EWM22894.1, cds7781 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22894.1 vs. NCBI_GenBank
Match: gi|585103553|gb|EWM22894.1| (hypothetical protein Naga_100320g4 [Nannochloropsis gaditana]) HSP 1 Score: 322.783 bits (826), Expect = 8.430e-112 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query: 1 MTYWGIITPGKDSKRSGLPPPSPRRGDDLPIVYSPKRGQPSTHDNLIGGEMTSMNRLCSLFQRSDSNLSEASDVQTLRREKKWLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLASMEKSEEISEQKETIKSRNILNTSHE 156
MTYWGIITPGKDSKRSGLPPPSPRRGDDLPIVYSPKRGQPSTHDNLIGGEMTSMNRLCSLFQRSDSNLSEASDVQTLRREKKWLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLASMEKSEEISEQKETIKSRNILNTSHE
Sbjct: 1 MTYWGIITPGKDSKRSGLPPPSPRRGDDLPIVYSPKRGQPSTHDNLIGGEMTSMNRLCSLFQRSDSNLSEASDVQTLRREKKWLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLASMEKSEEISEQKETIKSRNILNTSHE 156
BLAST of EWM22894.1 vs. NCBI_GenBank
Match: gi|585112578|gb|EWM29975.1| (hypothetical protein Naga_100383g4 [Nannochloropsis gaditana]) HSP 1 Score: 297.745 bits (761), Expect = 1.556e-91 Identity = 146/156 (93.59%), Postives = 148/156 (94.87%), Query Frame = 0
Query: 1 MTYWGIITPGKDSKRSGLPPPSPRRGDDLPIVYSPKRGQPSTHDNLIGGEMTSMNRLCSLFQRSDSNLSEASDVQTLRREKKWLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLASMEKSEEISEQKETIKSRNILNTSHE 156
MTYWGIITPGKDS+RSGLPPPSPRRG DLPIVYSP RGQPST DNLIGGEM SMNRLC+L QRSDSNLSEASDVQTLRREKK LHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLA MEKSEEISEQKETIKSRNILNT HE
Sbjct: 1037 MTYWGIITPGKDSQRSGLPPPSPRRGGDLPIVYSPTRGQPSTSDNLIGGEMASMNRLCNLSQRSDSNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLALMEKSEEISEQKETIKSRNILNTFHE 1192
BLAST of EWM22894.1 vs. NCBI_GenBank
Match: gi|585112691|gb|EWM30059.1| (hypothetical protein Naga_100170g1 [Nannochloropsis gaditana]) HSP 1 Score: 205.682 bits (522), Expect = 6.105e-66 Identity = 108/156 (69.23%), Postives = 111/156 (71.15%), Query Frame = 0
Query: 1 MTYWGIITPGKDSKRSGLPPPSPRRGDDLPIVYSPKRGQPSTHDNLIGGEMTSMNRLCSLFQRSDSNLSEASDVQTLRREKKWLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLASMEKSEEISEQKETIKSRNILNTSHE 156
MTYWGI+TPGKDSKRSGLP PSPRRGDDLPIVYSP +GQPSTHDNLIGGEMTSMNRLC+L Q RRILT DIAPVEKQYERYIHIKSKLATLASMEKSEEISEQKETIKSRNILNT E
Sbjct: 1 MTYWGIVTPGKDSKRSGLPLPSPRRGDDLPIVYSPTQGQPSTHDNLIGGEMTSMNRLCNLSQ--------------------------------------RRILTVNDIAPVEKQYERYIHIKSKLATLASMEKSEEISEQKETIKSRNILNTFRE 118
BLAST of EWM22894.1 vs. NCBI_GenBank
Match: gi|299473427|emb|CBN77824.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 58.9214 bits (141), Expect = 2.597e-7 Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 0
Query: 77 LRREKKWLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATL 129
L++EK+ LHV+L+ FE F+E+ GR + +DIAPVE +Y++Y IK +LA L
Sbjct: 657 LKKEKRVLHVMLKNFEKEFKEKNGREVSCPEDIAPVEGEYQKYKMIKKRLAQL 709 The following BLAST results are available for this feature:
BLAST of EWM22894.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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