EWM22896.1, cds7777 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|585103556|gb|EWM22896.1| (Major facilitator superfamily domain, general substrate transporter [Nannochloropsis gaditana]) HSP 1 Score: 649.432 bits (1674), Expect = 0.000e+0 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0 Query: 1 MLIFSILSAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGGEDDALFDYPALLYAAASEVRRGQGGRECGLCSPLGRLGGASRGDRSPLGGERTVTAMTGALRSIAPRHRLVF 326 MLIFSILSAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGGEDDALFDYPALLYAAASEVRRGQGGRECGLCSPLGRLGGASRGDRSPLGGERTVTAMTGALRSIAPRHRLVF Sbjct: 1 MLIFSILSAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGGEDDALFDYPALLYAAASEVRRGQGGRECGLCSPLGRLGGASRGDRSPLGGERTVTAMTGALRSIAPRHRLVF 326
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|553186407|ref|XP_005854412.1| (svop protein [Nannochloropsis gaditana CCMP526] >gi|422294648|gb|EKU21948.1| svop protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 385.571 bits (989), Expect = 3.269e-130 Identity = 188/190 (98.95%), Postives = 189/190 (99.47%), Query Frame = 0 Query: 84 LATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGGEDDALFDYPALLYAAASEV 273 +ATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGGEDDALFDYPALLYAAASE Sbjct: 1 MATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGGEDDALFDYPALLYAAASEA 190
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|167527135|ref|XP_001747900.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163773649|gb|EDQ87287.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 134.42 bits (337), Expect = 8.030e-32 Identity = 86/279 (30.82%), Postives = 137/279 (49.10%), Query Frame = 0 Query: 3 IFSILSAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNG--------IKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGGEDDALFDYPALLYAAASEV 273 I + SA +PNF L+ +R VG GIGG+AVPFD+L E P+E+RG L+ ++ FW G++ V G+AW +L+ GWR L L ++P+++ + +PES WLL GR+EDA VL +A + NG + + H ++ S ++ R G +G + +++E R+ Q A L + + F A + LLL WFS GL YYG +++ F+ +D F+YP+L + +E+ Sbjct: 129 IAGVASAFAPNFEVLVALRAFVGLGIGGMAVPFDILAEFMPSEYRGKALMGIEFFWTFGTLFVNGLAWAMLSAEGWRLLVGLCSVPVVLAMLSFPFMPESPHWLLTVGRSEDAVVVLRRAGELNGRPGAIGPNTRIVLHHETTPSIKYSLSSSPPSAKKYSRTDG-DGTSDSDSDEERERRAQVTIQDDAQSVGSLKEEAAHNSMSVRALFQAKYLRTTLLLF-----------TTWFSTGLTYYGTVLIAPEFFS--QSDDPTDFNYPSLFITSLAEL 393
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|514681447|ref|XP_004988309.1| (hypothetical protein PTSG_10923 [Salpingoeca rosetta] >gi|326434677|gb|EGD80247.1| hypothetical protein PTSG_10923 [Salpingoeca rosetta]) HSP 1 Score: 133.65 bits (335), Expect = 2.859e-31 Identity = 100/330 (30.30%), Postives = 139/330 (42.12%), Query Frame = 0 Query: 8 SAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLE------AEGGREGGREGGREG--GREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAF--------------------AAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILC----------------------------ASLFTLEGGEDDAL--------FDYPALLYAAASEV 273 SA S +F L+ +R +VGFGIGG+ VP+DLL E P++ RG L ++ FW G++ V G+AW +L GWRYL + P+ I LPES WLL R+EDA +V+ AA+ N +D L H ++ A EGG +GG + + G E R++ P A+H H S S L L RAT + LW IW +FG AYYG +I+ A +F+L+G + FDYPAL A A+E+ Sbjct: 140 SAFSVDFIMLVALRFLVGFGIGGMGVPYDLLAEFMPSKIRGKALFSIEFFWTFGTLFVNGLAWIMLDRLGWRYLVAVCAAPVAIAMLFFPFLPESPHWLLSVNRSEDALRVVRNAARLNKREDALPPNMRLVRMHNPPVDGKTFVIASSHHEGGVDGGDDEYYRDDAGYHREKNRELTPMLNGTANHKHANSSKHNNTAVSVNSVHNGGGSGSAVASDDDDVADDSGGSMSPLRLFNKANWRATVM-LWTIWSTFGFAYYGAVIITPEYFSGWDHKHNSTNGSSIHNDTLFLQQAPVFSLDGNQTHHHHHHHSTGHFDYPALFTAGAAEL 468
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|1022769653|gb|KZS14128.1| (Synaptic vesicle 2-related protein [Daphnia magna]) HSP 1 Score: 111.694 bits (278), Expect = 1.155e-23 Identity = 78/247 (31.58%), Postives = 117/247 (47.37%), Query Frame = 0 Query: 3 IFSILSAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLF 249 IF +LS+ SP F ++L++R +VGF IG L E P + RG ++L+ FW LG+ V +A ++ GWR+L L+T+P+ + + C LPES+R+L GRTE+A VL + A+ NG L L D S + G G A V P+ P + +S+S + P L LL P L+ T+L LW IW + YYG++++ L Sbjct: 167 IFGLLSSFSPTFFWILLLRLLVGFAIGCTPQSVTLYAEFLPVQQRGKCVVLLDSFWALGACFEVLLALIIMPTLGWRWLLALSTIPVFVFTLVCAWLPESARFLAANGRTEEALAVLRRIAEENGKPMLAGRLIV---DDLTS--------------NDSGTSGSA-------VSPSVPGNGDMNSLVSLSSDLRWKSP----------LQRLLSPELKLTSLLLWFIWLACAFCYYGMVLMSTELL 379
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|1129203094|gb|OLQ05776.1| (Synaptic vesicle 2-related protein [Symbiodinium microadriaticum]) HSP 1 Score: 108.997 bits (271), Expect = 2.627e-23 Identity = 85/277 (30.69%), Postives = 122/277 (44.04%), Query Frame = 0 Query: 4 FSILSAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLL-LPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFT--LEGGED----DALFDYPALLYAAASEV 273 F L+A+ F LL+MR IVG G+ GL V FD+L E+ P+ RG M+ FW G + VV MAW +L + GW+ T A LP L+ S A + LPES RWL++ R +A ++ A+ NG+ D+R L+ HH +VS L L LR T L+WFSFG++YYGI++L +F +E GE + FD LL ++++E+ Sbjct: 18 FGFLTALCQGFYSLLIMRAIVGVGVAGLPVGFDILAEAMPSSGRGKFGFYMEFFWTAGGLYVVLMAWLLLEQLGWQIFTAAAALPTLVASLAGYMSLPESPRWLVDMDRESEALAIVKSWAKSNGV-DMRHQ----------------------------------------------QLIKSSHHTDNVS-----------------VLDLFRRSALRWKTFAHSLVWFSFGVSYYGIVMLLPRIFKKGVESGEVAQSCELDFDNKDLLISSSAEI 230
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|514701667|ref|XP_004998401.1| (hypothetical protein PTSG_00929 [Salpingoeca rosetta] >gi|326430656|gb|EGD76226.1| hypothetical protein PTSG_00929 [Salpingoeca rosetta]) HSP 1 Score: 108.997 bits (271), Expect = 8.987e-23 Identity = 91/289 (31.49%), Postives = 122/289 (42.21%), Query Frame = 0 Query: 8 SAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGG--REGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGGE----DDAL-----------------FDYPALLYAAASEV 273 SA S ++ L+ +R IVG GIGG+ VPFDLL E P RG LL ++ FW G++ V G+AW +L + GWRYL ++P+ I + LPES WLL R ++A KVL KAA+ N D L H E E E G GG + +V P +L R TT+ LW +W + G YYG +I+ F +GG D++ FDYPAL A+EV Sbjct: 178 SAFSVDYYMLVTLRFIVGVGIGGMGVPFDLLAEFMPPSIRGKALLGIEFFWTFGTLFVNGLAWIMLDDLGWRYLVGFCSVPVTIAMISFPFLPESPHWLLLMNRPDEALKVLHKAAKLNKRPDALPAHTRLVLSHEPQPEDGKTYEIADSTALLTETGDAGGDDMPTGSEVSPL----------------------------------MLFDKNNRMTTIMLWAVWATSGFTYYGTVIIAPEFFASQGGNSTSHDNSTIHPHQPNGTHTGGGSKDFDYPALFTTGAAEV 432
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|612389502|ref|XP_007510272.1| (predicted protein [Bathycoccus prasinos] >gi|412992637|emb|CCO18617.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 107.842 bits (268), Expect = 9.622e-23 Identity = 56/144 (38.89%), Postives = 91/144 (63.19%), Query Frame = 0 Query: 4 FSILSAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLE 147 F + S+ SPN L+ MR +VG GIGG +VP+DLL E P + RG +L+ + +++ +G + + +A+ VL GWRYLTLLA++P +++ L ES WLL +GRTE+A ++ K A N + +++S + +H AS++ Sbjct: 113 FGVASSFSPNVYVLVCMRFLVGVGIGGFSVPYDLLAEICPDKIRGQVLMSIWVWFAIGGILITELAYFVLDSRGWRYLTLLASVPPVLSLLFLGFLDESPSWLLAKGRTEEAEAIMDKIASTNKL-EMKSFKLEDEEEHHASVK 255
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|731328930|ref|XP_010675318.1| (PREDICTED: organic cation/carnitine transporter 7 [Beta vulgaris subsp. vulgaris] >gi|870862032|gb|KMT13279.1| hypothetical protein BVRB_4g085390 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 108.612 bits (270), Expect = 9.735e-23 Identity = 76/243 (31.28%), Postives = 116/243 (47.74%), Query Frame = 0 Query: 6 ILSAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASL 248 +LSA++ N+ FLL+ RCIVG G+G V E P RG ++L Q FW +GS+T +AW ++ GWR+L L+ LP I ++ PES R+L +GR E+A +VL A+ NG ++L + +E E + G +D +V P +K + + K++ +LL P L TTL LWL++F AYYG+++L L Sbjct: 105 VLSALATNYVFLLISRCIVGIGLGAGPVLLTWFLEFVPAPSRGKWMVLFQAFWTVGSITESALAWIIMPHMGWRWLLGLSALPSFILLAFYVITPESPRYLCLKGRKEEALEVLTTIAKING-EELPPGVL------VTDMEME-------------QKSSGTQDN---EVDP--------------------QKWKDSNISVVKSITVLLSPKLIRTTLLLWLVFFGNAFAYYGLVLLTTQL 304
BLAST of EWM22896.1 vs. NCBI_GenBank
Match: gi|514701665|ref|XP_004998400.1| (hypothetical protein PTSG_00928 [Salpingoeca rosetta] >gi|326430655|gb|EGD76225.1| hypothetical protein PTSG_00928 [Salpingoeca rosetta]) HSP 1 Score: 108.227 bits (269), Expect = 2.338e-22 Identity = 90/291 (30.93%), Postives = 124/291 (42.61%), Query Frame = 0 Query: 8 SAISPNFAFLLVMRCIVGFGIGGLAVPFDLLCESTPTEFRGNILLLMQMFWVLGSVTVVGMAWGVLTEHGWRYLTLLATLPLLITSFACLLLPESSRWLLEEGRTEDAWKVLIKAAQWNGIKDLRSHLFDLRWDHAASLEAEGGREGGREGGREGGREGGAEDEAARQVQPACPLLAHHHHRLSVSEGAPTEKPPSAFAAFFKTLPLLLVPGLRATTLWLWLIWFSFGLAYYGIIILCASLFTLEGG-------------------------EDDALFDYPALLYAAASEV 273 SA S ++ L+ +R IVG GIGG+ VPFDLL E P RG L+ ++ FW G++ V G+AW +L + GWRYL ++P+ + + LPES WLL R ++A + + KAA+ N +D L H E ED ++ + LL E PT S F K R T+ LW+ W SFG YYG +I+ F EGG +D+ FDYPAL A+EV Sbjct: 282 SAFSVDYYMLVTLRFIVGVGIGGMGVPFDLLAEFMPPSIRGKALISIEFFWTFGTLFVNGLAWIMLDDLGWRYLVGFCSVPVALAMLSFPFLPESPHWLLMMNRHDEALETIRKAAKINKRQDALPARMRLVLSH----------------------EPQPEDGKTYEIADSTALLP------GTVEDVPTASEVSPLMLFDKN--------NRMATITLWIAWASFGFTYYGTVIIAPEFF--EGGSGGSANSTANNGTSGNATGGNGTHINNDSNFDYPALFTTGAAEV 534 The following BLAST results are available for this feature:
BLAST of EWM22896.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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