EWM23001.1, cds7673 (CDS) Nannochloropsis gaditana

Overview
NameEWM23001.1
Unique Namecds7673
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:103012..103527 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23001.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101650g1.5900.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:103012..103527 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23001.1 vs. NCBI_GenBank
Match: gi|585103767|gb|EWM23001.1| (hypothetical protein Naga_101650g1 [Nannochloropsis gaditana])

HSP 1 Score: 340.502 bits (872), Expect = 2.457e-118
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 
Query:    1 MPRVSDASSSSPSRPVKPSCRDPPRPSDRPRGNALHTPGRSQSGDPPPLKRGRQASIQDAFASTPAFNPEFSQPVATFPEKGEVIDVEAEGLMEGEGGKEGDLMPPETQKTPAKVPETRATRKSGVEGEDWQQKGKRTDKMKAAVEVVEEEEEGPEEGGRFVPIHLHKVSA 171
            MPRVSDASSSSPSRPVKPSCRDPPRPSDRPRGNALHTPGRSQSGDPPPLKRGRQASIQDAFASTPAFNPEFSQPVATFPEKGEVIDVEAEGLMEGEGGKEGDLMPPETQKTPAKVPETRATRKSGVEGEDWQQKGKRTDKMKAAVEVVEEEEEGPEEGGRFVPIHLHKVSA
Sbjct:    1 MPRVSDASSSSPSRPVKPSCRDPPRPSDRPRGNALHTPGRSQSGDPPPLKRGRQASIQDAFASTPAFNPEFSQPVATFPEKGEVIDVEAEGLMEGEGGKEGDLMPPETQKTPAKVPETRATRKSGVEGEDWQQKGKRTDKMKAAVEVVEEEEEGPEEGGRFVPIHLHKVSA 171
The following BLAST results are available for this feature:
BLAST of EWM23001.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103767|gb|EWM23001.1|2.457e-118100.00hypothetical protein Naga_101650g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7694rna7694Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications