EWM23015.1, cds7658 (CDS) Nannochloropsis gaditana

Overview
NameEWM23015.1
Unique Namecds7658
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:41405..41538 +
Alignment locationCM002473.1:41719..41800 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23015.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103208g1.3555.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:41405..41538 +
CM002473.1supercontigCM002473.1:41719..41800 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23015.1 vs. NCBI_GenBank
Match: gi|585103803|gb|EWM23015.1| (hypothetical protein Naga_103208g1 [Nannochloropsis gaditana])

HSP 1 Score: 149.058 bits (375), Expect = 1.177e-45
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:    1 MNYALLLHNKTTTLWPSFEPRFVIDTGRNGKVSKVEAQRIPRMYLRICATPAPTGAISEGRGSGIDPRSRR 71
            MNYALLLHNKTTTLWPSFEPRFVIDTGRNGKVSKVEAQRIPRMYLRICATPAPTGAISEGRGSGIDPRSRR
Sbjct:    1 MNYALLLHNKTTTLWPSFEPRFVIDTGRNGKVSKVEAQRIPRMYLRICATPAPTGAISEGRGSGIDPRSRR 71
The following BLAST results are available for this feature:
BLAST of EWM23015.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103803|gb|EWM23015.1|1.177e-45100.00hypothetical protein Naga_103208g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7678rna7678Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications