EWM22903.1, cds7770 (CDS) Nannochloropsis gaditana

Overview
NameEWM22903.1
Unique Namecds7770
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:393004..393444 +

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Properties
Property NameValue
Protein idEWM22903.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101054g2.2120.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:393004..393444 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22903.1 vs. NCBI_GenBank
Match: gi|585103576|gb|EWM22903.1| (hypothetical protein Naga_101054g2 [Nannochloropsis gaditana])

HSP 1 Score: 298.516 bits (763), Expect = 1.576e-102
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
Query:    1 MIERTLDRIKLHKGGQHRRKTMSFPRSRYPSIHRTDHAYRQTWHIHPTCRRARHQEKRCSRAGKRGKNQDQQGAGGLLLLTCVRIKRRSSSRLALCSFWASTDHAVDPKAFRCGNMSPSRCHDWRLGGRLPLGKEGGEARKRRGEV 146
            MIERTLDRIKLHKGGQHRRKTMSFPRSRYPSIHRTDHAYRQTWHIHPTCRRARHQEKRCSRAGKRGKNQDQQGAGGLLLLTCVRIKRRSSSRLALCSFWASTDHAVDPKAFRCGNMSPSRCHDWRLGGRLPLGKEGGEARKRRGEV
Sbjct:    1 MIERTLDRIKLHKGGQHRRKTMSFPRSRYPSIHRTDHAYRQTWHIHPTCRRARHQEKRCSRAGKRGKNQDQQGAGGLLLLTCVRIKRRSSSRLALCSFWASTDHAVDPKAFRCGNMSPSRCHDWRLGGRLPLGKEGGEARKRRGEV 146          
The following BLAST results are available for this feature:
BLAST of EWM22903.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103576|gb|EWM22903.1|1.576e-102100.00hypothetical protein Naga_101054g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7791rna7791Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications