EWM22932.1, cds7742 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|585103650|gb|EWM22932.1| (c-5 sterol desaturase [Nannochloropsis gaditana]) HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0 Query: 1 MASTAFLLLESLFLTGENDLFLRGAGGGAFLLWNAHTWLSHHFIAWGLLVLAGLEILACLVFAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPYPEEKGAVSGGGGGGGKKE 293 MASTAFLLLESLFLTGENDLFLRGAGGGAFLLWNAHTWLSHHFIAWGLLVLAGLEILACLVFAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPYPEEKGAVSGGGGGGGKKE Sbjct: 1 MASTAFLLLESLFLTGENDLFLRGAGGGAFLLWNAHTWLSHHFIAWGLLVLAGLEILACLVFAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPYPEEKGAVSGGGGGGGKKE 293
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|298712977|emb|CBJ26879.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 295.819 bits (756), Expect = 1.548e-96 Identity = 152/275 (55.27%), Postives = 193/275 (70.18%), Query Frame = 0 Query: 19 DLFLRGAGGG-AFLLWNA-HTWLSHHFIAWGLLVLAGLEILACLVFAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPYP--EEKGAVSGGGGGG 289 D+ ++GAGGG AF L NA TW H+ AW ++L GLE +A +V FGR + +I RGKHLD D F+AFN+ +T +F+YH +++LW + VAW V E+ + AL +VVYD YT+FHR LH R LYKHIHKHHHRQKAP+RGN DAVNVHP+EF+ GEYNHL A++LVSR+++PVH ++A AFIV GGF ASLNHTRFDI+ P +Y+VRYHD+HHW+PE NYGQY MLWD + GS K YP E++G GGG Sbjct: 16 DVLVKGAGGGVAFSLVNAADTWQWWHYPAWLSVILLGLEFVAAMVHVFGRASKAATIRPRGKHLDEFTPLDRLFVAFNRCSTAVFTYHAVQYLWYAPWGGRVAWGVSELGLASGLGALVAQYVVYDLFYTVFHRVLHLRGLYKHIHKHHHRQKAPTRGNADAVNVHPLEFLGGEYNHLLALHLVSRYVVPVHVVSAGAFIVAGGFFASLNHTRFDIRIPF----LYEVRYHDIHHWYPECNYGQYTMLWDWVMGSLKAYPAEEDRGERKRNLGGG 286
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|922887299|gb|KOO52938.1| (c-5 sterol desaturase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 247.284 bits (630), Expect = 1.734e-78 Identity = 122/236 (51.69%), Postives = 161/236 (68.22%), Query Frame = 0 Query: 47 GLLVLAGLEILACLV-FAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFD---IKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPYPEE 278 G + GLE+ V FAF R P +P RGKHLD + D FI F++LA + ++H L+F+ S V W++EE+T N C+ALPL FV+YD Y FHRALHH +Y +HKHHHRQ P+RGNTDA+NVHP EF+ GEYNH+ A+YLVSRF+LPVHAL+ + F+V GG LA+LNHTR D ++ P P++ VR HD HH P SNYGQY MLWD+ G+++ +P++ Sbjct: 2 GAVTQIGLELYRQGVPFAF---RSWPKLPARGKHLDEFASIDRQFIVFSQLAIVVMTFHYLQFMLTSPN---VLWKLEELTVANVCVALPLFFVIYDAFYAPFHRALHHHRVYAFVHKHHHRQVVPTRGNTDAINVHPFEFIMGEYNHVLAVYLVSRFVLPVHALSCVLFLVFGGALATLNHTRLDCNFLRIPFTKVPIFAVRAHDTHHAVPNSNYGQYTMLWDYAMGTYRAHPQD 231
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|551666303|ref|XP_005835913.1| (hypothetical protein GUITHDRAFT_105560 [Guillardia theta CCMP2712] >gi|428180064|gb|EKX48933.1| hypothetical protein GUITHDRAFT_105560 [Guillardia theta CCMP2712]) HSP 1 Score: 234.958 bits (598), Expect = 1.177e-73 Identity = 127/232 (54.74%), Postives = 157/232 (67.67%), Query Frame = 0 Query: 46 WGLLVLAGLEILACLVFAFGRLRRVPS-IPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPYP 276 W +++L GLE+++ LV + PS IP+RGKHLD L +D+ FI +NK TTLF+YH LRF WLS +AW EMT NT +A LFVVYDF Y ++HR LH R LYK IHKHHH Q APSRGN DAVNVHP+EF+ GEY HL AI F++P HA+ A F+VLGG LASLNHTR+DI P ++ + HD HH P NYGQY MLWD +FG++ P+P Sbjct: 7 WSVVILLGLELMSYLVNEIPQRFFNPSAIPIRGKHLDVLSWKDISFITWNKFTTTLFTYHALRFCWLSPR---IAWGWSEMTILNTVIAFFSLFVVYDFFYCIWHRILHVRGLYKFIHKHHHHQAAPSRGNADAVNVHPIEFIVGEYCHLLAI-----FIIPCHAVVAAVFVVLGGILASLNHTRYDIAVPL----LFDTKAHDQHHVIPTVNYGQYTMLWDRVFGTYVPHP 226
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|1210518618|dbj|GAX22494.1| (hypothetical protein FisN_14Hh114 [Fistulifera solaris]) HSP 1 Score: 217.238 bits (552), Expect = 2.526e-65 Identity = 108/234 (46.15%), Postives = 150/234 (64.10%), Query Frame = 0 Query: 47 GLLVLAGLEILACLVFAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPY-PEEK 279 G+ V A E L + +G + IP+RGKHLD ARD+ +I F+K T F+Y +LS W++ E++ NT LAL LF+ +DF YTL H ALH +Y +IHKHHH QKAPSR DA+NVHP+E++ GEYNHL A++ F++PVH +T++ F+ +GG LA+LNHTR DI + +Y + HDVHH P+SNYGQY M WD +FG+F+ Y P+++ Sbjct: 63 GISVTAAFEGLDHIAKNWGVWWKSKQIPVRGKHLDYFTARDVIYIGFSKANTAPFTY-----FYLSFAARRCPWKLTEVSATNTLLALIALFIAFDFVYTLLHWALHVPRIYGYIHKHHHHQKAPSRAAVDAINVHPIEYILGEYNHLLALWFCQSFVVPVHGITSVVFLGIGGMLAALNHTRHDIVISFMGVTIYDSKVHDVHHRIPQSNYGQYTMFWDKVFGTFRDYNPKDR 291
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|1210530658|dbj|GAX10609.1| (hypothetical protein FisN_14Lh114 [Fistulifera solaris]) HSP 1 Score: 208.764 bits (530), Expect = 1.238e-62 Identity = 105/234 (44.87%), Postives = 148/234 (63.25%), Query Frame = 0 Query: 47 GLLVLAGLEILACLVFAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPY-PEEK 279 G+ V A E L + +G + IP+RGKHLD A D+ +I F+K T F+Y +LS W++ +++ NT +AL LF+ +DF YTL H ALH +Y +IHKHHH QKAPSR DA+NVHP+E++ GEYNHL A++ F++PVH +T++ F+ +GG LA+LNHTR DI + +Y + HDVHH P+SNYGQY M WD +FG+F+ Y P ++ Sbjct: 10 GISVTAAFEGLDHIAKHWGVWWKSKQIPVRGKHLDYFTAHDVIYIGFSKANTAPFTY-----FYLSFAAHRCPWKLTDVSATNTLIALIALFIAFDFVYTLLHWALHVPRIYGYIHKHHHHQKAPSRAAVDAINVHPIEYILGEYNHLLALWFCHSFVVPVHGITSVVFLGIGGMLAALNHTRHDIVISFMGVTIYDSKGHDVHHRIPQSNYGQYTMFWDKVFGTFRDYNPNDR 238
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|1072230655|gb|OEU15388.1| (hypothetical protein FRACYDRAFT_218274 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 208.764 bits (530), Expect = 1.504e-62 Identity = 115/238 (48.32%), Postives = 150/238 (63.03%), Query Frame = 0 Query: 49 LVLAGLEILACLVFAFGR-LRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMT--WQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFL-LPVHALTALAFIVLGGFLASLNHTRFDIKTP--GVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPY-PEEK 279 L++ LE+L L G + IP+RGKHLD L ++DL FI +K T F Y LLR+ + + W E T Q L LP+LF+VYDF YT+ H LH +A+Y IHKHHH QKAPSR DAVNVHPVEF GEYNHL I+L R L + +H L+ L F+ +GG LA NHTRFDI G+++ ++ + HDVHH P+SNYGQY M WD++FGS++PY P ++ Sbjct: 41 LIMLALELLKFLCVLSGESIGSKQKIPVRGKHLDDLSSKDLLFIGISKAQTGPFLYILLRYCFQETN---IQWTFNEDTSILQTVLLPLPVLFIVYDFFYTILHWFLHIKAIYPVIHKHHHHQKAPSRATDDAVNVHPVEFTLGEYNHLWTIFLFCRILNMRMHILSVLLFLAIGGVLAGWNHTRFDITFSIFGIVT-IFDSKAHDVHHRIPQSNYGQYTMFWDNVFGSYRPYDPTDR 274
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|219121861|ref|XP_002181276.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407262|gb|EEC47199.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 203.756 bits (517), Expect = 1.010e-60 Identity = 107/230 (46.52%), Postives = 142/230 (61.74%), Query Frame = 0 Query: 44 IAWGLLVLAGLEILACLVFAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSKGPALVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFK 273 + + +L+L E+L G R IP+RGKHLD L +D FI +K AT F Y LRF + V W + + + NT L LF+VYDF YT+ H ALH +A+Y +IHKHHH QKAPSR N DAVNVHPVEF GEYNHL ++L +R + +H L +L F+ +GGFLA +NHTR+D+ ++ + HDVHH P+SNYGQY M WD +F S++ Sbjct: 63 VLFAVLILLSFELLDFFSKHSGSWFRSKLIPVRGKHLDELTVKDQLFIGISKAATAPFVYFYLRFAYFEPN---VVWDLANLRFANTVAPLLALFIVYDFFYTILHWALHIKAIYGYIHKHHHHQKAPSRANVDAVNVHPVEFFLGEYNHLWTLFLCTR-VAQIHILGSLLFLAIGGFLAGINHTRYDMVVSFWGVRIFDSKAHDVHHRIPQSNYGQYTMFWDWVFQSYR 288
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|397640865|gb|EJK74359.1| (hypothetical protein THAOC_03966, partial [Thalassiosira oceanica]) HSP 1 Score: 200.675 bits (509), Expect = 3.007e-58 Identity = 114/272 (41.91%), Postives = 152/272 (55.88%), Query Frame = 0 Query: 54 LEILACLVFAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSK----------GPALVA----------------------------WRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFL-------LPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPY-PEEK 279 LE+++ +V+ R +IP+RGKHLD +D F+ FNK T LF Y +LW + G L++ W ++E++ NT +P+LFVVYDF YTL H ALH +A+Y +HKHHH QKAPSR N DAVNVHP+EF GE+NHL A++LV R + + V L AL FI LGG LA LNHTR D ++ ++HDVHH P+SNYGQY +LWD IFG+F+ Y P ++ Sbjct: 104 LELVSNIVYYVPRFFSAKTIPVRGKHLDEFSFKDKAFVTFNKCLTGLFVYAYFGYLWSVRKMPGDDEHESGDELLSLQHNHTHVHDHDHTFGNHDHCCGGGKGIWALDELSLANTVFPVPMLFVVYDFFYTLLHWALHVKAVYAFVHKHHHHQKAPSRANIDAVNVHPLEFALGEFNHLLALHLVGRGMPLICYHGMDVSWLGALLFISLGGILAGLNHTRHDAVARVGKYTIFDSKHHDVHHRIPQSNYGQYTVLWDRIFGTFRDYNPNDR 375
BLAST of EWM22932.1 vs. NCBI_GenBank
Match: gi|397594454|gb|EJK56240.1| (hypothetical protein THAOC_23917 [Thalassiosira oceanica]) HSP 1 Score: 196.823 bits (499), Expect = 3.255e-57 Identity = 112/272 (41.18%), Postives = 151/272 (55.51%), Query Frame = 0 Query: 54 LEILACLVFAFGRLRRVPSIPMRGKHLDTLDARDLGFIAFNKLATTLFSYHLLRFLWLSK----------GPALVA----------------------------WRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFL-------LPVHALTALAFIVLGGFLASLNHTRFDIKTPGVLSPVYQVRYHDVHHWFPESNYGQYLMLWDHIFGSFKPY-PEEK 279 LE+++ +V+ R +IP+RGKHLD +D F+ FNK T LF Y +LW + G L++ W ++E++ NT +P+LFVVYDF YTL H ALH +A+Y +HKHHH QKAPSR N DAVNVHP+EF GE+NH+ A++LV + + V L AL FI LGG LA LNHTR D ++ ++HDVHH P+SNYGQY +LWD IFG+F+ Y P ++ Sbjct: 60 LELVSNIVYYVPRFFSAKTIPVRGKHLDEFSFKDKAFVTFNKCLTGLFVYAYFGYLWSVRKMPGDDEHEAGDELLSLQNNHTHVHDHDHTFGNHDHCCGGGKGIWALDELSLANTVFPVPMLFVVYDFFYTLLHWALHVKAVYAFVHKHHHHQKAPSRANIDAVNVHPLEFALGEFNHVLALHLVVGGMPLICYHGMDVSWLGALLFISLGGILAGLNHTRHDAVARVGKYTIFDSKHHDVHHRIPQSNYGQYTVLWDRIFGTFRDYNPNDR 331 The following BLAST results are available for this feature:
BLAST of EWM22932.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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