EWM22957.1, cds7706 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|553181745|ref|XP_005853615.1| (glutaredoxin-like protein [Nannochloropsis gaditana CCMP526] >gi|422295442|gb|EKU22741.1| glutaredoxin-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 329.717 bits (844), Expect = 8.109e-114 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 Query: 1 MLRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQRSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKKQQKEGESAP 158 MLRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQRSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKKQQKEGESAP Sbjct: 39 MLRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQRSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKKQQKEGESAP 196
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|585103690|gb|EWM22957.1| (glutaredoxin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 327.02 bits (837), Expect = 2.083e-113 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 Query: 1 MLRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQRSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKKQQKEGESAP 158 MLRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQRSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKKQQKEGESAP Sbjct: 1 MLRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQRSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKKQQKEGESAP 158
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|1214687285|gb|OWZ03629.1| (Grx4 family monothiol glutaredoxin [Phytophthora megakarya]) HSP 1 Score: 175.637 bits (444), Expect = 1.897e-53 Identity = 86/149 (57.72%), Postives = 109/149 (73.15%), Query Frame = 0 Query: 2 LRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQ-RSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKK 149 LR++PA AA R F++ +DSH DF+PQ ++ + D +KMI VK + +MLYMKGTP+ PQCGFS Q VRILHA GV FDSVNVLD+P IREGVK+YS+WPT+PQL+V GEFVGGCDI+T + +SGELA++L E K Sbjct: 23 LRVAPA--FVAAQPRFFSAK---SGDDSHSDFQPQYHAAKSTEKDEILKMIESHVKTYPVMLYMKGTPSAPQCGFSMQVVRILHAQGVSFDSVNVLDHPEIREGVKEYSQWPTIPQLYVNGEFVGGCDIITDMSKSGELAELLAEFKKN 166
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|970661170|gb|KUF98661.1| (cGMP-gated cation channel alpha-1 [Phytophthora nicotianae]) HSP 1 Score: 172.94 bits (437), Expect = 1.230e-52 Identity = 83/150 (55.33%), Postives = 108/150 (72.00%), Query Frame = 0 Query: 1 MLRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQ-RSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKK 149 M R++ ++A R F++ +DSH DF+PQ ++ + D +KMI VK + +MLYMKGTP+ PQCGFS Q VRILHA GV FDSVNVLD+P IREGVK+YS+WPT+PQL+V GEFVGGCDI+T + +SGELA++L E K Sbjct: 1 MQRVAAPVFVSAHQSRFFSAK---SGDDSHSDFQPQYHAAKSTEKDEILKMIESHVKTYPVMLYMKGTPSAPQCGFSMQVVRILHAQGVSFDSVNVLDHPEIREGVKEYSQWPTIPQLYVNGEFVGGCDIITDMNKSGELAELLAEFKKN 147
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|301121310|ref|XP_002908382.1| (monothiol glutaredoxin-5, mitochondrial precursor [Phytophthora infestans T30-4] >gi|262103413|gb|EEY61465.1| monothiol glutaredoxin-5, mitochondrial precursor [Phytophthora infestans T30-4]) HSP 1 Score: 173.711 bits (439), Expect = 1.249e-52 Identity = 78/120 (65.00%), Postives = 97/120 (80.83%), Query Frame = 0 Query: 27 EDSHDDFKPQ-RSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEE 145 +DSH DF+PQ ++ + D IKMI VK + +MLYMKGTP+ PQCGFS Q VRILHA GV FDSVNVLD+P IREGVK+YS+WPT+PQL+V GEFVGGCDI+T + +SGEL+++LEE Sbjct: 48 DDSHSDFQPQYHAAKSTEKDEIIKMIESHVKTYPVMLYMKGTPSAPQCGFSMQVVRILHAQGVSFDSVNVLDHPEIREGVKEYSQWPTIPQLYVNGEFVGGCDIITDMNKSGELSELLEE 167
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|970634694|gb|KUF79824.1| (Monothiol glutaredoxin-5 [Phytophthora nicotianae] >gi|970644549|gb|KUF85347.1| Monothiol glutaredoxin-5 [Phytophthora nicotianae]) HSP 1 Score: 172.94 bits (437), Expect = 2.576e-52 Identity = 83/150 (55.33%), Postives = 108/150 (72.00%), Query Frame = 0 Query: 1 MLRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQ-RSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKK 149 M R++ ++A R F++ +DSH DF+PQ ++ + D +KMI VK + +MLYMKGTP+ PQCGFS Q VRILHA GV FDSVNVLD+P IREGVK+YS+WPT+PQL+V GEFVGGCDI+T + +SGELA++L E K Sbjct: 23 MQRVAAPVFVSAHQSRFFSAK---SGDDSHSDFQPQYHAAKSTEKDEILKMIESHVKTYPVMLYMKGTPSAPQCGFSMQVVRILHAQGVSFDSVNVLDHPEIREGVKEYSQWPTIPQLYVNGEFVGGCDIITDMNKSGELAELLAEFKKN 169
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|675163739|ref|XP_008890754.1| (Grx4 family monothiol glutaredoxin [Phytophthora parasitica INRA-310] >gi|566033434|gb|ETI56345.1| Grx4 family monothiol glutaredoxin [Phytophthora parasitica P1569] >gi|567971105|gb|ETK96118.1| Grx4 family monothiol glutaredoxin [Phytophthora parasitica] >gi|567999456|gb|ETL49494.1| Grx4 family monothiol glutaredoxin [Phytophthora parasitica] >gi|568028630|gb|ETM02568.1| Grx4 family monothiol glutaredoxin [Phytophthora parasitica] >gi|568059221|gb|ETM55798.1| Grx4 family monothiol glutaredoxin [Phytophthora parasitica] >gi|568110104|gb|ETN24711.1| Grx4 family monothiol glutaredoxin [Phytophthora parasitica INRA-310] >gi|570337126|gb|ETO85074.1| Grx4 family monothiol glutaredoxin [Phytophthora parasitica P1976] >gi|570961147|gb|ETP26126.1| Grx4 family monothiol glutaredoxin [Phytophthora parasitica CJ01A1] >gi|570997820|gb|ETP54123.1| Grx4 family monothiol glutaredoxin [Phytophthora parasitica P10297]) HSP 1 Score: 172.94 bits (437), Expect = 2.834e-52 Identity = 83/150 (55.33%), Postives = 108/150 (72.00%), Query Frame = 0 Query: 1 MLRLSPASNLAAAARRSFASSPPPGNEDSHDDFKPQ-RSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKK 149 M R++ ++A R F++ +DSH DF+PQ ++ + D +KMI VK + +MLYMKGTP+ PQCGFS Q VRILHA GV FDSVNVLD+P IREGVK+YS+WPT+PQL+V GEFVGGCDI+T + +SGELA++L E K Sbjct: 25 MQRVAAPVFVSAHQSRFFSAK---SGDDSHSDFQPQYHAAKSTEKDEILKMIESHVKTYPVMLYMKGTPSAPQCGFSMQVVRILHAQGVSFDSVNVLDHPEIREGVKEYSQWPTIPQLYVNGEFVGGCDIITDMNKSGELAELLAEFKKN 171
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|695405104|ref|XP_009523710.1| (hypothetical protein PHYSODRAFT_285540 [Phytophthora sojae] >gi|348681177|gb|EGZ20993.1| hypothetical protein PHYSODRAFT_285540 [Phytophthora sojae]) HSP 1 Score: 172.17 bits (435), Expect = 6.014e-52 Identity = 83/142 (58.45%), Postives = 104/142 (73.24%), Query Frame = 0 Query: 8 SNLAAAARRSFASSPPPGNEDSHDDFKPQ-RSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAK 148 S L A++ S G++ SH DF+PQ ++ + D +KMI VK + IMLYMKGTP+ PQCGFS Q VRILHA GV FDSVNVLD+P IREGVK+YS+WPT+PQL+V GEFVGGCDI+T + +SGELA++L E K Sbjct: 30 SQLQLLAQQPRFFSAKSGDDGSHSDFQPQYHAAKSTEKDEILKMIESHVKTYPIMLYMKGTPSAPQCGFSMQVVRILHAQGVSFDSVNVLDHPEIREGVKEYSQWPTIPQLYVKGEFVGGCDIITDMSKSGELAELLAEFKK 171
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|953499051|emb|CEG39363.1| (grx4 family monothiol glutaredoxin [Plasmopara halstedii]) HSP 1 Score: 171.785 bits (434), Expect = 8.841e-52 Identity = 78/125 (62.40%), Postives = 98/125 (78.40%), Query Frame = 0 Query: 27 EDSHDDFKPQ-RSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKKQ 150 +DSH DFKPQ ++ ++ D +KMI + VK + IMLYMKGTP+ PQCGFS Q VR LHA GV FDSVNVLD+P IREGVKKYS+WPT+PQL+V GEFVGGCDI+ + +SGEL+++L KK+ Sbjct: 45 DDSHSDFKPQYHAAKSSETDEILKMIDDHVKTYPIMLYMKGTPSAPQCGFSMQVVRALHAQGVSFDSVNVLDHPEIREGVKKYSQWPTIPQLYVNGEFVGGCDIIMDMSKSGELSELLANFKKKE 169
BLAST of EWM22957.1 vs. NCBI_GenBank
Match: gi|673054743|ref|XP_008881332.1| (Grx4 family monothiol glutaredoxin [Aphanomyces invadans] >gi|574462864|gb|ETV90038.1| Grx4 family monothiol glutaredoxin [Aphanomyces invadans]) HSP 1 Score: 170.244 bits (430), Expect = 1.717e-51 Identity = 77/134 (57.46%), Postives = 102/134 (76.12%), Query Frame = 0 Query: 16 RSFASSPPPGNEDSHDDFKPQ-RSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAK 148 R+ A+S + SHDDFKP+ ++P +D D +K+I VK + +MLYMKG+P PQCGFS Q V+ILHA GV FDSVNVLD+ IREGVK+YS+WPT+PQLFV GEF+GGCDI+T + +SGEL ++L+ + K Sbjct: 13 RTVAASARCLSTASHDDFKPKYHAAPSSDKDDVLKLIESHVKTYPVMLYMKGSPTSPQCGFSRQVVQILHAQGVSFDSVNVLDHEEIREGVKEYSQWPTIPQLFVKGEFIGGCDIVTDMHKSGELEELLKTAVK 146 The following BLAST results are available for this feature:
BLAST of EWM22957.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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