EWM22916.1, cds7757 (CDS) Nannochloropsis gaditana

Overview
NameEWM22916.1
Unique Namecds7757
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:360032..360679 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22916.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102593g1.7627.mrna
GbkeyCDS
End range.
End range360679
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:360032..360679 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22916.1 vs. NCBI_GenBank
Match: gi|585103600|gb|EWM22916.1| (hypothetical protein Naga_102593g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 397.512 bits (1020), Expect = 1.946e-139
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0 
Query:    1 SHPSYIHDRLEDLEICSITDEMQHVLTLIHRKVPPSLPPSLSPSLPPSLPLSFSPLSPPSTPFARLSPPVPRLFSLKSEPNIFMDVVQRPMAPPSVPPSVPPSVPPSVPPSVPPSVPPSVPPSVPPSVRPSVPPSVPPSVPSQISSLMAVLRNKHHLSFSMNAASITLYQVLQQTQRANGLGYQQEVSFPPSPLSLRSFSSFFYATHVTRVSHQD 215
            SHPSYIHDRLEDLEICSITDEMQHVLTLIHRKVPPSLPPSLSPSLPPSLPLSFSPLSPPSTPFARLSPPVPRLFSLKSEPNIFMDVVQRPMAPPSVPPSVPPSVPPSVPPSVPPSVPPSVPPSVPPSVRPSVPPSVPPSVPSQISSLMAVLRNKHHLSFSMNAASITLYQVLQQTQRANGLGYQQEVSFPPSPLSLRSFSSFFYATHVTRVSHQD
Sbjct:    1 SHPSYIHDRLEDLEICSITDEMQHVLTLIHRKVPPSLPPSLSPSLPPSLPLSFSPLSPPSTPFARLSPPVPRLFSLKSEPNIFMDVVQRPMAPPSVPPSVPPSVPPSVPPSVPPSVPPSVPPSVPPSVRPSVPPSVPPSVPSQISSLMAVLRNKHHLSFSMNAASITLYQVLQQTQRANGLGYQQEVSFPPSPLSLRSFSSFFYATHVTRVSHQD 215
The following BLAST results are available for this feature:
BLAST of EWM22916.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103600|gb|EWM22916.1|1.946e-139100.00hypothetical protein Naga_102593g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7778rna7778Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications