EWM22925.1, cds7748 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|585103629|gb|EWM22925.1| (Regulatory factor, effector, bacterial [Nannochloropsis gaditana]) HSP 1 Score: 150.984 bits (380), Expect = 2.224e-46 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSFLPKEGEGELEW 74
MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSFLPKEGEGELEW
Sbjct: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSFLPKEGEGELEW 74
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|702274239|ref|XP_010044056.1| (PREDICTED: uncharacterized protein LOC104433104 [Eucalyptus grandis]) HSP 1 Score: 58.5362 bits (140), Expect = 1.214e-8 Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDS 62
M+F++PA Y +P P D V ++E G+ GV+R+SG AT +TREK +RL E L +D
Sbjct: 112 MRFVLPAKYGRAEEVPRPLDERVVVREEEGRKYGVVRFSGVATEGVTREKAERLREWLERDG 173
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|702274243|ref|XP_010044057.1| (PREDICTED: uncharacterized protein LOC104433106 [Eucalyptus grandis]) HSP 1 Score: 58.151 bits (139), Expect = 1.610e-8 Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDS 62
M+F++PA Y +P P D V ++E G+ GV+R+SG AT +TREK +RL E L +D
Sbjct: 125 MRFVLPAKYGRAEEVPRPLDERVVVREEEGRKYGVVRFSGVATEGVTREKAERLREWLERDG 186
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|1179504764|ref|XP_020679537.1| (heme-binding-like protein At3g10130, chloroplastic [Dendrobium catenatum]) HSP 1 Score: 57.7658 bits (138), Expect = 1.802e-8 Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSF 63
MQF++PA+Y+ P PTD VR++E + GV+R+SG AT T ++ +RL L +D +
Sbjct: 105 MQFVLPANYAKAEDAPRPTDERVRIREEGERKYGVVRFSGLATEATTADRAERLRRSLERDGY 167
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|1045376272|dbj|GAU38182.1| (hypothetical protein TSUD_264080 [Trifolium subterraneum]) HSP 1 Score: 56.225 bits (134), Expect = 2.299e-8 Identity = 23/63 (36.51%), Postives = 41/63 (65.08%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSF 63
MQF +P+ Y + +P P D V ++EV G+ GV+++ G A++ + +EK+++L+ L KD F
Sbjct: 32 MQFTLPSMYEKVEQVPKPIDERVVIREVGGRKYGVVKFGGVASDEVVKEKVEKLKLSLEKDGF 94
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|1175846002|ref|XP_020576556.1| (heme-binding-like protein At3g10130, chloroplastic [Phalaenopsis equestris]) HSP 1 Score: 57.3806 bits (137), Expect = 2.682e-8 Identity = 24/63 (38.10%), Postives = 39/63 (61.90%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSF 63
MQF++PA Y+ P PTD VR++EV + GV+R+SG AT ++ ++L + L +D +
Sbjct: 105 MQFVLPAKYARAEDAPQPTDERVRIREVGERKYGVVRFSGVATETTAADRAEKLRKSLERDGY 167
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|1208397176|ref|NP_001235669.2| (SOUL heme-binding family protein [Glycine max]) HSP 1 Score: 56.9954 bits (136), Expect = 4.524e-8 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSF 63
MQF++PA Y P PTD V ++E + GV+++ G A+ + REK+++L E L KD F
Sbjct: 119 MQFVLPAVYGKAEEAPKPTDERVVIREEGERKYGVVKFGGVASEQVVREKVEKLRESLEKDGF 181
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|734306683|gb|KHM98940.1| (Heme-binding-like protein, chloroplastic [Glycine soja]) HSP 1 Score: 56.9954 bits (136), Expect = 4.708e-8 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSF 63
MQF++PA Y P PTD V ++E + GV+++ G A+ + REK+++L E L KD F
Sbjct: 111 MQFVLPAVYGKAEEAPKPTDERVVIREEGERKYGVVKFGGVASEQVVREKVEKLRESLEKDGF 173
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|1189383452|gb|OSX70781.1| (hypothetical protein BU14_0668s0002 [Porphyra umbilicalis]) HSP 1 Score: 55.8398 bits (133), Expect = 6.234e-8 Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSF 63
M+F++PA Y+++S P PTD+ V L VA TVGV RYSG ++ ++++ L L +D
Sbjct: 76 MRFLLPAKYAAVSDAPVPTDSKVHLTTVAPHTVGVRRYSGNSSLATCGDEVKALHAALARDGV 138
BLAST of EWM22925.1 vs. NCBI_GenBank
Match: gi|565475578|ref|XP_006295430.1| (hypothetical protein CARUB_v10024529mg [Capsella rubella] >gi|482564138|gb|EOA28328.1| hypothetical protein CARUB_v10024529mg [Capsella rubella]) HSP 1 Score: 56.6102 bits (135), Expect = 7.482e-8 Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSF 63
MQF++P+ Y+ P PTDA V ++E G+ GV+++SG A+ + EK+++L L KD F
Sbjct: 133 MQFLLPSIYTKPEEAPRPTDARVVIREEGGRKYGVVKFSGTASESVVSEKVKKLTSDLEKDGF 195 The following BLAST results are available for this feature:
BLAST of EWM22925.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|