EWM22898.1, cds7775 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|585103566|gb|EWM22898.1| (Ubiquinol-cytochrome c chaperone/UPF0174 [Nannochloropsis gaditana]) HSP 1 Score: 357.066 bits (915), Expect = 1.184e-124 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 Query: 1 MTSTASLRAVQGLLRSRHSGLRHVGSLAALSGAQSSPLLCPRHPSPRPAALSPPLSSSFSSASPSSSSPPLAADRTDAEPQVRATARTLSLPQRILHFFGMGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLWYVPAI 179 MTSTASLRAVQGLLRSRHSGLRHVGSLAALSGAQSSPLLCPRHPSPRPAALSPPLSSSFSSASPSSSSPPLAADRTDAEPQVRATARTLSLPQRILHFFGMGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLWYVPAI Sbjct: 1 MTSTASLRAVQGLLRSRHSGLRHVGSLAALSGAQSSPLLCPRHPSPRPAALSPPLSSSFSSASPSSSSPPLAADRTDAEPQVRATARTLSLPQRILHFFGMGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLWYVPAI 179
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|953501437|emb|CEG37438.1| (Ubiquinol cytochrome c reductase assembly protein CBP3 [Plasmopara halstedii]) HSP 1 Score: 86.2705 bits (212), Expect = 7.614e-17 Identity = 56/168 (33.33%), Postives = 82/168 (48.81%), Query Frame = 0 Query: 22 RHVGSLAALSGAQSSPLLCPRHPSPRPAALSPPLSSSFSSASPSSSSPPLAADRTDAEP--------------QVRATARTLSLPQRILHFFG-MGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLW 174 RH + G+ SS L PRH AA L +F+SA+ ++ A TD P V + + + G + E + RNS A+ QSC++ +Y +S SFRA LL+VHVW++H+RL +EGE+GK+++E LFDRLW Sbjct: 18 RHNSGGIEVKGS-SSLLFYPRHV----AAECLTLHRAFASAASVEAARKFAWAETDIAPPSPGRGIIGRSSNVDVTKSENPIQRWHWLWKMLGFLNEDDRLFRNSTAVFQSCMNYTARPEYYSELGISKSFRAQQALLMVHVWLVHRRLALEGEQGKVMQELLFDRLW 180
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|568010726|gb|ETL84909.1| (hypothetical protein L917_15392 [Phytophthora parasitica]) HSP 1 Score: 80.4925 bits (197), Expect = 9.184e-15 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 101 MGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLW 174 + E + R+S A+ QSC++ +YRA +S SFRA LL+VHVW++H+RL +E E+GKI++E +FDRLW Sbjct: 106 LNEDDRLFRHSTAVFQSCMNHTARPEYYRALGLSRSFRAQQALLMVHVWLVHRRLALEDEQGKIMQELMFDRLW 179
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|695432038|ref|XP_009530837.1| (hypothetical protein PHYSODRAFT_513194 [Phytophthora sojae] >gi|348673589|gb|EGZ13408.1| hypothetical protein PHYSODRAFT_513194 [Phytophthora sojae]) HSP 1 Score: 78.9518 bits (193), Expect = 9.755e-15 Identity = 34/74 (45.95%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 101 MGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLW 174 + E + R+S A+ QSC++Q +YRA + SFRA LL+ HVW++H+RL +EG++GKI++E +FDRLW Sbjct: 5 LNEDDRLFRHSTAVFQSCMNQTARPEYYRALGLPRSFRAQQALLMAHVWIVHRRLALEGDQGKIMQELMFDRLW 78
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|570318851|gb|ETO66799.1| (hypothetical protein F444_16113 [Phytophthora parasitica P1976]) HSP 1 Score: 80.4925 bits (197), Expect = 1.059e-14 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 101 MGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLW 174 + E + R+S A+ QSC++ +YRA +S SFRA LL+VHVW++H+RL +E E+GKI++E +FDRLW Sbjct: 106 LNEDDRLFRHSTAVFQSCMNHTARPEYYRALGLSRSFRAQQALLMVHVWLVHRRLALEDEQGKIMQELMFDRLW 179
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|675204669|ref|XP_008911219.1| (hypothetical protein PPTG_15680 [Phytophthora parasitica INRA-310] >gi|568088589|gb|ETN03446.1| hypothetical protein PPTG_15680 [Phytophthora parasitica INRA-310] >gi|570973283|gb|ETP35950.1| hypothetical protein F442_15981 [Phytophthora parasitica P10297] >gi|970629527|gb|KUF76762.1| Ubiquinol-cytochrome-c reductase complex assembly factor 1 [Phytophthora nicotianae] >gi|970657948|gb|KUF95772.1| Kinesin protein [Phytophthora nicotianae]) HSP 1 Score: 80.4925 bits (197), Expect = 1.089e-14 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 101 MGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLW 174 + E + R+S A+ QSC++ +YRA +S SFRA LL+VHVW++H+RL +E E+GKI++E +FDRLW Sbjct: 106 LNEDDRLFRHSTAVFQSCMNHTARPEYYRALGLSRSFRAQQALLMVHVWLVHRRLALEDEQGKIMQELMFDRLW 179
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|568040644|gb|ETM38092.1| (hypothetical protein L914_15524 [Phytophthora parasitica]) HSP 1 Score: 80.4925 bits (197), Expect = 1.089e-14 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 101 MGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLW 174 + E + R+S A+ QSC++ +YRA +S SFRA LL+VHVW++H+RL +E E+GKI++E +FDRLW Sbjct: 106 LNEDDRLFRHSTAVFQSCMNHTARPEYYRALGLSRSFRAQQALLMVHVWLVHRRLALEDEQGKIMQELMFDRLW 179
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|567952572|gb|ETK78244.1| (hypothetical protein L915_15674 [Phytophthora parasitica] >gi|570942663|gb|ETP07920.1| hypothetical protein F441_15957 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 80.1073 bits (196), Expect = 1.383e-14 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 101 MGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLW 174 + E + R+S A+ QSC++ +YRA +S SFRA LL+VHVW++H+RL +E E+GKI++E +FDRLW Sbjct: 106 LNEDDRLFRHSTAVFQSCMNYTARPEYYRALGLSRSFRAQQALLMVHVWLVHRRLALEDEQGKIMQELMFDRLW 179
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|567981236|gb|ETL31679.1| (hypothetical protein L916_15569 [Phytophthora parasitica]) HSP 1 Score: 80.1073 bits (196), Expect = 1.457e-14 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 101 MGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLW 174 + E + R+S A+ QSC++ +YRA +S SFRA LL+VHVW++H+RL +E E+GKI++E +FDRLW Sbjct: 106 LNEDDRLFRHSTAVFQSCMNYTARPEYYRALGLSRSFRAQQALLMVHVWLVHRRLALEDEQGKIMQELMFDRLW 179
BLAST of EWM22898.1 vs. NCBI_GenBank
Match: gi|566015119|gb|ETI38030.1| (hypothetical protein F443_16128 [Phytophthora parasitica P1569]) HSP 1 Score: 79.7221 bits (195), Expect = 1.595e-14 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 101 MGESMKRTRNSEALLQSCISQAGNTIFYRAGRVSDSFRAAHGLLIVHVWMLHKRLLMEGEEGKILEEALFDRLW 174 + E + R+S A+ QSC++ +YRA +S SFRA LL+VHVW++H+RL +E E+GKI++E +FDRLW Sbjct: 106 LNEDDRLFRHSTAVFQSCMNYTARPEYYRALGLSRSFRAQQALLMVHVWLVHRRLALEDEQGKIMQELMFDRLW 179 The following BLAST results are available for this feature:
BLAST of EWM22898.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|