EWM29895.1, cds766 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|585112478|gb|EWM29895.1| (2fe-2s iron-sulfur cluster binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 381.333 bits (978), Expect = 5.040e-134 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 Query: 1 MASALLAKKALRQALAVGAHSQATVGRRSGAVINSTGSSRRTLASVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPADCP 183 MASALLAKKALRQALAVGAHSQATVGRRSGAVINSTGSSRRTLASVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPADCP Sbjct: 1 MASALLAKKALRQALAVGAHSQATVGRRSGAVINSTGSSRRTLASVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPADCP 183
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|298708886|emb|CBJ30843.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 137.502 bits (345), Expect = 4.812e-38 Identity = 73/171 (42.69%), Postives = 103/171 (60.23%), Query Frame = 0 Query: 11 LRQALAVGAHSQATVGRR--SGAVINSTGSSRRTLASVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPP 179 LR AL G + RR SG ++S + RR L+S+++ V VTF++ EG R TV GQ++ +VA+ H+I L+ C G Q ++SE WTEDLFG+GP C CHV + + I +P + E LLE + A +SRLGCQ+ L+++LDG+ VFIPDGPP Sbjct: 2 LRTALQTGV---GCLPRRAASGGAVSSAQAGRRALSSLQEALVKVTFVDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKAGAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTEKI---EPPLDSEISLLERKGELYAPGSSRLGCQIKLSRDLDGITVFIPDGPP 166
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|669136618|ref|XP_008603877.1| (hypothetical protein SDRG_00189 [Saprolegnia diclina VS20] >gi|530744212|gb|EQC42454.1| hypothetical protein SDRG_00189 [Saprolegnia diclina VS20]) HSP 1 Score: 106.686 bits (265), Expect = 1.099e-25 Identity = 56/140 (40.00%), Postives = 85/140 (60.71%), Query Frame = 0 Query: 46 VKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPA-TEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPADC 182 V+D V VT +++EG R + GRVGQ+L + Q+ DI + GGGG+ + +TE LFG GP HV + + W++ K PA TE+E +LE+ +E+ T NSRLG +++LTK+LDG+ V +P+ PP + Sbjct: 27 VRDHLVAVTLLDYEGSRHIIQGRVGQTLFEACQLSGLDIVKDDSLGGGGSAYSAVRTPEFTESLFGEGPSSPLSHVVVSNEWVH----KLPAPTEREARILEDVPEEDLTKNSRLGTEIILTKDLDGLVVAVPEAPPVET 162
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|813178612|ref|XP_012205775.1| (hypothetical protein SPRG_11382 [Saprolegnia parasitica CBS 223.65] >gi|641529278|gb|KDO23459.1| hypothetical protein SPRG_11382 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 105.531 bits (262), Expect = 2.770e-25 Identity = 54/139 (38.85%), Postives = 82/139 (58.99%), Query Frame = 0 Query: 46 VKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPADC 182 V+D V VT +++EG R + GRVGQ+L + Q+ DI + GGGGA + +TE LFG GP HV + + W+ H +E+E +LE+ +E+ T NSRLG +++LTK+LDG+ V +P+ PP + Sbjct: 27 VRDHLVAVTLLDYEGSRHIIQGRVGQTLFEACQLSGLDIVKDDSLGGGGATYSAVRTPEFTESLFGEGPSSPLSHVVVSNEWV---HKLPVPSEREARILEDVPEEDLTKNSRLGTEIILTKDLDGLVVAVPEAPPVET 162
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|1173944902|gb|OQR93588.1| (hypothetical protein ACHHYP_02409 [Achlya hypogyna]) HSP 1 Score: 104.375 bits (259), Expect = 7.655e-25 Identity = 55/139 (39.57%), Postives = 85/139 (61.15%), Query Frame = 0 Query: 46 VKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIEL--ESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPADC 182 V+D V+VT ++ EG R V GRVGQ+L + Q+ ++L + GGGGA+ S +TE+LFG GP HV I + W+ H +E+E +LE+ +E+ T NSRLG +++LTK+L+G+ V +P+ PP + Sbjct: 26 VRDHLVSVTLLDWEGSRHLVQGRVGQTLFEACQLAGLDLVKDDSLGGGGAMYSAVRSPEFTENLFGEGPSSPLSHVVISNEWV---HKLPLPSEREARILEDVPEEDLTKNSRLGTEIILTKDLEGLVVAVPEAPPIET 161
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|1173960018|gb|OQS06186.1| (hypothetical protein THRCLA_01755 [Thraustotheca clavata]) HSP 1 Score: 109.768 bits (273), Expect = 1.664e-24 Identity = 57/138 (41.30%), Postives = 83/138 (60.14%), Query Frame = 0 Query: 46 VKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPAD 181 V D V+VT ++ EG R V GRVGQ+L D Q+ DI + GGGGA + +TE LFG GP HV + + W N + PA+++E +LE+ +E+ T NSRLG +++LTK+LDG+ V +P+ PP + Sbjct: 27 VHDRLVSVTLLDWEGSRHIVQGRVGQTLFDACQLSGVDIVKDDSLGGGGATYSAIRTPEFTESLFGEGPASPLSHVVVSNEWFNKL---PPASDRELRILEDVPEEDLTKNSRLGTEIILTKDLDGLVVAVPEAPPVE 161
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|325182261|emb|CCA16715.1| (conserved hypothetical protein [Albugo laibachii Nc14] >gi|325187280|emb|CCA21820.1| conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 98.2117 bits (243), Expect = 2.154e-22 Identity = 52/137 (37.96%), Postives = 81/137 (59.12%), Query Frame = 0 Query: 44 ASVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIE-LESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPP 179 + V D+ V VT I++ G R V GRVGQ+L QM+DI+ L+ GGG V S+ +TE LFG G HV + + W+ + +P +++H L +E+ + NSRLG +++LTK++DG+ V +P+ PP Sbjct: 34 SKVSDIVVGVTLIDYSGNRQYVQGRVGQTLCQACQMNDIDLLKDDSNGGGDVHSAVRSDYYTESLFGEGSVSPTSHVIVSNEWMPRL--PRPNDQEQHILDVYVPEEDRSANSRLGTEIILTKDMDGLVVAVPEAPP 168
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|673033788|ref|XP_008870855.1| (hypothetical protein H310_07275 [Aphanomyces invadans] >gi|574473717|gb|ETW00720.1| hypothetical protein H310_07275 [Aphanomyces invadans]) HSP 1 Score: 97.8265 bits (242), Expect = 2.375e-22 Identity = 52/139 (37.41%), Postives = 86/139 (61.87%), Query Frame = 0 Query: 46 VKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPADC 182 V+D V+VT ++ EG R V GRVGQSL + +++ DI + GGGGA + +TE+LFG GP HV + + W++ + QP TE+E +L++ +E+ T+NSRL +++L+K+L+G+ V +P+ P + Sbjct: 26 VRDQIVSVTLLDWEGSRHIVQGRVGQSLFEASRLAGLDIIQDDSLGGGGASYSAVRTPEFTENLFGEGPSSFLSHVVVSNEWVDKL--PQP-TEREVRILQDVPEEDWTENSRLATEIILSKDLEGLVVAVPEAQPIET 161
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|698786414|ref|XP_009826239.1| (hypothetical protein H257_03721 [Aphanomyces astaci] >gi|574119067|gb|ETV84547.1| hypothetical protein H257_03721 [Aphanomyces astaci]) HSP 1 Score: 97.4413 bits (241), Expect = 3.274e-22 Identity = 53/140 (37.86%), Postives = 84/140 (60.00%), Query Frame = 0 Query: 46 VKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMH--DIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQP-ATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPPADC 182 V+D V+VT ++ EG R V GRVGQSL + +++ DI + GGGGA + +TE+LFG GP HV + + W+ DK P T++E +LE+ +++ T NSRL +++LTK+L+G+ V +P+ P + Sbjct: 26 VRDQIVSVTLLDWEGSRHVVQGRVGQSLFEASRLSGLDIIQDDTLGGGGAAYSAIRTPEFTENLFGEGPASFLSHVVVSNEWV----DKLPLPTDREVRILEDVPEDDWTKNSRLATEIILTKDLEGLVVAVPEAQPIET 161
BLAST of EWM29895.1 vs. NCBI_GenBank
Match: gi|855300262|ref|XP_012893672.1| (uncharacterized protein [Blastocystis hominis] >gi|300120070|emb|CBK19624.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 92.0485 bits (227), Expect = 2.054e-20 Identity = 53/145 (36.55%), Postives = 78/145 (53.79%), Query Frame = 0 Query: 31 AVINSTGSSRRTLASVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIP 175 A G S ++V + T+++TFI +G TV R+G ++LD A+ + + + C G G + K +E WTE+ FG GP C FCHV +PS ++ + +K A E E E T SRL CQV +TK ++G FIP Sbjct: 14 ATYACIGRSISWTSAVAENTIDLTFITPKGESKTVKARIGDTVLDTAEAYGLPICGDCHGAGLPRAVKRTENWTEETFGEGPSCAFCHV-VPSLELSKVLEKPTAQELE---FIEKIPIGKTPRSRLACQVPVTKEMNGGVFFIP 154 The following BLAST results are available for this feature:
BLAST of EWM29895.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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