EWM22908.1, cds7765 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22908.1 vs. NCBI_GenBank
Match: gi|585103586|gb|EWM22908.1| (hypothetical protein Naga_100625g3 [Nannochloropsis gaditana]) HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 Query: 1 MRVLLTLACLASCALTFTAAHSPYDTNGNDHDNQHHQQQPPPPGYSPNGMPSGNNNSPPGPGNTNYPPTQGNNPYSPLQGSGNYPGAQTNGNYPPQAPGSYPPNQGGSNYPPNQGAGPYSPAQPNGNYPSGQGNYPPGQGQGNYPQGSPYGNQGGGSTGTYGPGGMGGGGQMPGGYPPMPNGNNNYPPNQAYPPQRAPMNNYGPAGVGGMPMQGMQGGSPPGGMLKGGSASYPPAQGAAMNGSPVANTMQSNDPKASPVPPADPTKNGNSKDAVLSSLEQASAPVASSPATVPSRSTNLRGGN 303 MRVLLTLACLASCALTFTAAHSPYDTNGNDHDNQHHQQQPPPPGYSPNGMPSGNNNSPPGPGNTNYPPTQGNNPYSPLQGSGNYPGAQTNGNYPPQAPGSYPPNQGGSNYPPNQGAGPYSPAQPNGNYPSGQGNYPPGQGQGNYPQGSPYGNQGGGSTGTYGPGGMGGGGQMPGGYPPMPNGNNNYPPNQAYPPQRAPMNNYGPAGVGGMPMQGMQGGSPPGGMLKGGSASYPPAQGAAMNGSPVANTMQSNDPKASPVPPADPTKNGNSKDAVLSSLEQASAPVASSPATVPSRSTNLRGGN Sbjct: 1 MRVLLTLACLASCALTFTAAHSPYDTNGNDHDNQHHQQQPPPPGYSPNGMPSGNNNSPPGPGNTNYPPTQGNNPYSPLQGSGNYPGAQTNGNYPPQAPGSYPPNQGGSNYPPNQGAGPYSPAQPNGNYPSGQGNYPPGQGQGNYPQGSPYGNQGGGSTGTYGPGGMGGGGQMPGGYPPMPNGNNNYPPNQAYPPQRAPMNNYGPAGVGGMPMQGMQGGSPPGGMLKGGSASYPPAQGAAMNGSPVANTMQSNDPKASPVPPADPTKNGNSKDAVLSSLEQASAPVASSPATVPSRSTNLRGGN 303
BLAST of EWM22908.1 vs. NCBI_GenBank
Match: gi|565404653|ref|XP_006367746.1| (PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Solanum tuberosum]) HSP 1 Score: 71.2478 bits (173), Expect = 3.866e-10 Identity = 53/151 (35.10%), Postives = 70/151 (46.36%), Query Frame = 0 Query: 1 MRVLLTLACLASCALTFTAAHSP---YDTNGNDHDNQHHQQQPPPPGYSPNGMPSGNNNSPPGPGNTNYPPTQGNNPYSPLQGSGNYPGAQTNGNYPPQA-PGSYPPNQGGSNYPPNQGAGPYSPAQPNGNYP--SGQGNYPPGQGQGNYP 145 ++VL L + F S ++ N N Q + +P N G + PP G +YPP G Y P G G+YP G+YPP++ G YPP G +YPP G G Y P G+YP SG G+YPP G G+YP Sbjct: 205 LKVLKALESVIGHLRKFLVDQSVLPLFEKNYNTPSVQERETEPWSERTMLNTSRPGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYP 355 HSP 2 Score: 66.2402 bits (160), Expect = 1.475e-8 Identity = 44/97 (45.36%), Postives = 54/97 (55.67%), Query Frame = 0 Query: 52 SGNNNSPPGPGNTNYPPTQGNNPYSPLQGSGNYPGAQTNGNYPPQA-PGSYPPNQGGSNYPPNQGAGPYSPAQPNGNYP--SGQGNYPPGQGQGNYP 145 SG + PP G +YPP G Y P G G+YP G+YPP++ G YPP G +YPP G G Y P G+YP SG G+YPP G G+YP Sbjct: 277 SGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYPPRSGLGDYP 373 The following BLAST results are available for this feature:
BLAST of EWM22908.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|