EWM22993.1, cds7681 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|585103747|gb|EWM22993.1| (mitochondrial elongation factor [Nannochloropsis gaditana]) HSP 1 Score: 225.713 bits (574), Expect = 5.984e-75 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 Query: 1 MPLSLLSRYGRQRASACHGLNARNFYTSSSWLLQRQHATKHKHSVLPQTSFWVRGLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKVRGG 109 MPLSLLSRYGRQRASACHGLNARNFYTSSSWLLQRQHATKHKHSVLPQTSFWVRGLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKVRGG Sbjct: 1 MPLSLLSRYGRQRASACHGLNARNFYTSSSWLLQRQHATKHKHSVLPQTSFWVRGLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKVRGG 109
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|290990117|ref|XP_002677683.1| (mitochondrial elongation factor EfG [Naegleria gruberi] >gi|284091292|gb|EFC44939.1| mitochondrial elongation factor EfG [Naegleria gruberi]) HSP 1 Score: 80.8777 bits (198), Expect = 1.485e-15 Identity = 36/39 (92.31%), Postives = 39/39 (100.00%), Query Frame = 0 Query: 67 HIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVK 105 H+AKLRNIGISAHIDSGKTTLTERILFYTGRI+EIH+VK Sbjct: 11 HLAKLRNIGISAHIDSGKTTLTERILFYTGRIKEIHEVK 49
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|1178060116|gb|ORE14710.1| (translation elongation factor G [Rhizopus microsporus]) HSP 1 Score: 80.4925 bits (197), Expect = 2.174e-15 Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 0 Query: 27 TSSSWLLQRQHATKHKHSVLPQTSFWVRGLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKVRGG 109 T+SS+L H+T S+ P R ++ A + D + KLRNIGISAHIDSGKTT TERIL+YTGRI+EIHDV+ R G Sbjct: 20 TASSFLEATPHST---FSLFP-IGMGRRFQSTEADAKDLDRLKKLRNIGISAHIDSGKTTCTERILYYTGRIKEIHDVRGRDG 98
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|1183487231|gb|ORZ10951.1| (translation elongation factor G [Lobosporangium transversale] >gi|1183488031|gb|ORZ11743.1| translation elongation factor G [Lobosporangium transversale]) HSP 1 Score: 80.1073 bits (196), Expect = 2.944e-15 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 0 Query: 20 LNARNFYTSSSWLLQRQHATKHKHSVLPQTSFWVRGLASAASDEI-PDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVK 105 N Y W +Q+ HA + VL + +SA++ + P I +LRNIGISAHIDSGKTTLTER+LF+TGRI +IH+V+ Sbjct: 41 FNPDMLYLQPRWHVQKDHAAQGTGKVL--VGMIQKRWSSASAQPVKPGSIDRLRNIGISAHIDSGKTTLTERVLFFTGRINQIHEVR 125
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|729712284|emb|CEI91397.1| (Putative Elongation factor G [Rhizopus microsporus]) HSP 1 Score: 80.1073 bits (196), Expect = 3.030e-15 Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 0 Query: 27 TSSSWLLQRQHATKHKHSVLPQTSFWVRGLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKVRGG 109 T+SS+L H+T S+ P R ++ A + D + KLRNIGISAHIDSGKTT TERIL+YTGRI+EIHDV+ R G Sbjct: 20 TASSFLEATPHST---FSLFP-IGMGRRFQSTEADAKDLDRLKKLRNIGISAHIDSGKTTCTERILYYTGRIKEIHDVRGRDG 98
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|213405577|ref|XP_002173560.1| (translation elongation factor G [Schizosaccharomyces japonicus yFS275] >gi|261263158|sp|B6K286.1|EFGM_SCHJY RecName: Full=Elongation factor G, mitochondrial; Short=EF-Gmt; AltName: Full=Elongation factor G 1, mitochondrial; Short=mEF-G 1; AltName: Full=Elongation factor G1; Flags: Precursor >gi|212001607|gb|EEB07267.1| translation elongation factor G [Schizosaccharomyces japonicus yFS275]) HSP 1 Score: 79.7221 bits (195), Expect = 3.403e-15 Identity = 35/60 (58.33%), Postives = 49/60 (81.67%), Query Frame = 0 Query: 46 LPQTSFWVRGLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVK 105 +P+ F+ G + ++ IPD +++LRNIGISAHIDSGKTT TER+LFYTGRI++IH+V+ Sbjct: 40 IPKRLFYSTG---SRANSIPDALSRLRNIGISAHIDSGKTTFTERVLFYTGRIKDIHEVR 96
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|511010461|gb|EPB91682.1| (elongation factor G, mitochondrial [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 79.337 bits (194), Expect = 4.463e-15 Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 36 QHATKHKHSVLPQTSFWVRGLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKVRGG 109 Q A ++ S+LP R +S A + + + KLRNIGISAHIDSGKTT TERIL+YTGRI+EIHDV+ R G Sbjct: 26 QAAPQNTFSLLP-IGLGRRWQSSEAEAKDLERLQKLRNIGISAHIDSGKTTCTERILYYTGRIKEIHDVRGRDG 98
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|1178051020|gb|ORE06627.1| (translation elongation factor G [Rhizopus microsporus var. microsporus]) HSP 1 Score: 79.337 bits (194), Expect = 4.550e-15 Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 0 Query: 27 TSSSWLLQRQHATKHKHSVLPQTSFWVRGLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKVRGG 109 T+SS+L H+T S+ P R ++ A + D + KLRNIGISAHIDSGKTT TERIL+YTGRI+EIHDV+ R G Sbjct: 20 TASSFLEVTPHST---FSLFP-IGMGRRFQSTEADAKDLDRLNKLRNIGISAHIDSGKTTCTERILYYTGRIKEIHDVRGRDG 98
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|754343650|ref|XP_004364364.2| (translation elongation factor G [Capsaspora owczarzaki ATCC 30864] >gi|765549527|gb|KJE90148.1| translation elongation factor G [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 79.337 bits (194), Expect = 5.021e-15 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0 Query: 55 GLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKVRGG 109 +AS+A +A++RNIGISAHIDSGKTTLTERILFYTGRI+EIH+VK R G Sbjct: 55 AVASSADGAASFDLARVRNIGISAHIDSGKTTLTERILFYTGRIKEIHEVKGRDG 109
BLAST of EWM22993.1 vs. NCBI_GenBank
Match: gi|758348116|dbj|GAN09590.1| (elongation factor G mitochondrial [Mucor ambiguus]) HSP 1 Score: 79.337 bits (194), Expect = 5.226e-15 Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 36 QHATKHKHSVLPQTSFWVRGLASAASDEIPDHIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKVRGG 109 Q A ++ S+LP R +S A + + + KLRNIGISAHIDSGKTT TERIL+YTGRI+EIHDV+ R G Sbjct: 26 QAAPQNTFSLLP-IGLGRRWQSSEAEAKDLERLQKLRNIGISAHIDSGKTTCTERILYYTGRIKEIHDVRGRDG 98 The following BLAST results are available for this feature:
BLAST of EWM22993.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|