EWM23017.1, cds7657 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23017.1 vs. NCBI_GenBank
Match: gi|585103807|gb|EWM23017.1| (1, 4-beta cellobiohydrolase [Nannochloropsis gaditana]) HSP 1 Score: 192.2 bits (487), Expect = 5.160e-62 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 Query: 1 MPRLFVSSVALVGAALFCSSSSLAHEAKTVEVTTRSAKPKGENIFKGAEMYVNPYFQEELDSSIKTASGEVKKTLQSIRGLSSAYWLDVKSKVG 94 MPRLFVSSVALVGAALFCSSSSLAHEAKTVEVTTRSAKPKGENIFKGAEMYVNPYFQEELDSSIKTASGEVKKTLQSIRGLSSAYWLDVKSKVG Sbjct: 1 MPRLFVSSVALVGAALFCSSSSLAHEAKTVEVTTRSAKPKGENIFKGAEMYVNPYFQEELDSSIKTASGEVKKTLQSIRGLSSAYWLDVKSKVG 94
BLAST of EWM23017.1 vs. NCBI_GenBank
Match: gi|1129152537|gb|OLP73243.1| (Exoglucanase 3, partial [Symbiodinium microadriaticum]) HSP 1 Score: 60.8474 bits (146), Expect = 9.571e-9 Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 0 Query: 39 PKGENIFKGAEMYVNPYFQEELDSSIKTASGEVKKTLQSIRGLSSAYWLDVKSKV 93 P G N F+G YVNP +++ L +SI SG V+ TL+S++ + SA+W+DVKSK+ Sbjct: 25 PVGSNPFEGHPWYVNPSYRDLLSTSINLTSGGVRATLESMQNVPSAFWIDVKSKI 79
BLAST of EWM23017.1 vs. NCBI_GenBank
Match: gi|1129185624|gb|OLP91954.1| (Exoglucanase 3 [Symbiodinium microadriaticum]) HSP 1 Score: 58.9214 bits (141), Expect = 4.544e-8 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0 Query: 38 KPKGENIFKGAEMYVNPYFQEELDSSIKTASGEVKKTLQSIRGLSSAYWLDVKSKV 93 KP G N F+ YVNP +Q L SSI+TA G +K+TL+++ L SAYWLD + K+ Sbjct: 514 KPDG-NPFEDKVFYVNPSYQASLTSSIETAEGPIKETLEAMMDLPSAYWLDKRDKI 568 HSP 2 Score: 56.6102 bits (135), Expect = 3.101e-7 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0 Query: 43 NIFKGAEMYVNPYFQEELDSSIKTASGEVKKTLQSIRGLSSAYWLDVKSKV 93 N F+ YVNP +Q L SSI+TA G +K+TL+++ L SAYWLD + K+ Sbjct: 85 NPFEDKVFYVNPSYQASLTSSIETAEGPIKETLEAMMDLPSAYWLDKRDKI 135
BLAST of EWM23017.1 vs. NCBI_GenBank
Match: gi|1129190621|gb|OLP95804.1| (Endoglucanase [Symbiodinium microadriaticum]) HSP 1 Score: 56.6102 bits (135), Expect = 2.485e-7 Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 0 Query: 41 GENIFKGAEMYVNPYFQEELDSSIKTASGEVKKTLQSIRGLSSAYWLDVKSKV 93 G N F+G YVNP +++ L +SI SG V+ TL+S++ + SA+W+DVKSK+ Sbjct: 1606 GSNPFEGHPWYVNPSYRDLLSTSINLTSGGVRATLESMQNVPSAFWIDVKSKI 1658 The following BLAST results are available for this feature:
BLAST of EWM23017.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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