EWM22991.1, cds7682 (CDS) Nannochloropsis gaditana

Overview
NameEWM22991.1
Unique Namecds7682
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:128961..129065 +
Alignment locationCM002473.1:129434..129619 +
Alignment locationCM002473.1:130002..130103 +
Alignment locationCM002473.1:130415..130547 +
Alignment locationCM002473.1:130696..130739 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22991.1
Producttranslation elongation factor
Orig transcript idgnl|cribi|Naga_101614g1.3625.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:128961..129065 +
CM002473.1supercontigCM002473.1:129434..129619 +
CM002473.1supercontigCM002473.1:130002..130103 +
CM002473.1supercontigCM002473.1:130415..130547 +
CM002473.1supercontigCM002473.1:130696..130739 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008135translation factor activity, RNA binding
GO:0000166nucleotide binding
GO:0005525GTP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel
IPR004161Transl_elong_EFTu/EF1A_2
IPR009022EFG_III-V
Homology
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|585103742|gb|EWM22991.1| (translation elongation factor [Nannochloropsis gaditana])

HSP 1 Score: 398.282 bits (1022), Expect = 1.181e-140
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGGQAVRRAPGTRWKRGR 189
            MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGGQAVRRAPGTRWKRGR
Sbjct:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGGQAVRRAPGTRWKRGR 189          
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|672824186|gb|KFH69079.1| (elongation factor G, mitochondrial [Mortierella verticillata NRRL 6337])

HSP 1 Score: 257.684 bits (657), Expect = 2.816e-79
Identity = 115/174 (66.09%), Postives = 144/174 (82.76%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGG 174
            +RVYQG ++RGG++ N++NDKK+KVPRLVRMH++ELE++D I  G++CAMFGVDCSS D+FTDG+++Y +TSMFVP PVISL++KPK      NFSKAL RF KEDPT +V  + +TKET+ISGMGELHLEIYVER++REYNVDC  G P V +RE I+  A FNY HKKQSGG
Sbjct:  277 LRVYQGMLRRGGFITNVKNDKKIKVPRLVRMHADELEDVDEIGPGEICAMFGVDCSSGDTFTDGSLQYTMTSMFVPNPVISLSLKPKGKES-PNFSKALNRFQKEDPTFKVHVDSETKETIISGMGELHLEIYVERMRREYNVDCVTGKPQVAFREAIQDSAKFNYTHKKQSGG 449          
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|751174051|gb|KIL60069.1| (hypothetical protein M378DRAFT_84328 [Amanita muscaria Koide BX008])

HSP 1 Score: 258.455 bits (659), Expect = 1.300e-78
Identity = 115/174 (66.09%), Postives = 146/174 (83.91%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGG 174
            MRVYQGT+K+GG ++N RN KKVKVPRLVRMHSNE+E++DS+  G++CAMFGV+C+S D+FTDG+    ++SMFVP PVISLA+K K      NFS+ALQRF KEDPT +V  ++ TKET+ISGMGELHLEIYVER+KREYNVDC+ G P VN+RET+ ++A+FN+ HKKQ+GG
Sbjct:  396 MRVYQGTLKKGGIIFNARNGKKVKVPRLVRMHSNEMEDVDSVGPGEICAMFGVECASGDTFTDGSTSLTMSSMFVPEPVISLAIKAK-GIETPNFSRALQRFQKEDPTFKVHTDQTTKETIISGMGELHLEIYVERMKREYNVDCTTGKPRVNFRETVTQRADFNHTHKKQTGG 568          
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|1032653829|gb|OAQ35098.1| (translation elongation factor G [Mortierella elongata AG-77])

HSP 1 Score: 256.529 bits (654), Expect = 7.041e-78
Identity = 116/174 (66.67%), Postives = 142/174 (81.61%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGG 174
            MRVYQG ++RGG++ N++NDKKVKVPRLVRMH++ELE++D I  G++CAMFGVDCSS D+FTDG ++Y +TSMFVP PVISL++KPK      NFSKAL RF KEDPT +V  + +TKET+ISGMGELHLEIYVER++REYNVDC  G P V +RE I   + FNY HKKQSGG
Sbjct:  406 MRVYQGMLRRGGFITNVKNDKKVKVPRLVRMHADELEDVDEIGPGEICAMFGVDCSSGDTFTDGALQYTMTSMFVPNPVISLSLKPKGKET-PNFSKALNRFQKEDPTFKVHVDSETKETIISGMGELHLEIYVERMRREYNVDCVTGKPQVAFREAITDGSKFNYTHKKQSGG 578          
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|1001618124|gb|KXS21863.1| (translation elongation factor G [Gonapodya prolifera JEL478])

HSP 1 Score: 256.529 bits (654), Expect = 8.203e-78
Identity = 105/174 (60.34%), Postives = 147/174 (84.48%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGG 174
            +RVYQG++K+GG++ N++  KKVKVPRLVRMHS+E+E++D + +G++CA+FG+DC+S D+FTDG V+Y++TSMFVP PVISL+++PK      NFSKAL +F +EDPT +V  + ++K+T+ISGMGELHLE+YVER++REY VDC+ G P V +RETI+K+ +FNY HKKQSGG
Sbjct:  416 LRVYQGSVKKGGYIVNVKTGKKVKVPRLVRMHSDEMEDVDEVGSGEICALFGIDCASGDTFTDGRVQYSMTSMFVPEPVISLSIEPKAKEATTNFSKALNKFTREDPTFRVHVDSESKQTIISGMGELHLEVYVERMRREYKVDCTTGKPQVAFRETIQKRVDFNYTHKKQSGG 589          
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|1012965229|gb|KYQ39981.1| (Elongation factor G, mitochondrial [Hypsizygus marmoreus])

HSP 1 Score: 255.373 bits (651), Expect = 2.017e-77
Identity = 115/174 (66.09%), Postives = 141/174 (81.03%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGG 174
            MRVYQGT+KRG  +YN R  KKVKVPRLVRMHSNE+E++DS+  G++CAMFGV+CSS D+FTDG+  Y++TSMFVP PVISLA+K        NFS+AL RF KEDPT +V  +  +KET+ISGMGELHLEIYVER++REYNVDC+ G P V +RETI ++A FNY HKKQ+GG
Sbjct:  406 MRVYQGTLKRGNIIYNARTGKKVKVPRLVRMHSNEMEDVDSVGPGEICAMFGVECSSGDTFTDGSTSYSMTSMFVPEPVISLAIK-ANGIETPNFSRALNRFQKEDPTFRVHMDRDSKETIISGMGELHLEIYVERMRREYNVDCTTGKPRVAFRETITQRAEFNYTHKKQTGG 578          
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|751002771|gb|KIK44895.1| (hypothetical protein CY34DRAFT_802251 [Suillus luteus UH-Slu-Lm8-n1])

HSP 1 Score: 255.373 bits (651), Expect = 2.236e-77
Identity = 115/174 (66.09%), Postives = 145/174 (83.33%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGG 174
            MRVYQGT+K+GG +YN R  KKVKVPRLVRMHSNE+E+I+SI  G++CA+FGV+CSS D+FTDG+  +++TSMFVP PVISLA+KP+      NFS+AL RF KEDPT +V  ++++KET+ISGMGELHLEIYVER++REYNV CS G P V +RETI ++A FNY HKKQ+GG
Sbjct:  405 MRVYQGTLKKGGIIYNARTGKKVKVPRLVRMHSNEMEDIESIGPGEICAIFGVECSSGDTFTDGSTSFSMTSMFVPEPVISLAIKPEGKET-PNFSRALNRFQKEDPTFRVHLDKESKETIISGMGELHLEIYVERMRREYNVACSTGKPRVAFRETIMQRAEFNYTHKKQTGG 577          
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|1041764984|gb|OBW69638.1| (Uncharacterized protein AUREO_003100 [Aureobasidium pullulans])

HSP 1 Score: 254.218 bits (648), Expect = 8.280e-77
Identity = 112/174 (64.37%), Postives = 146/174 (83.91%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGG 174
            +RVYQGTIK+G  +YN RNDKKVK+PR+VRMHSNE+EE++ I AG++CA+FGVDC+S D+FTDGT+ Y +TSMFVP  VISL++KPKQ+    NFSKA+ RF +EDPT +V  + +++ET+ISGMGELHL+IYVER++REYNVDC VG P V YRETI+ K  F+++ KKQ+GG
Sbjct:  428 IRVYQGTIKKGQVVYNARNDKKVKIPRIVRMHSNEMEEVNEIHAGEICAVFGVDCASGDTFTDGTLGYTMTSMFVPDAVISLSIKPKQTKDTPNFSKAMSRFQREDPTFRVHVDTESQETIISGMGELHLDIYVERMRREYNVDCIVGQPQVAYRETIQSKIPFDHILKKQTGG 601          
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|662527706|gb|KEQ85085.1| (elongation factor G, mitochondrial [Aureobasidium pullulans EXF-150])

HSP 1 Score: 254.218 bits (648), Expect = 8.725e-77
Identity = 112/174 (64.37%), Postives = 146/174 (83.91%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGG 174
            +RVYQGTIK+G  +YN RNDKKVK+PR+VRMHSNE+EE++ I AG++CA+FGVDC+S D+FTDGT+ Y +TSMFVP  VISL++KPKQ+    NFSKA+ RF +EDPT +V  + +++ET+ISGMGELHL+IYVER++REYNVDC VG P V YRETI+ K  F+++ KKQ+GG
Sbjct:  428 IRVYQGTIKKGQVVYNARNDKKVKIPRIVRMHSNEMEEVNEIHAGEICAVFGVDCASGDTFTDGTLGYTMTSMFVPDAVISLSIKPKQTKDTPNFSKAMSRFQREDPTFRVHVDTESQETIISGMGELHLDIYVERMRREYNVDCIVGQPQVAYRETIQSKIPFDHILKKQTGG 601          
BLAST of EWM22991.1 vs. NCBI_GenBank
Match: gi|1035383563|gb|OAX40090.1| (translation elongation factor G [Rhizopogon vinicolor AM-OR11-026])

HSP 1 Score: 252.677 bits (644), Expect = 2.127e-76
Identity = 113/174 (64.94%), Postives = 145/174 (83.33%), Query Frame = 0
Query:    1 MRVYQGTIKRGGWLYNMRNDKKVKVPRLVRMHSNELEEIDSISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQSAMFANFSKALQRFCKEDPTLQVAFNEKTKETVISGMGELHLEIYVERLKREYNVDCSVGNPNVNYRETIRKKANFNYLHKKQSGG 174
            MRVYQGT+K+ G +YN R  KKVKVPRLVRMHSNE+E+I+SI  G++CA+FGV+CSS D+FTDG+  +++TSMFVP PVISLA++P Q     NFS+AL RF KEDPT +V  ++++KET+ISGMGELHLEIYVER++REYNV C+ G P V +RETI ++A+FNY HKKQ+GG
Sbjct:  406 MRVYQGTLKKSGIIYNARTGKKVKVPRLVRMHSNEMEDIESIGPGEICAIFGVECSSGDTFTDGSTSFSMTSMFVPEPVISLAIQP-QGKETPNFSRALNRFQKEDPTFRVHLDKESKETIISGMGELHLEIYVERMRREYNVACTTGKPRVAFRETITQRADFNYTHKKQTGG 578          
The following BLAST results are available for this feature:
BLAST of EWM22991.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103742|gb|EWM22991.1|1.181e-140100.00translation elongation factor [Nannochloropsis gad... [more]
gi|672824186|gb|KFH69079.1|2.816e-7966.09elongation factor G, mitochondrial [Mortierella ve... [more]
gi|751174051|gb|KIL60069.1|1.300e-7866.09hypothetical protein M378DRAFT_84328 [Amanita musc... [more]
gi|1032653829|gb|OAQ35098.1|7.041e-7866.67translation elongation factor G [Mortierella elong... [more]
gi|1001618124|gb|KXS21863.1|8.203e-7860.34translation elongation factor G [Gonapodya prolife... [more]
gi|1012965229|gb|KYQ39981.1|2.017e-7766.09Elongation factor G, mitochondrial [Hypsizygus mar... [more]
gi|751002771|gb|KIK44895.1|2.236e-7766.09hypothetical protein CY34DRAFT_802251 [Suillus lut... [more]
gi|1041764984|gb|OBW69638.1|8.280e-7764.37Uncharacterized protein AUREO_003100 [Aureobasidiu... [more]
gi|662527706|gb|KEQ85085.1|8.725e-7764.37elongation factor G, mitochondrial [Aureobasidium ... [more]
gi|1035383563|gb|OAX40090.1|2.127e-7664.94translation elongation factor G [Rhizopogon vinico... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7703rna7703Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications