EWM23019.1, cds7654 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23019.1 vs. NCBI_GenBank
Match: gi|585103811|gb|EWM23019.1| (cytochrome b5 [Nannochloropsis gaditana]) HSP 1 Score: 272.322 bits (695), Expect = 1.370e-92 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 Query: 1 MDIRIEVFTLVPLYLGRSATERLLPVAQTMFSKLFKSHKKDEPLKPFQGDLEGLWYLEGKAYDLTKFVKMHPGGSDVLLELKGKDGTAAFRDAHGNNPTSTPRKKLGRMEVKGISAEVLSSRFSGDRDQCPP 132 MDIRIEVFTLVPLYLGRSATERLLPVAQTMFSKLFKSHKKDEPLKPFQGDLEGLWYLEGKAYDLTKFVKMHPGGSDVLLELKGKDGTAAFRDAHGNNPTSTPRKKLGRMEVKGISAEVLSSRFSGDRDQCPP Sbjct: 1 MDIRIEVFTLVPLYLGRSATERLLPVAQTMFSKLFKSHKKDEPLKPFQGDLEGLWYLEGKAYDLTKFVKMHPGGSDVLLELKGKDGTAAFRDAHGNNPTSTPRKKLGRMEVKGISAEVLSSRFSGDRDQCPP 132
BLAST of EWM23019.1 vs. NCBI_GenBank
Match: gi|585111941|gb|EWM29412.1| (Cytochrome b5, heme-binding site [Nannochloropsis gaditana]) HSP 1 Score: 63.1586 bits (152), Expect = 4.096e-9 Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 0 Query: 54 LWYLEGKAYDLTKFVKMHPGGSDVLLELKGKDGTAAFRDAHGNNP-TSTPRKKLGRMEVKGISAEVLSSR 122 LWY+ G+AYDLT F+ HPGG VLL +G+D TA F H P T P K L +M+ +S ++L+ + Sbjct: 67 LWYIHGRAYDLTDFINKHPGGPTVLLNTQGRDCTALFEAFH---PFTDRPAKLLAKMKEVKVSPDILAEK 133
BLAST of EWM23019.1 vs. NCBI_GenBank
Match: gi|599359820|ref|XP_007393095.1| (hypothetical protein PHACADRAFT_251577 [Phanerochaete carnosa HHB-10118-sp] >gi|409048272|gb|EKM57750.1| hypothetical protein PHACADRAFT_251577 [Phanerochaete carnosa HHB-10118-sp]) HSP 1 Score: 58.5362 bits (140), Expect = 1.888e-7 Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 0 Query: 30 MFSKLFKSHKKDEPLKPFQGDLEGLWYL-EGKAYDLTKFVKMHPGGSDVLL--ELKGKDGTAAFRDAHGNNPTSTPRKKLGRMEVKGISAE--VLSSRFSGDRDQCP 131 M SK + + +DE K + D LW + +GK YD+T+F MHPGGS V L E+ G+D T AF H + P + R+++ ++ E V+ +R +G + P Sbjct: 1 MASKQLREYTRDEVAKHNKAD--DLWIIIDGKVYDVTRFKGMHPGGSSVFLDEEIPGQDATEAFYALHRHEVLQRP--QYARLQIGTVTGEESVVVARVAGALSKVP 103
BLAST of EWM23019.1 vs. NCBI_GenBank
Match: gi|742075604|gb|KIA75575.1| (cytochrome b5 [Aspergillus ustus]) HSP 1 Score: 55.8398 bits (133), Expect = 2.439e-7 Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0 Query: 28 QTMFSKLFKSHKKDEPLKPFQGDLEGLWYLEGKAYDLTKFVKMHPGGSDVLLELKGKDGTAAFRDA-HGNNPTSTPRKKLGRMEV 111 +T + SHK +GDL + K YD+T FV HPGG +VLLE+ G+DGT AF D H +N R+ L R+EV Sbjct: 3 KTFTTAEVASHKT-------KGDL--YIVIHDKIYDVTSFVDEHPGGEEVLLEVSGQDGTEAFEDVGHSDN----AREALARLEV 74
BLAST of EWM23019.1 vs. NCBI_GenBank
Match: gi|749765292|gb|KII89884.1| (hypothetical protein PLICRDRAFT_159111 [Plicaturopsis crispa FD-325 SS-3]) HSP 1 Score: 57.3806 bits (137), Expect = 5.412e-7 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 0 Query: 30 MFSKLFKSHKKDEPLKPFQ-GDLEGLWYL-EGKAYDLTKFVKMHPGGSDVLLELKGKDGTAAFRDAHGNNPTSTPRKKLGRMEVKGISAE--VLSSRFSGDRDQCP 131 M KL K +DE K + GDL W + + K +DLT+F +HPGGS VL+++ G+D T AF H + P+ + R+++ I+ E LSS G+ Q P Sbjct: 1 MSDKLLKQFSRDEVAKHNKDGDL---WVIVDTKVFDLTRFKNLHPGGSFVLVDIAGQDATEAFYSLHRHEILEKPQYQ--RLQIGTIAEEQSSLSSTLPGELSQVP 101
BLAST of EWM23019.1 vs. NCBI_GenBank
Match: gi|607367739|gb|EZA61871.1| (Cytochrome b5 [Ooceraea biroi]) HSP 1 Score: 53.5286 bits (127), Expect = 5.499e-7 Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0 Query: 60 KAYDLTKFVKMHPGGSDVLLELKGKDGTAAFRDAHGNNPTSTPRKKL 106 K YDLT+FVK HPGG +VLLE+ G DGT F D+ G++ + R+K+ Sbjct: 4 KVYDLTRFVKEHPGGEEVLLEVAGSDGTKCF-DSIGHSEEAKLRRKI 49
BLAST of EWM23019.1 vs. NCBI_GenBank
Match: gi|759035775|ref|XP_011341138.1| (PREDICTED: cytochrome b5 [Ooceraea biroi]) HSP 1 Score: 55.0694 bits (131), Expect = 6.161e-7 Identity = 27/58 (46.55%), Postives = 39/58 (67.24%), Query Frame = 0 Query: 50 DLEGLWY-LEGKAYDLTKFVKMHPGGSDVLLELKGKDGTAAFRDAHGNNPTSTPRKKL 106 ++ LW + K YDLT+FVK HPGG +VLLE+ G DGT F D+ G++ + R+K+ Sbjct: 16 NINDLWVVMNRKVYDLTRFVKEHPGGEEVLLEVAGSDGTKCF-DSIGHSEEAKLRRKI 72 The following BLAST results are available for this feature:
BLAST of EWM23019.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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