLSRVEMGRLNT--------ELAELTATACAGQEVVGLQLYQQMHEFLTQVQAISTVDELQSKAVTVGPSEETSTPPTLGRRAIYFHHIIASNKRRVVKEWATELRLGGFSKIGWPGVVIVEGAEPNVQEYVRRLQHLRWKQITVRGEQTEELQEGCSGD--IDSLRRLSRSFHEFPENGMSDLATACRDAGLEELFLTTMK 295
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|567974352|gb|ETL24947.1| (hypothetical protein L916_21106 [Phytophthora parasitica]) HSP 1 Score: 127.487 bits (319), Expect = 6.234e-31 Identity = 106/318 (33.33%), Postives = 155/318 (48.74%), Query Frame = 0
Query: 12 EDGVDSALLRGCLQRQLDELEALELIYPPTSPSFPPSFPAICIEETSRIAVLSALS------------VDIKKSVQFLS---SRDLPCLALTVGTCPRLGISLPASYPEL-RGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHL--LPLIQEMQSWLEELEKAGQETHKAASAQCVGG---VAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEE----RELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
EDG SA Q+QL+ELE + ++P + I+E +++++ +S I+ ++ + R++P L L CPR P + P L + P + E G L+T ++ + G+ + L L Q+M +L +++ + A VG + + R IYFHHII +KR + A LGG+SK GWPGVV+VEG E V+ YVR LQ LRWK+I VRGE+ +E C+GD +D +RRL R F E E G+S LA R+AGL LF T MK
Sbjct: 7 EDGGLSAT-----QQQLEELECMRSMFPFDG--------ELKIDEATKVSLEDFVSGGSGADKSPRPERQIRYTLYYKDLAYGREVPSLTLM---CPR---RYPDAEPMLFEVNCPQLSRVEMGRLNT--------ELAELTATACAGQEVVGLQLYQQMHEFLTQVQAISTVDELQSKAVTVGPSEETSTPPTLGRRAIYFHHIIASNKRRVVKEWATELRLGGFSKIGWPGVVIVEGAEPNVQEYVRRLQHLRWKQITVRGEQTEELQEGCSGD--IDSLRRLSRSFHEFPENGMSDLATACRDAGLEELFLTTMK 295
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|570965956|gb|ETP29075.1| (hypothetical protein F442_21705 [Phytophthora parasitica P10297]) HSP 1 Score: 127.487 bits (319), Expect = 6.637e-31 Identity = 101/305 (33.11%), Postives = 150/305 (49.18%), Query Frame = 0
Query: 25 QRQLDELEALELIYPPTSPSFPPSFPAICIEETSRIAVLSALS------------VDIKKSVQFLS---SRDLPCLALTVGTCPRLGISLPASYPEL-RGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHL--LPLIQEMQSWLEELEKAGQETHKAASAQCVGG---VAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEE----RELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
Q+QL+ELE + ++P + I+E +++++ +S I+ ++ + R++P L L CPR P + P L + P + E G L+T ++ + G+ + L L Q+M +L +++ + A VG + + R IYFHHII +KR + A LGG+SK GWPGVV+VEG E V+ YVR LQ LRWK+I VRGE+ +E C+GD +D +RRL R F E E G+S LA R+AGL LF T MK
Sbjct: 15 QQQLEELECMRSMFPFDG--------ELKIDEATKVSLEDFVSGGSGADKSPRPERQIRYTLYYKDLAYGREVPSLTLM---CPR---RYPDAEPMLFEVNCPQLSRVEMGRLNT--------ELAELTATACAGQEVVGLQLYQQMHEFLTQVQAISTVDELQSKAVTVGPSEETSTPPTLGRRAIYFHHIIASNKRRVVKEWATELRLGGFSKIGWPGVVIVEGAEPNVQEYVRRLQHLRWKQITVRGEQTEELQEGCSGD--IDSLRRLSRSFHEFPENGMSDLATACRDAGLEELFLTTMK 295
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|568003821|gb|ETL78162.1| (hypothetical protein L917_20964 [Phytophthora parasitica]) HSP 1 Score: 127.102 bits (318), Expect = 8.264e-31 Identity = 104/310 (33.55%), Postives = 150/310 (48.39%), Query Frame = 0
Query: 12 EDGVDSALLRGCLQRQLDELEALELIYPPTSPSFPPSFPAICIEETSRIAVLSALSVDIKKSVQFL-------SSRDLPCLALTVGTCPRLGISLPASYPEL-RGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHL--LPLIQEMQSWLEELEKAGQETHKAASAQCVGG---VAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEE----RELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
EDG SA Q+QL+ELE + ++P + +E+ + S ++ +++ R++P L L CPR P + P L + P + E G L+T ++ + G+ + L L Q+M +L +++ + A VG + + R IYFHHII +KR + A LGG+SK GWPGVV+VEG E V+ YVR LQ LRWK+I VRGE+ +E C+GD +D +RRL R F E E G+S LA R+AGL LF T MK
Sbjct: 7 EDGGLSAT-----QQQLEELECMRSMFPFDGELKVDEATKVSLEDFVSGGSGADKSPRPERQIRYTLYYKDLAYGREVPSLTLM---CPR---RYPDAEPMLFEVNCPQLSRVEMGRLNT--------ELAELTATACAGQEVVGLQLYQQMHEFLTQVQAISTVDELQSKAVTVGPSEETSTPPTLGRRAIYFHHIIASNKRRVVKEWATELRLGGFSKIGWPGVVIVEGAEPNVQEYVRRLQHLRWKQITVRGEQTEELQEGCSGD--IDSLRRLSRSFHEFPENGMSDLATACRDAGLEELFLTTMK 295
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|873221186|emb|CEM34052.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 122.865 bits (307), Expect = 7.073e-29 Identity = 111/330 (33.64%), Postives = 148/330 (44.85%), Query Frame = 0
Query: 14 GVDSALLRGCLQRQLDELEALELIYPPTSPSFPPSFPAICIEET--SRIAVLSALSVDIKKSVQFLSSRDLPCLALTVGTCPRLGISLPASYPE-------LRGSLPIIRWKEGGNLSTLAKNEAMQRFTS--VSLSHDGGEHLLPLIQEMQSWLEELEKAGQETHKAA----------------------------SAQCVGGVAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEERELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
G D + C +RQL+E+E L +YP + I+E ++I + D+ +V FL DL T G P+L I+LP YP L LP R E E +R V + + L L+ E + EELE A Q AA SA + + R + Y HHI + KR +II+ AL LGG+SK G+PGVV+VEG E+ Y+ LQ LRWK VRGEE + +DDMRRL RGFEEL +G+ +A R+AGLG+LF T MK
Sbjct: 11 GSDYRDVSSCRRRQLEEIEVLMSMYPGPD--------ELIIDEVALTKIKSQEQSTDDLHFAVSFLDE-DLK----TEGESPQLCITLPPLYPHKSLRAELLSSYLPTHRLAECEEALKERAREWAERGEECVVDIVQSAKDSLADLVAEHRRETEELENALQAAQAAADDVADDDEEDDMSDDALAEELQLLELQASAAARPPAKQQQQLGRRVCYSHHIRAETKRRYIIQWALELRLGGFSKIGYPGVVIVEGPEEGCMEYITRLQRLRWKHFVVRGEEIIDVPASKCLDDMRRLPRGFEELGPKGMGRMADECRKAGLGALFLTCMK 327
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|970651043|gb|KUF89938.1| (Galactose-proton symporter [Phytophthora nicotianae]) HSP 1 Score: 125.561 bits (314), Expect = 1.380e-28 Identity = 83/221 (37.56%), Postives = 114/221 (51.58%), Query Frame = 0
Query: 93 PRLGISLPASYPELRGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHL--LPLIQEMQSWLEELEKAGQETHKAASAQCVGG---VAKFLVVCRCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEE----RELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
P L + P YP+ P++ LS + ++ + G+ + L L Q+M +L +++ + A VG + + R IYFHHII +KR + A LGG+SK GWPGVV+VEG E V+ YVR LQ LRWK+I VRGE+ +E C+GD +D +RRL R F E E G+S LA R+AGL LF T MK
Sbjct: 504 PSLTLMCPRRYPDAE---PMLFEVNCPQLSRVEMGRLNTELAELTATACAGQEVVGLQLYQQMHEFLTQVQAISTVDELQSKAVTVGPSEETSTPPTLGRRAIYFHHIIASNKRRVVKEWATELRLGGFSKIGWPGVVIVEGAEPNVQEYVRRLQHLRWKQITVRGEQTEELQEGCSGD--IDSLRRLSRSFHEFPENGMSDLATACRDAGLEELFLTTMK 719
BLAST of EWM29908.1 vs. NCBI_GenBank
Match: gi|669137286|ref|XP_008604211.1| (hypothetical protein SDRG_00509 [Saprolegnia diclina VS20] >gi|530744546|gb|EQC42788.1| hypothetical protein SDRG_00509 [Saprolegnia diclina VS20]) HSP 1 Score: 115.546 bits (288), Expect = 9.131e-27 Identity = 90/287 (31.36%), Postives = 135/287 (47.04%), Query Frame = 0
Query: 21 RGCLQRQLDELEALELIYPPTSPSFPPSFPAICIEETSRIAVLSALSVD-IKKSVQFLSSRDLPCLALTVGTCPRLGISLPASYPELRGSLPIIRWKEGGNLSTLAKNEAMQRFTSVSLSHDGGEHLLPLIQEMQSWLEELEKAGQETHKAASAQCVGGVAKFLVVC--RCLIYFHHIINKHKREFIIREALAHSLGGYSKYGWPGVVVVEGEEQQVKAYVRLLQSLRWKEIRVRGEERELCTGDQGVDDMRRLHRGFEELDERGLSLLALRLREAGLGSLFATLMK 304
R L++Q +ELE L ++P ++ E + + A+++ + +++F + L P L + PA+YP + + LS K+ ++R S++ G L Q L+E++ E H A + + C R IYFHHII KR +I A LGG+SK GWPGV++VEG+E V YVR LQ LRWK++ VRGE+ E D +RRL ELD+ +S+LA +AG+ LF T MK
Sbjct: 8 RDHLRQQYEELECLRSMFPGDDELVIDAYVHAIYESAAAASGTEAITLPRLVATLRFQT-------CLIENAAPELELQYPATYPSSAMTFEL----RCPTLSRREKHSIVERLASIATDQVGEVVAFQLYQAAADILQEIQD---EAHLEAPVLALPPLVPIAQPCLGRRAIYFHHIIASSKRRVVIDWAKELHLGGFSKIGWPGVIIVEGDEPYVAEYVRRLQHLRWKQMVVRGEQVETSR-----DALRRLPTPLTELDD--MSILAAACADAGVTDLFLTTMK 273 The following BLAST results are available for this feature:
BLAST of EWM29908.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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