EWM22885.1, cds7784 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22885.1 vs. NCBI_GenBank
Match: gi|585103543|gb|EWM22885.1| (hypothetical protein Naga_100160g3 [Nannochloropsis gaditana]) HSP 1 Score: 444.121 bits (1141), Expect = 9.622e-158 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0 Query: 1 MQAFRIACLCLLQTSHPFAIMKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISELPDTVTEAFYGITVEPLVNSLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLIIMEEGYIYVRCSVFLIYVSMCASRRLCLGATTR 217 MQAFRIACLCLLQTSHPFAIMKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISELPDTVTEAFYGITVEPLVNSLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLIIMEEGYIYVRCSVFLIYVSMCASRRLCLGATTR Sbjct: 1 MQAFRIACLCLLQTSHPFAIMKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISELPDTVTEAFYGITVEPLVNSLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLIIMEEGYIYVRCSVFLIYVSMCASRRLCLGATTR 217
BLAST of EWM22885.1 vs. NCBI_GenBank
Match: gi|553183816|ref|XP_005853972.1| (hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526] >gi|422295089|gb|EKU22388.1| hypothetical protein NGA_0434301 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 312.383 bits (799), Expect = 2.819e-106 Identity = 153/174 (87.93%), Postives = 162/174 (93.10%), Query Frame = 0 Query: 21 MKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISELPDTVTEAFYGITVEPLVNSLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLIIMEEGYIYVR 194 MKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISE+P+ VTE YGITVEPLV+ LS KNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPK FANGTGTGTSFLP+PL+GLVLSKQYK+TSKIRIGKGIPSGTYVPF + V+LVGGD I EEG +YVR Sbjct: 1 MKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISEVPNNVTEVLYGITVEPLVSPLSSKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKIFANGTGTGTSFLPMPLNGLVLSKQYKVTSKIRIGKGIPSGTYVPFQIFVDLVGGDFITREEGQVYVR 174
BLAST of EWM22885.1 vs. NCBI_GenBank
Match: gi|585111994|gb|EWM29458.1| (hypothetical protein Naga_100083g24 [Nannochloropsis gaditana]) HSP 1 Score: 97.0561 bits (240), Expect = 1.575e-21 Identity = 76/197 (38.58%), Postives = 102/197 (51.78%), Query Frame = 0 Query: 25 SSLLVAVATLLS---NAAAQ-----EYTGSVCVKSLSVKAGRQATITTSFLISEL-------------------PDTVTEAFYGITVEPLVNSLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLIIMEEGYIYVR 194 SSL++A A ++S A AQ + G VK +SVKAG + T+TTSFL E P+ YG +E L N K T+ K+SK DV L ++RI PNTWRPK +N TG+ T+F+ +P GLV + YKI +K RIGK PSG+ + F V E GG ++ E +YVR Sbjct: 6 SSLILASAVIISAIGRATAQLFPDFDAIGHSTVKPISVKAGGRVTLTTSFLFLETRRRQLRELAFADEILYWATPNEADIPAYG-DLEELSNKN--KTKTSHPKSSKHGNSTDVRLVRSRIMPNTWRPKLRSNITGS-TNFMSIPTTGLVALEDYKIINKFRIGKRYPSGSVITFYVYAEY-GGFNLLQEFLDVYVR 197
BLAST of EWM22885.1 vs. NCBI_GenBank
Match: gi|553184967|ref|XP_005854180.1| (hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526] >gi|553192556|ref|XP_005855596.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422293459|gb|EKU20759.1| hypothetical protein NGA_0188502 [Nannochloropsis gaditana CCMP526] >gi|422294881|gb|EKU22181.1| hypothetical protein NGA_0188501 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 82.8037 bits (203), Expect = 1.122e-16 Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = 0 Query: 101 KTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLIIMEEGYIYVR 194 K+SK DV L ++RI PNTWRPK +N TG+ T+F+ +P GLV+ K YKI +K RIGK PSGT + F V V+ GG ++ E +YVR Sbjct: 41 KSSKHGNSTDVRLVRSRIIPNTWRPKLRSNITGS-TNFMSVPTTGLVVLKDYKIINKFRIGKRYPSGTVISFYVFVDY-GGSPLLDEVFDVYVR 132
BLAST of EWM22885.1 vs. NCBI_GenBank
Match: gi|585112813|gb|EWM30157.1| (hypothetical protein Naga_100115g3 [Nannochloropsis gaditana]) HSP 1 Score: 75.485 bits (184), Expect = 1.756e-13 Identity = 56/181 (30.94%), Postives = 87/181 (48.07%), Query Frame = 0 Query: 18 FAIMKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISELPDTVTEAFYGITVEPL----VNSLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLIIMEEGYIYVR 194 A M +FSS A +++ A VK L+V+ G + T T +F++S T+ + L + +L+ KN T K K S ++ +R +RISPN WRPK N + + +P +G +L K YK+ KIR+GKG+ T V V L+ G I E +Y++ Sbjct: 13 LAGMALFSSTTFVDAQVIAQA---------MVKPLAVRPGGRITATLNFVVSSFASNATDPAIAVGFATLGAQELAALNNKNRTTKGKASMDPLANELVIRGSRISPNKWRPKLRTNESEWYSVAWGIPKEGTLLKKVYKVVCKIRVGKGVERNTVRK--VSVTLIAGSYIFEESLDVYIK 182
BLAST of EWM22885.1 vs. NCBI_GenBank
Match: gi|585102369|gb|EWM21985.1| (hypothetical protein Naga_100745g2 [Nannochloropsis gaditana]) HSP 1 Score: 70.4774 bits (171), Expect = 1.033e-10 Identity = 44/137 (32.12%), Postives = 76/137 (55.47%), Query Frame = 0 Query: 49 VKSLSVKAGRQATITTSFLISELPDTVTEAFYGITVEPLVNSLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLII 185 + SL V G T+++ F+ E P++ + F +T+ ++ ++N +T K G ++T +++ + PNTWRPK + G + LP DG VL K YKI K+R+ +G+ SGT +PF++ V DL++ Sbjct: 208 LDSLVVSPGGPLTVSSDFIFVERPES--DVFVSLTIGQEASASGFRN-----RTQKAIGARELTFKRSTLRPNTWRPKPRYSIVGNEVVWQ-LPFDGFVLKKTYKIKWKLRVDRGVTSGTQLPFILRVGSNMQDLMV 336
BLAST of EWM22885.1 vs. NCBI_GenBank
Match: gi|585103321|gb|EWM22729.1| (hypothetical protein Naga_100561g2 [Nannochloropsis gaditana] >gi|585103322|gb|EWM22730.1| hypothetical protein Naga_100561g2 [Nannochloropsis gaditana]) HSP 1 Score: 70.0922 bits (170), Expect = 1.208e-10 Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 0 Query: 80 YGITVEPLVNSLSWKNHTAKNKTSKF---AGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFL-PLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGV 176 + +++P N +++ TA NKTSK DV ++ +++I+PNTWRPK G + + LP DG L K+YKIT +RIGK +PSGT +P + V Sbjct: 233 FACSLDPFFN---FQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSV 330
BLAST of EWM22885.1 vs. NCBI_GenBank
Match: gi|585103332|gb|EWM22739.1| (hypothetical protein Naga_100209g9 [Nannochloropsis gaditana]) HSP 1 Score: 69.3218 bits (168), Expect = 2.406e-10 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 0 Query: 80 YGITVEPLVN--SLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFL-PLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGV 176 + +++P N SL+ N T+K++ K DV ++ +++I+PNTWRPK G + + LP DG L K+YKIT +RIGK +PSGT +P + V Sbjct: 233 FACSLDPFFNFQSLTTGNKTSKHR--KDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSV 330
BLAST of EWM22885.1 vs. NCBI_GenBank
Match: gi|553178404|ref|XP_005852549.1| (hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526] >gi|422295984|gb|EKU23283.1| hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 63.929 bits (154), Expect = 2.893e-9 Identity = 57/182 (31.32%), Postives = 84/182 (46.15%), Query Frame = 0 Query: 9 LCLLQTS-HPFAIMKVFSSLLVAVATLLSNAAAQEYTGSVCVKSLSVKAGRQATITTSFLISELP--DTVTEAFYG--ITVEPLVNSLSWKNHTAKNKTSKFAGDVDVTLRKTRISPNTWRPKTFANGTGTGTSFLPLPLDGLVLSKQYKITSKIRIGKGIPSGTYVPFLVGVELVGGDLII 185 +C + TS PFA+ V S +A A L KSL GR+ T+ L E P D + G TV+ L + H+ K GD ++ ++ ++ PNTWRPK T ++ LP+ G+V K YKI +IR+G+G+ SGT +P V V DL++ Sbjct: 8 VCGIVTSLSPFALGTVISPTFLAQAYL---------------KSLVQAPGRRFTLLLDLLFLERPVEDVIVSCLLGGNATVQGHATRLL-QGHSTKVLKRARLGDEALSFQRGKLRPNTWRPKLRYVKTNDELAWT-LPVGGIVFGKTYKIKWRIRLGRGVASGTELPLTVRVADWMEDLVV 172 The following BLAST results are available for this feature:
BLAST of EWM22885.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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