EWM22938.1, cds7735 (CDS) Nannochloropsis gaditana

Overview
NameEWM22938.1
Unique Namecds7735
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:282840..284012 -
Alignment locationCM002473.1:282757..282762 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22938.1
Product3-isopropylmalate dehydrogenase
Orig transcript idgnl|cribi|Naga_101273g1.10778.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:282840..284012 -
CM002473.1supercontigCM002473.1:282757..282762 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0009098leucine biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0000287magnesium ion binding
GO:0051287NAD binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:00038623-isopropylmalate dehydrogenase activity
Vocabulary: INTERPRO
TermDefinition
IPR019818IsoCit/isopropylmalate_DH_CS
IPR001804Isocitrate/isopropylmalate_DH
IPR024084IsoPropMal-DH-like_dom
IPR004429Isopropylmalate_DH
Homology
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|585103660|gb|EWM22938.1| (3-isopropylmalate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 804.283 bits (2076), Expect = 0.000e+0
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0
Query:    1 MTNAEARRPLHSSLLSLLLLLPSSFLTARAFLHPSFPSLSSTRMQTPTGRRHRTEGVRMAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVERT 392
            MTNAEARRPLHSSLLSLLLLLPSSFLTARAFLHPSFPSLSSTRMQTPTGRRHRTEGVRMAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVERT
Sbjct:    1 MTNAEARRPLHSSLLSLLLLLPSSFLTARAFLHPSFPSLSSTRMQTPTGRRHRTEGVRMAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVERT 392          
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|551651878|ref|XP_005828719.1| (hypothetical protein GUITHDRAFT_158188 [Guillardia theta CCMP2712] >gi|428172833|gb|EKX41739.1| hypothetical protein GUITHDRAFT_158188 [Guillardia theta CCMP2712])

HSP 1 Score: 520.776 bits (1340), Expect = 0.000e+0
Identity = 256/334 (76.65%), Postives = 286/334 (85.63%), Query Frame = 0
Query:   59 MAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVERT 392
            MAV  K  Y VT LPGDGIGPEIM+ATV V + VAAK  FK +F++ALIGGAALDA +DPFPD +L+  +SSDSVLLA IGG KWD NPR+KRPETGLLKMRK+LGLFANLRPA VLPQL  ASTLKPEVVSGVDIMVVRELTGDVYFG PKGI T  DGER G+NNM YKESE++RIA+VA+ +A KRGK++CSVDKANVLDVSQLWR+VV E   + +PDV L HMYVDNAAMQLIRNPKQFD +V GN+FGDILSDEASMLVGSLGMLPSAS+GDP GPGVFEP HGSAPDIAG DKANPLA ILSAAMM RYDL +P+AA+A+E AV + 
Sbjct:    1 MAVKKKDSYFVTTLPGDGIGPEIMSATVKVCQAVAAKQGFKIEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPKGITT-KDGERFGYNNMCYKESEVKRIAKVAFDIARKRGKRVCSVDKANVLDVSQLWRDVVIETH-KDYPDVELSHMYVDNAAMQLIRNPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVFEPIHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPEAAQAIEDAVNKV 332          
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|1210527135|dbj|GAX14108.1| (3-isopropylmalate dehydrogenase [Fistulifera solaris])

HSP 1 Score: 514.227 bits (1323), Expect = 1.770e-179
Identity = 257/366 (70.22%), Postives = 294/366 (80.33%), Query Frame = 0
Query:   25 FLTARAFLHPSFPSLSSTRMQTPTGRRHRTEGVRMAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVE 390
            FLTA     P    +  +  Q+ + +         AV  K  YAVTLLPGDGIGPEI  AT  V++ +A + +F+ ++++ALIGGAA+DA +DPFP  SL+ C +SDSVLLACIGGYKWDKNPRE RPETGLLKMRK +GLFANLRPAKVLPQL+ ASTLK E+V GVD+MVVRELTGDVYFGTPKGI    +G+R G+NNMIY ESEI RIA+VA  VA KRG KLCSVDKANVLDVSQLWR+VVT+   +  PDV L HMYVDNAAMQLIR PKQFDTIVCGN+FGDILSDEASMLVGSLGMLPSAS+G+  GPGVFEPCHGSAPDIAG+DKANPLAMILSAAMML+YDL +P+ A  LE AVE
Sbjct:    9 FLTASLLASPGAAFVVPSSKQSSSLK---------AVAKKDSYAVTLLPGDGIGPEITAATKQVVQALATRCNFRIEWKEALIGGAAIDAKNDPFPQESLEQCLASDSVLLACIGGYKWDKNPRELRPETGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREIVEGVDVMVVRELTGDVYFGTPKGIDI-VNGQRVGYNNMIYSESEIDRIARVAGDVASKRGGKLCSVDKANVLDVSQLWRDVVTDVITKDFPDVQLSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLQYDLDRPEEAALLEKAVE 363          
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|1072230116|gb|OEU14850.1| (3-isopropylmalate dehydrogenase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 502.286 bits (1292), Expect = 1.183e-174
Identity = 247/343 (72.01%), Postives = 278/343 (81.05%), Query Frame = 0
Query:   48 TGRRHRTEGVRMAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVE 390
            T  R  T     AV  K  Y++TLLPGDGIGPEI  AT   L  +  K+ F  + ++ALIGGAA+DA++DPFP+ SLQ C SSDSVLLACIGGYKWD NPRE RPE+GLLKMRK +GLFANLRPAKVLPQL+ ASTLK E++ GVDIM VRELTGDVYFGTPKGI    DG+R G+NNMIY E EI RIA+VA  +A KRG KLCS+DKANVLDVSQLWREVVT+   +  P V L HMYVDN AMQLIR PKQFD IVCGN+FGDILSDEASMLVGSLGMLPSAS+G+  GPGVFEPCHGSAPDIAG+DKANPLAMILSAAMML+YDL +P+ A+ LE AVE
Sbjct:   33 TLSRSTTPSALNAVSKKDSYSITLLPGDGIGPEITAATKVALTALCEKSGFTLELKEALIGGAAIDAVNDPFPEESLQQCLSSDSVLLACIGGYKWDNNPRELRPESGLLKMRKEMGLFANLRPAKVLPQLMDASTLKREIIEGVDIMCVRELTGDVYFGTPKGIDV-IDGQRVGYNNMIYSEMEIDRIARVAGDIAAKRGGKLCSIDKANVLDVSQLWREVVTDVITKDFPSVELSHMYVDNCAMQLIRYPKQFDVIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGDDKANPLAMILSAAMMLKYDLDRPEEAKMLEDAVE 373          
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|219120381|ref|XP_002180930.1| (3-isopropylmalate dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407646|gb|EEC47582.1| 3-isopropylmalate dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 494.582 bits (1272), Expect = 1.250e-171
Identity = 257/341 (75.37%), Postives = 281/341 (82.40%), Query Frame = 0
Query:   50 RRHRTEGVRMAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVE 390
            R  R   V+ AV  K  Y +TLLPGDGIGPEI  +T  VL  +  K  F    + ALIGGAA+DA++DPFP  SL+ CQ+SDSVLLACIGGYKWD NPRE RPE+GLLKMRK +GLFANLRPAKVLPQL+ ASTLK EVV GVD+MVVRELTGDVYFGTPKGI T  +GER G+NNMIY ESEI RIA+VA  VA KRGKKLCSVDKANVLDVSQLWREVVT+   +  PDV L HMYVDNAAMQLIR PKQFDTIVCGN+FGDILSDEASMLVGSLGMLPSAS+G+  GPGVFEPCHGSAPDIAGEDKANPLAMILSAAMML+YDL +P  A  LE AVE
Sbjct:   30 RFARHPSVKDAVSKKDSYDITLLPGDGIGPEITESTKKVLTALCEKCGFDMNLKVALIGGAAIDAVNDPFPQESLEQCQASDSVLLACIGGYKWDSNPRELRPESGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIET-INGERVGYNNMIYSESEIDRIARVAGDVASKRGKKLCSVDKANVLDVSQLWREVVTDVITKDFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLKYDLDRPDEALLLENAVE 368          
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|1210529329|dbj|GAX11963.1| (3-isopropylmalate dehydrogenase [Fistulifera solaris])

HSP 1 Score: 493.041 bits (1268), Expect = 3.883e-171
Identity = 259/367 (70.57%), Postives = 294/367 (80.11%), Query Frame = 0
Query:   24 SFLTARAFLHPSFPSLSSTRMQTPTGRRHRTEGVRMAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVE 390
            +FLTA     P    + S +      R      +  AV  K  YAVTLLPGDGIGPEI  AT  VL+ +A + +F+ ++++ALIGGAA+DA +DPFP  SL+ C +SDSVLLACIGGYKWDKNPRE RPETGLLKMRK +GLFANLRPAKVLPQL+ ASTLK EVV GVD+MVVRELTGDVYFGTPKGI    +G+R G+NNMIY ESEI RIA+VA  VA KRG KLCSVDKANVLDVSQLWR+VVT+   +  P+V L HMYVDNAAMQLIR PKQFDTIVCGN+FGDILSDEASMLVGSLGMLPSAS+G+  GPGVFEPCHGSAPDIAG+DKANPLAMILSAAMML+YDL +P+ A  LE AVE
Sbjct:    8 AFLTASLLASPGAAFVPSVQ------RSSSASSLLGAVAKKDSYAVTLLPGDGIGPEITAATKQVLQALATRCNFRIEWKEALIGGAAIDAKNDPFPQESLEQCLASDSVLLACIGGYKWDKNPRELRPETGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDM-VNGQRVGYNNMIYSESEIDRIARVAGDVASKRGGKLCSVDKANVLDVSQLWRDVVTDVITKDFPEVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLQYDLDRPEEAALLEKAVE 366          
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|224001930|ref|XP_002290637.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974059|gb|EED92389.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 484.182 bits (1245), Expect = 1.220e-167
Identity = 256/364 (70.33%), Postives = 288/364 (79.12%), Query Frame = 0
Query:   27 TARAFLHPSFPSLSSTRMQTPTGRRHRTEGVRMAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVE 390
            T  AF  PS  + SST +  P+           AV  K  Y +TLLPGDGIGPEIMTAT  VL  + ++  F  +  +ALIGGAA+DA++DPFPD SLQ C  SDSVLL+CIGGYKWD NPRE RPE+GLLKMRK++GLFANLRPAKVL QL+ ASTLK EVV GVD+MVVRELTGDVYFGTPKGI    DG+R G+NNMIY E EI RIA+VA  VA KRG KLCSVDKANVLDVSQLWR+V T+   +  PDV L HMYVDNAAMQLIR PKQFDT+V GN+FGDILSDEASMLVGSLGMLPSAS+G+  GPGVFEPCHGSAPDIAGEDKANPLA+ILSAAMMLRYDL + + A+ LE AVE
Sbjct:   13 TTSAFTTPSRYA-SSTLLSPPSAGTTTAVAPLAAVSKKDTYQITLLPGDGIGPEIMTATKQVLASLQSRCGFTLEMTEALIGGAAIDAVNDPFPDESLQQCLKSDSVLLSCIGGYKWDSNPRELRPESGLLKMRKSMGLFANLRPAKVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDV-VDGKRIGYNNMIYSEDEIVRIARVAGDVASKRGGKLCSVDKANVLDVSQLWRDVTTDIITKEFPDVELSHMYVDNAAMQLIRWPKQFDTMVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGEDKANPLALILSAAMMLRYDLDRAEEADILERAVE 373          
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|397642618|gb|EJK75346.1| (hypothetical protein THAOC_02929 [Thalassiosira oceanica])

HSP 1 Score: 482.256 bits (1240), Expect = 6.885e-167
Identity = 246/331 (74.32%), Postives = 279/331 (84.29%), Query Frame = 0
Query:   60 AVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVE 390
            AV  K  Y +TLLPGDGIGPEIM +   VL  +  +  F+   ++ALIGGAA+DA++DPFPD +L+ACQS+DSVLL+CIGGYKWD NPRE RPETGLLKMRK++GLFANLRPAKVL QL+ ASTLK EVV GVD+MVVRELTGDVYFG PKGI T +DG+R G+NNMIY E EI RIA+VA  VA KR  KLCSVDKANVLDVSQLWR+VVT+      PDV L HMYVDNAAMQLIR PKQFDT+V GN+FGDILSDEASMLVGSLGMLPSAS+G+  GPGVFEPCHGSAPDIAGEDKANPLA+ILSAAMMLRYDL++ + A+ LEAAVE
Sbjct:   34 AVSRKDSYDITLLPGDGIGPEIMESAKSVLSALCDRCGFELNLREALIGGAAIDAVNDPFPDATLEACQSADSVLLSCIGGYKWDGNPRELRPETGLLKMRKSMGLFANLRPAKVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGAPKGIDTDADGKRVGYNNMIYSEGEIERIARVAGDVASKRNGKLCSVDKANVLDVSQLWRDVVTDVITDEFPDVDLSHMYVDNAAMQLIRWPKQFDTMVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGEDKANPLALILSAAMMLRYDLARGEEADILEAAVE 363          
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|298712794|emb|CBJ48759.1| (3-isopropylmalate dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 479.174 bits (1232), Expect = 1.828e-165
Identity = 238/332 (71.69%), Postives = 271/332 (81.63%), Query Frame = 0
Query:   59 MAVGAKGEYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAVE 390
            M   AK  Y V LLPGDGIGPEI  ATV  LE +  ++ FK  F++ALIGGAA+DA   P+PD++L   ++SDS+LLA IGG KWD NPRE RPETGLL MR  LGLFANLRPAKV+ +LV AS+LKPE+V GVDIMVVRELTGDVYFGTPKGI     GER G+NNMIY E E+ RIA+VAY VA KRGK+LCSVDKANVLDVSQLWR+VV +     +P+V L H YVDNAAMQLIR PKQFD +V GN+FGDILSDEASMLVGSLGMLPSAS+G+P GPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL +P  A+ +EAAV+
Sbjct:   44 MVTEAKDSYDVMLLPGDGIGPEITAATVNALEPL--QSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMS-EDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVD 372          
BLAST of EWM22938.1 vs. NCBI_GenBank
Match: gi|1054578820|ref|WP_066347637.1| (3-isopropylmalate dehydrogenase [Geminocystis sp. NIES-3708] >gi|770469335|dbj|BAQ62233.1| 3-isopropylmalate dehydrogenase [Geminocystis sp. NIES-3708])

HSP 1 Score: 462.611 bits (1189), Expect = 7.368e-160
Identity = 225/324 (69.44%), Postives = 264/324 (81.48%), Query Frame = 0
Query:   66 EYAVTLLPGDGIGPEIMTATVGVLEVVAAKASFKFKFQDALIGGAALDAMDDPFPDTSLQACQSSDSVLLACIGGYKWDKNPREKRPETGLLKMRKTLGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYFGTPKGIRTGSDGEREGFNNMIYKESEIRRIAQVAYGVAEKRGKKLCSVDKANVLDVSQLWREVVTEEGLRHHPDVALEHMYVDNAAMQLIRNPKQFDTIVCGNLFGDILSDEASMLVGSLGMLPSASLGDPRGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSQPQAAEALEAAV 389
            +Y++TLLPGDGIGPEIM  TV VL+VVA + + +F+FQ+ALIGGAA+DA  +P P  +++ C+ SDSVLLA IGGYKWD  PRE+RPETGLL +R  LGLFANLRPA +LPQL+ AS+LK EVV GVDIMVVRELTG +YFG PKGI T   GE+ G N M+Y ESEI RIA+VA+  A+KR K+LCSVDKANVLDVSQLWR+ V       +PDV L HMYVDNAAMQL+RNPKQFDTIV GNLFGDILSD A+ML GS+GMLPSASLG  R PG+FEP HGSAPDIAG+DKANPLA +LSAAMMLRY L++P  A  +E+AV
Sbjct:    4 KYSITLLPGDGIGPEIMAVTVEVLKVVAKQCNIEFQFQEALIGGAAIDATGNPLPPETIEICKKSDSVLLAAIGGYKWDNLPREQRPETGLLGIRAALGLFANLRPATILPQLIDASSLKREVVEGVDIMVVRELTGGIYFGKPKGIFTSETGEKRGINTMVYSESEIDRIARVAFETAQKRQKRLCSVDKANVLDVSQLWRDRVIAIS-ADYPDVELTHMYVDNAAMQLVRNPKQFDTIVTGNLFGDILSDAAAMLTGSIGMLPSASLGSDR-PGLFEPVHGSAPDIAGQDKANPLAQVLSAAMMLRYGLNEPIPASKIESAV 325          
The following BLAST results are available for this feature:
BLAST of EWM22938.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103660|gb|EWM22938.1|0.000e+0100.003-isopropylmalate dehydrogenase [Nannochloropsis g... [more]
gi|551651878|ref|XP_005828719.1|0.000e+076.65hypothetical protein GUITHDRAFT_158188 [Guillardia... [more]
gi|1210527135|dbj|GAX14108.1|1.770e-17970.223-isopropylmalate dehydrogenase [Fistulifera solar... [more]
gi|1072230116|gb|OEU14850.1|1.183e-17472.013-isopropylmalate dehydrogenase [Fragilariopsis cy... [more]
gi|219120381|ref|XP_002180930.1|1.250e-17175.373-isopropylmalate dehydrogenase [Phaeodactylum tri... [more]
gi|1210529329|dbj|GAX11963.1|3.883e-17170.573-isopropylmalate dehydrogenase [Fistulifera solar... [more]
gi|224001930|ref|XP_002290637.1|1.220e-16770.33predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397642618|gb|EJK75346.1|6.885e-16774.32hypothetical protein THAOC_02929 [Thalassiosira oc... [more]
gi|298712794|emb|CBJ48759.1|1.828e-16571.693-isopropylmalate dehydrogenase [Ectocarpus silicu... [more]
gi|1054578820|ref|WP_066347637.1|7.368e-16069.443-isopropylmalate dehydrogenase [Geminocystis sp. ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7756rna7756Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications