EWM22980.1, cds7692 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|585103720|gb|EWM22980.1| (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 618.616 bits (1594), Expect = 0.000e+0 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
Query: 1 MSSFRNDKKSLPAILGDTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRKREHVSDAEDGRKEASEEEEARRKRRKQDERKWKKKEKRREEERVEGAEKSKREKKERKARGKEGKRESRKEKKRRKEAREREE 309
MSSFRNDKKSLPAILGDTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRKREHVSDAEDGRKEASEEEEARRKRRKQDERKWKKKEKRREEERVEGAEKSKREKKERKARGKEGKRESRKEKKRRKEAREREE
Sbjct: 1 MSSFRNDKKSLPAILGDTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRKREHVSDAEDGRKEASEEEEARRKRRKQDERKWKKKEKRREEERVEGAEKSKREKKERKARGKEGKRESRKEKKRRKEAREREE 309
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|553185509|ref|XP_005854258.1| (cyclophilin, partial [Nannochloropsis gaditana CCMP526] >gi|422294803|gb|EKU22103.1| cyclophilin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 215.312 bits (547), Expect = 1.259e-67 Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0
Query: 1 MSSFRNDKKSLPAILGDTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYG 102
MSSFRNDKKSLPAILGDTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFS KKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYG
Sbjct: 1 MSSFRNDKKSLPAILGDTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSGKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYG 102
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|403343980|gb|EJY71326.1| (Peptidyl-prolyl cis-trans isomerase (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 213.001 bits (541), Expect = 3.349e-64 Identity = 114/279 (40.86%), Postives = 177/279 (63.44%), Query Frame = 0
Query: 20 VYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRKREHVSDAEDGRKEASEEEEARRKRRKQDERKWKKKEKRREEERVEGAEKSKREKKERKARGKEGKRESRKEK 298
V+F++ +GG P+G++V L+ +VTP+T ENFR LCTGE G + K L +K SVFHR+I FM QGGD+TA NGTGGES+YG TFPDENF+++H + GLLSMANAG +TNGSQFF+T+ TPHL+GKH VFG+V + + I +++ER+ D P E+VV+ CGE ++ + E++ + ++ K+ E+ ++++S +E R+ +D+ K +K E+ R E+ + +K ++ K+ + + K +RES+ +K
Sbjct: 14 VFFEIEIGGKPQGKIVMELFKNVTPRTAENFRQLCTGESGKRSSNGKVLSFKNSVFHRVIREFMMQGGDFTAFNGTGGESIYGRTFPDENFKLKHTQKGLLSMANAGKNTNGSQFFITYAVTPHLNGKHCVFGKV----------------ESGYDICQKIERLRCDRNDKP--QEKVVIVNCGEVKK----QVEQKPQVTEKADVKQAQKHGKEEEKQQSSHQE--RKAVNPEDKEKARKVERSRSREKNDTTDKVRQHNKDSEDQQKHHRRESQHDK 268
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|661892522|emb|CDP03680.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 223.016 bits (567), Expect = 4.036e-64 Identity = 113/237 (47.68%), Postives = 151/237 (63.71%), Query Frame = 0
Query: 17 DTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRKREHVSDAEDGRKEASEEEEARRKRRKQ 253
+ V+FD+S+ G P R+ L+ V P+T ENFRALCTGEKG+ + K LHYKGS FHRII GFMAQGGD++ GNGTGGES+YG FPDENF+++H AGLLSMAN+GP+TNGSQFF+TF+R PHLDGKHVVFG+V + ++++R+ERV T + V + GE + + G+K+K K D+ DGR + + + E RKR+K+
Sbjct: 6 NPLVFFDVSIDGSPAERITIELFADVVPKTAENFRALCTGEKGIGSSTGKPLHYKGSSFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFPDENFKLDHSEAGLLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVEGM----------------EVIRRVERVGTADGKPSGV---VKIVDSGETSQSSTHDAFGTQTGRKKKSAKPVSPDDSSDGRVKGNRKSEDWRKRKKR 223
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|72011327|gb|AAZ66132.1| (cyclophilin [Sterkiella histriomuscorum] >gi|72011330|gb|AAZ66134.1| cyclophilin [Sterkiella histriomuscorum]) HSP 1 Score: 211.846 bits (538), Expect = 1.065e-63 Identity = 113/279 (40.50%), Postives = 177/279 (63.44%), Query Frame = 0
Query: 20 VYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRKREHVSDAEDGRKEASEEEEARRKRRKQDERKWKKKEKRREEERVEGAEKSKREKKERKARGKEGKRESRKEK 298
V+F++ +GG P+G++V L+ +VTP+T ENFR LCTGE G + K L +K SVFHR+I FM QGGD+TA NG+GGES+YG TFPDENF+++H + GLLSMANAG +TNGSQFF+T+ TPHL+GKH VFG+V + + I +++ER+ D P E+VV+ CGE ++ + E++ + ++ K+ E+ ++++S +E R+ +D+ K +K E+ R E+ + +K ++ K+ + + K +RES+ +K
Sbjct: 14 VFFEIEIGGKPQGKIVMELFKNVTPRTAENFRQLCTGESGKRSSNGKVLSFKNSVFHRVIREFMMQGGDFTAFNGSGGESIYGRTFPDENFKLKHTQKGLLSMANAGKNTNGSQFFITYAVTPHLNGKHCVFGKV----------------ESGYDICQKIERLRCDRNDKP--QEKVVIVNCGEVKK----QVEQKPQVTEKADVKQAQKHGKEEEKQQSSHQE--RKAVNPEDKEKARKVERSRSREKNDTTDKVRQHNKDSEDQQKHHRRESQHDK 268
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|72011321|gb|AAZ66128.1| (cyclophilin [Uroleptus sp. WJC-2003]) HSP 1 Score: 209.92 bits (533), Expect = 3.457e-63 Identity = 98/184 (53.26%), Postives = 127/184 (69.02%), Query Frame = 0
Query: 20 VYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCG 203
VYFD+ +GG GR+V L+ ++ P+T ENFR LCTG G + + KKLH+K S+FHR+IP FM QGGD+T NGTGGES+YG F DENF+++H + GLLSMANAG +TNGSQFF+TF TPHLDGKHVVFG V + F+I +++ER+ T D+P +ERVV+ CG
Sbjct: 12 VYFDIEIGGKSAGRIVMELFKNIVPRTAENFRLLCTGTSGKTSSNGKKLHFKNSIFHRVIPQFMMQGGDFTKFNGTGGESIYGTKFADENFKLKHTQRGLLSMANAGRNTNGSQFFITFTTTPHLDGKHVVFGRVEQ----------------GFEICQKIERLRTNSQDVP--SERVVIVDCG 177
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|673045941|ref|XP_008876931.1| (hypothetical protein H310_11878 [Aphanomyces invadans] >gi|574467593|gb|ETV94616.1| hypothetical protein H310_11878 [Aphanomyces invadans]) HSP 1 Score: 206.838 bits (525), Expect = 2.057e-62 Identity = 116/245 (47.35%), Postives = 152/245 (62.04%), Query Frame = 0
Query: 15 LGDTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRKREHVSDAEDGRKEASEEEEARRKRRKQDERKWK 259
+ D V+FD+ +GG GR+VF LYN TP+T ENFRALCTGEKG+ K +RK L YKGS+FHRII GFM QGGD++ NGTGGES+YG F DENF +H +AGLLSMANAG TNGSQFF+T T HL+GKHVVFGEV + G ++++ + V D PV + VV+ CGE++ E K++K+ + V +KEA+ ++E K +DE+K K
Sbjct: 1 MPDQQVFFDIEIGGKKSGRIVFRLYND-TPKTSENFRALCTGEKGVGKTTRKPLTYKGSIFHRIIDGFMCQGGDFSNRNGTGGESIYGAKFKDENFIHKHTKAGLLSMANAGRHTNGSQFFITLAATKHLNGKHVVFGEV----VSG------------MQVVRAMAAVPKGRNDKPV--KDVVIADCGEYDEAAAAPKAHEKSKDKKRKQTDDEVPAKAPAKKEAAGQDEKTNKGGDEDEKKVK 226
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|685295596|ref|XP_009138664.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP63 [Brassica rapa]) HSP 1 Score: 214.927 bits (546), Expect = 7.514e-62 Identity = 104/210 (49.52%), Postives = 139/210 (66.19%), Query Frame = 0
Query: 17 DTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRK 226
+ V+ D+S+GG P R+V L+ H+ P+T ENFRALCTGE GL K + K LH+KGS FHR+I GFMAQGGD++ GNGTGGES+YG FPDENF ++H G+LSMAN GP+TNGSQFF+ F+R PHLDGKHVVFG+V + + +++K++E V T+ T V + CGE + G + E+ +GK +K K
Sbjct: 8 NPTVFLDVSIGGDPLERIVIELFAHLVPKTAENFRALCTGEAGLGKTTSKPLHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFPDENFELDHEEGGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVKGM----------------EVVKKMELVGTSDGK---PTSNVKIIDCGEVSQLKGEDAAEKDKGKLKKSSK 198
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|923603298|ref|XP_013741818.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP63-like [Brassica napus] >gi|923603312|ref|XP_013741823.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP63-like [Brassica napus] >gi|674878306|emb|CDY53714.1| BnaAnng12550D [Brassica napus]) HSP 1 Score: 214.542 bits (545), Expect = 7.674e-62 Identity = 104/210 (49.52%), Postives = 139/210 (66.19%), Query Frame = 0
Query: 17 DTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRK 226
+ V+ D+S+GG P R+V L+ H+ P+T ENFRALCTGE GL K + K LH+KGS FHR+I GFMAQGGD++ GNGTGGES+YG FPDENF ++H G+LSMAN GP+TNGSQFF+ F+R PHLDGKHVVFG+V + + +++K++E V T+ T V + CGE + G + E+ +GK +K K
Sbjct: 8 NPTVFLDVSIGGDPLERIVIELFAHLVPKTAENFRALCTGEAGLGKTTSKPLHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFPDENFELDHEEGGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVKGM----------------EVVKKMELVGTSDGK---PTSNVKIIDCGEVSQLKGEDAAEKDKGKLKKSSK 198
BLAST of EWM22980.1 vs. NCBI_GenBank
Match: gi|764534318|ref|XP_011458604.1| (PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase CYP63 [Fragaria vesca subsp. vesca]) HSP 1 Score: 216.083 bits (549), Expect = 1.585e-61 Identity = 118/242 (48.76%), Postives = 153/242 (63.22%), Query Frame = 0
Query: 20 VYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGEVHREILPGQRAGHGPSPDLKFKILKRLERVETTGADLPVLTERVVVTGCGEWERGGGMEGEEEGEGKKRKKRKREHVSDAEDGRKEASEEEEARRKRRKQDERKWKKK 261
V+ D+S+ P R+V L+ V P+T ENFRALCTGEKG+ K + K LHYKGS FHRII GFMAQGGD++AGNGTGGES+YG F DE F+++H + GLLSMANAGP+TNGSQFF+ F TPHLDGKHVVFG+V + I ++K++E+ G D + V + CGE E E+ +GKKRK K +S +ED + EE +RK+ ++ RK KK
Sbjct: 9 VFLDVSINEAPTERIVIELFADVAPKTAENFRALCTGEKGIGKSTGKPLHYKGSQFHRIIKGFMAQGGDFSAGNGTGGESIYGGKFADEAFKLKHDKLGLLSMANAGPNTNGSQFFIIFNPTPHLDGKHVVFGKVTKGI----------------DVVKKMEKA---GTDSGKPLQPVKIVDCGEVENIKIPITTEKEKGKKRKSVK---ISSSED---RSDEEVRGKRKKSLKERRKRTKK 225 The following BLAST results are available for this feature:
BLAST of EWM22980.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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