EWM23003.1, cds7670 (CDS) Nannochloropsis gaditana

Overview
NameEWM23003.1
Unique Namecds7670
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:71458..72240 -

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Properties
Property NameValue
Protein idEWM23003.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101381g1.7401.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:71458..72240 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23003.1 vs. NCBI_GenBank
Match: gi|585103775|gb|EWM23003.1| (hypothetical protein Naga_101381g1 [Nannochloropsis gaditana])

HSP 1 Score: 509.22 bits (1310), Expect = 0.000e+0
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 
Query:    1 MRPKPPTSSGTSTLSSQPSPAGLPPPVIAPEENSSLHMGHRAAPSLPLHDASSCSGSNAISRDRLKAFNETNLLREKEVQPGAASSSRPSPFPSSSSSSSSSSSFIFSSSSTSSPERGGSLDHPQPSGPEMEGKGHVGREREITRVVELMASEGGRNNHERGGEGDRIHARKTEAMRKGGAPAPYPPFPPLTRQGGREGGGEGRREEEVAMACSVALPSSYFLPPSRRERREKVMKESAKVRWEGGRADRRDGKGEGKER 260
            MRPKPPTSSGTSTLSSQPSPAGLPPPVIAPEENSSLHMGHRAAPSLPLHDASSCSGSNAISRDRLKAFNETNLLREKEVQPGAASSSRPSPFPSSSSSSSSSSSFIFSSSSTSSPERGGSLDHPQPSGPEMEGKGHVGREREITRVVELMASEGGRNNHERGGEGDRIHARKTEAMRKGGAPAPYPPFPPLTRQGGREGGGEGRREEEVAMACSVALPSSYFLPPSRRERREKVMKESAKVRWEGGRADRRDGKGEGKER
Sbjct:    1 MRPKPPTSSGTSTLSSQPSPAGLPPPVIAPEENSSLHMGHRAAPSLPLHDASSCSGSNAISRDRLKAFNETNLLREKEVQPGAASSSRPSPFPSSSSSSSSSSSFIFSSSSTSSPERGGSLDHPQPSGPEMEGKGHVGREREITRVVELMASEGGRNNHERGGEGDRIHARKTEAMRKGGAPAPYPPFPPLTRQGGREGGGEGRREEEVAMACSVALPSSYFLPPSRRERREKVMKESAKVRWEGGRADRRDGKGEGKER 260
[Close]
BLAST of EWM23003.1 vs. NCBI_GenBank
Match: gi|553181690|ref|XP_005853608.1| (hypothetical protein NGA_0435500, partial [Nannochloropsis gaditana CCMP526] >gi|422295453|gb|EKU22752.1| hypothetical protein NGA_0435500, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 223.787 bits (569), Expect = 2.271e-71
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0 
Query:    1 MRPKPPTSSGTSTLSSQPSPAGLPPPVIAPEENSSLHMGHRAAPSLPLHDASSCSGSNAISRDRLKAFNETNLLREKEVQPGAASSSRPSPFPSSSSSSSSSSSFIF-SSSSTSSPERGGSLDHPQ 125
            MRPKPPTSSGTSTLSSQPSPAGLPPPVIAPEENSSLHMGHRA PSLPLH+ASSCSGSNAISR RLKAFNETNLLREKEVQPGAASSSRPSPFPSSSSSSSSSSSFIF SSSSTSSPERGGSLDHPQ
Sbjct:    1 MRPKPPTSSGTSTLSSQPSPAGLPPPVIAPEENSSLHMGHRAPPSLPLHEASSCSGSNAISRGRLKAFNETNLLREKEVQPGAASSSRPSPFPSSSSSSSSSSSFIFSSSSSTSSPERGGSLDHPQ 126
The following BLAST results are available for this feature:
BLAST of EWM23003.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103775|gb|EWM23003.1|0.000e+0100.00hypothetical protein Naga_101381g1 [Nannochloropsi... [more]
gi|553181690|ref|XP_005853608.1|2.271e-7196.83hypothetical protein NGA_0435500, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7691rna7691Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications