EWM22921.1, cds7752 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|585103617|gb|EWM22921.1| (trna-dihydrouridine synthase a [Nannochloropsis gaditana]) HSP 1 Score: 277.33 bits (708), Expect = 1.363e-94 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 Query: 1 MAACDGEEDRHARQLDILPVSFRDAFDESCGNLKPAHTLSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNVRYASR 132 MAACDGEEDRHARQLDILPVSFRDAFDESCGNLKPAHTLSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNVRYASR Sbjct: 1 MAACDGEEDRHARQLDILPVSFRDAFDESCGNLKPAHTLSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNVRYASR 132
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|698779661|ref|XP_009822874.1| (hypothetical protein H257_01396 [Aphanomyces astaci] >gi|574122535|gb|ETV88011.1| hypothetical protein H257_01396 [Aphanomyces astaci]) HSP 1 Score: 138.658 bits (348), Expect = 4.135e-37 Identity = 60/89 (67.42%), Postives = 76/89 (85.39%), Query Frame = 0 Query: 39 LSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNV 127 LS+APMM+WTDRHYRYMMR +TR T LYTEM+VD+TL+H++ +LD FLGHD EHPLA+QLGGS+P +GE A + E+YG F+EIN+NV Sbjct: 14 LSVAPMMDWTDRHYRYMMRLITRRTLLYTEMVVDATLMHQKHNLDYFLGHDSLEHPLALQLGGSNPAMLGEVAKMAESYGSFHEININV 102
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|669164844|ref|XP_008617984.1| (hypothetical protein SDRG_13663 [Saprolegnia diclina VS20] >gi|530730345|gb|EQC28587.1| hypothetical protein SDRG_13663 [Saprolegnia diclina VS20]) HSP 1 Score: 134.035 bits (336), Expect = 2.270e-35 Identity = 59/89 (66.29%), Postives = 74/89 (83.15%), Query Frame = 0 Query: 39 LSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNV 127 LS+APMM+WTDRHYR+MMR +TR T LYTEM+VD TLLH++++LD FLGHD+ EHPLA+QLGG+D +G A + E YG F+EINLNV Sbjct: 15 LSVAPMMDWTDRHYRFMMRQITRKTLLYTEMVVDQTLLHQKDNLDYFLGHDDIEHPLALQLGGNDVKSLGTVARMAETYGNFHEINLNV 103
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|673032372|ref|XP_008870147.1| (hypothetical protein, variant 3 [Aphanomyces invadans] >gi|574474147|gb|ETW01149.1| hypothetical protein, variant 3 [Aphanomyces invadans]) HSP 1 Score: 131.724 bits (330), Expect = 2.556e-35 Identity = 57/89 (64.04%), Postives = 75/89 (84.27%), Query Frame = 0 Query: 39 LSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNV 127 LS+APMM+WTDRHYRYMMR +TR T LYTEM+VD T++H++ +LD FLGHD E+PLA+Q+GGS+P +GE A + E+YG F+EIN+NV Sbjct: 14 LSVAPMMDWTDRHYRYMMRLITRRTLLYTEMVVDETIMHQKHNLDYFLGHDAVEYPLALQVGGSNPETLGEVAKMAESYGRFHEININV 102
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|813164848|ref|XP_012203484.1| (hypothetical protein SPRG_08867 [Saprolegnia parasitica CBS 223.65] >gi|641531872|gb|KDO25926.1| hypothetical protein SPRG_08867 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 132.88 bits (333), Expect = 5.398e-35 Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 0 Query: 39 LSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNV 127 LS+APMM+WTDRHYR+MMR +TR T LYTEM+VD TLLH++++LD FLGHD EHPLA+QLGG+D +G A + E YG F+EINLNV Sbjct: 10 LSVAPMMDWTDRHYRFMMRQITRKTLLYTEMVVDQTLLHQKDNLDYFLGHDNIEHPLALQLGGNDVESLGTVARMAETYGNFHEINLNV 98
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|1173948979|gb|OQR97057.1| (tRNA-dihydrouridine synthase [Achlya hypogyna]) HSP 1 Score: 132.494 bits (332), Expect = 9.337e-35 Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 0 Query: 39 LSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNV 127 LS+APMM+WTDRHYR+MMR +TR T LYTEM+VD TLLH++++ D FLGHD+ EHPLA+QLGG+D +G A L E YG F+EINLNV Sbjct: 14 LSVAPMMDWTDRHYRFMMRQITRKTLLYTEMVVDQTLLHQQDNFDYFLGHDDIEHPLALQLGGNDVTSLGTVARLAEQYGRFHEINLNV 102
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|673032366|ref|XP_008870144.1| (hypothetical protein H310_06752 [Aphanomyces invadans] >gi|574474144|gb|ETW01146.1| hypothetical protein H310_06752 [Aphanomyces invadans]) HSP 1 Score: 132.109 bits (331), Expect = 1.565e-34 Identity = 57/89 (64.04%), Postives = 75/89 (84.27%), Query Frame = 0 Query: 39 LSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNV 127 LS+APMM+WTDRHYRYMMR +TR T LYTEM+VD T++H++ +LD FLGHD E+PLA+Q+GGS+P +GE A + E+YG F+EIN+NV Sbjct: 14 LSVAPMMDWTDRHYRYMMRLITRRTLLYTEMVVDETIMHQKHNLDYFLGHDAVEYPLALQVGGSNPETLGEVAKMAESYGRFHEININV 102
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|566028856|gb|ETI51767.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|568054600|gb|ETM51379.1| hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 129.413 bits (324), Expect = 9.912e-34 Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 0 Query: 33 LKPAHTLSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNV 127 L P LSIAPMM+WTDRHYR+MMR +T+ T L+TEM+VD TLLH++++LD FLGHD E PLA+QLGG+ +G AA L ++YGGF EINLN Sbjct: 9 LPPVTRLSIAPMMDWTDRHYRFMMRMITKETLLFTEMVVDQTLLHQKKNLDYFLGHDPVEAPLALQLGGNSVEDLGAAAHLSQSYGGFCEINLNT 103
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|675186817|ref|XP_008902293.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|567966202|gb|ETK91656.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567994919|gb|ETL45067.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568024175|gb|ETL98216.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568097569|gb|ETN12311.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|570332570|gb|ETO80518.1| hypothetical protein, variant 4 [Phytophthora parasitica P1976] >gi|570332571|gb|ETO80519.1| hypothetical protein, variant 5 [Phytophthora parasitica P1976] >gi|570956560|gb|ETP21551.1| hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >gi|570956561|gb|ETP21552.1| hypothetical protein, variant 5 [Phytophthora parasitica CJ01A1] >gi|570991801|gb|ETP49460.1| hypothetical protein, variant 4 [Phytophthora parasitica P10297] >gi|570991802|gb|ETP49461.1| hypothetical protein, variant 5 [Phytophthora parasitica P10297]) HSP 1 Score: 129.413 bits (324), Expect = 1.013e-33 Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 0 Query: 33 LKPAHTLSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNV 127 L P LSIAPMM+WTDRHYR+MMR +T+ T L+TEM+VD TLLH++++LD FLGHD E PLA+QLGG+ +G AA L ++YGGF EINLN Sbjct: 9 LPPVTRLSIAPMMDWTDRHYRFMMRMITKETLLFTEMVVDQTLLHQKKNLDYFLGHDPVEAPLALQLGGNSVEDLGAAAHLSQSYGGFCEINLNT 103
BLAST of EWM22921.1 vs. NCBI_GenBank
Match: gi|970652650|gb|KUF91269.1| (tRNA-dihydrouridine synthase 2 [Phytophthora nicotianae]) HSP 1 Score: 129.413 bits (324), Expect = 1.768e-33 Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 0 Query: 33 LKPAHTLSIAPMMEWTDRHYRYMMRGLTRHTQLYTEMIVDSTLLHRREDLDIFLGHDECEHPLAVQLGGSDPVQVGEAAALCEAYGGFNEINLNV 127 L P LSIAPMM+WTDRHYR+MMR +T+ T L+TEM+VD TLLH++++LD FLGHD E PLA+QLGG+ +G AA L ++YGGF EINLN Sbjct: 4 LPPVTRLSIAPMMDWTDRHYRFMMRMITKETLLFTEMVVDQTLLHQKKNLDYFLGHDPVEAPLALQLGGNSVEDLGAAAHLSQSYGGFCEINLNT 98 The following BLAST results are available for this feature:
BLAST of EWM22921.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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