EWM22897.1, cds7776 (CDS) Nannochloropsis gaditana

Overview
NameEWM22897.1
Unique Namecds7776
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:415219..415497 -
Alignment locationCM002473.1:414924..415007 -
Alignment locationCM002473.1:414673..414681 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22897.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101485g1.3219.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:415219..415497 -
CM002473.1supercontigCM002473.1:414924..415007 -
CM002473.1supercontigCM002473.1:414673..414681 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM22897.1 vs. NCBI_GenBank
Match: gi|585103559|gb|EWM22897.1| (hypothetical protein Naga_101485g1 [Nannochloropsis gaditana])

HSP 1 Score: 259.61 bits (662), Expect = 8.255e-88
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0 
Query:    1 MREYTTDFAPWYLMMSSNISNGGGLYASVAFGGVVAILAWMMFFLSGKELNDISTWRIVKLLTGGVDMRARRRATQHFRVTRCTWIEASTNDETCYRKYHLSILDKMLCPVTIINMHYFYEVS 123
            MREYTTDFAPWYLMMSSNISNGGGLYASVAFGGVVAILAWMMFFLSGKELNDISTWRIVKLLTGGVDMRARRRATQHFRVTRCTWIEASTNDETCYRKYHLSILDKMLCPVTIINMHYFYEVS
Sbjct:    1 MREYTTDFAPWYLMMSSNISNGGGLYASVAFGGVVAILAWMMFFLSGKELNDISTWRIVKLLTGGVDMRARRRATQHFRVTRCTWIEASTNDETCYRKYHLSILDKMLCPVTIINMHYFYEVS 123
[Close]
BLAST of EWM22897.1 vs. NCBI_GenBank
Match: gi|553186411|ref|XP_005854413.1| (hypothetical protein NGA_0221100, partial [Nannochloropsis gaditana CCMP526] >gi|422294649|gb|EKU21949.1| hypothetical protein NGA_0221100, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 257.684 bits (657), Expect = 1.918e-86
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0 
Query:    1 MREYTTDFAPWYLMMSSNISNGGGLYASVAFGGVVAILAWMMFFLSGKELNDISTWRIVKLLTGGVDMRARRRATQHFRVTRCTWIEASTNDETCYRKYHLSILDKMLCPVTIINMHYFYEVS 123
            MREYTTDFAPWYLMMSSNISNGGGLYASVAFGGVVAILAWMMFFLSGKELNDISTWRIVKLLTGGVDMRARRRATQHFRVTRCTWIEASTNDETCYRKYHLSILDKMLCPVTIINMHYFYE +
Sbjct:    1 MREYTTDFAPWYLMMSSNISNGGGLYASVAFGGVVAILAWMMFFLSGKELNDISTWRIVKLLTGGVDMRARRRATQHFRVTRCTWIEASTNDETCYRKYHLSILDKMLCPVTIINMHYFYEAT 123
The following BLAST results are available for this feature:
BLAST of EWM22897.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103559|gb|EWM22897.1|8.255e-88100.00hypothetical protein Naga_101485g1 [Nannochloropsi... [more]
gi|553186411|ref|XP_005854413.1|1.918e-8698.37hypothetical protein NGA_0221100, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7797rna7797Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications