EWM22972.1, cds7701 (CDS) Nannochloropsis gaditana

Overview
NameEWM22972.1
Unique Namecds7701
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:168848..168946 +
Alignment locationCM002473.1:169006..169063 +
Alignment locationCM002473.1:169132..169280 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22972.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101702g1.5186.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:168848..168946 +
CM002473.1supercontigCM002473.1:169006..169063 +
CM002473.1supercontigCM002473.1:169132..169280 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22972.1 vs. NCBI_GenBank
Match: gi|585103707|gb|EWM22972.1| (hypothetical protein Naga_101702g1 [Nannochloropsis gaditana])

HSP 1 Score: 204.527 bits (519), Expect = 1.078e-66
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 
Query:    1 MGREHSEQLRQALLAAGYELAWDLTGVGKTVTEGCTLRRGGRVSWREGGGGGVVDRQLVCVRICVLNHERSLQEGHGNRTRWYSGACQRKLARMRPSFLSP 101
            MGREHSEQLRQALLAAGYELAWDLTGVGKTVTEGCTLRRGGRVSWREGGGGGVVDRQLVCVRICVLNHERSLQEGHGNRTRWYSGACQRKLARMRPSFLSP
Sbjct:    1 MGREHSEQLRQALLAAGYELAWDLTGVGKTVTEGCTLRRGGRVSWREGGGGGVVDRQLVCVRICVLNHERSLQEGHGNRTRWYSGACQRKLARMRPSFLSP 101
The following BLAST results are available for this feature:
BLAST of EWM22972.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103707|gb|EWM22972.1|1.078e-66100.00hypothetical protein Naga_101702g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7722rna7722Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications