EWM23048.1, cds7625 (CDS) Nannochloropsis gaditana

Overview
NameEWM23048.1
Unique Namecds7625
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:464151..464735 -

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Properties
Property NameValue
Protein idEWM23048.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100245g1.7077.mrna
GbkeyCDS
End range.
End range464735
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:464151..464735 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23048.1 vs. NCBI_GenBank
Match: gi|585103858|gb|EWM23048.1| (hypothetical protein Naga_100245g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 370.933 bits (951), Expect = 1.481e-129
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 
Query:    1 SLPPSRPSFLSPPFPFSFCPRLHLSLLPSLPPFFVRSLSSFGRHLTPYSFICDNLVEGADSRDAGPPLRFPLLTPAPPSAPPTPPLRHLLQGLKVAPGRQSKEARRPETGERRDRALMSAVPFSWPLSLLQLANPRLHTPPSFSPLSTRLSPLLGGQAREGARGKRSQSQPSSRTRWGRRAGEESICPVESFLH 194
            SLPPSRPSFLSPPFPFSFCPRLHLSLLPSLPPFFVRSLSSFGRHLTPYSFICDNLVEGADSRDAGPPLRFPLLTPAPPSAPPTPPLRHLLQGLKVAPGRQSKEARRPETGERRDRALMSAVPFSWPLSLLQLANPRLHTPPSFSPLSTRLSPLLGGQAREGARGKRSQSQPSSRTRWGRRAGEESICPVESFLH
Sbjct:    1 SLPPSRPSFLSPPFPFSFCPRLHLSLLPSLPPFFVRSLSSFGRHLTPYSFICDNLVEGADSRDAGPPLRFPLLTPAPPSAPPTPPLRHLLQGLKVAPGRQSKEARRPETGERRDRALMSAVPFSWPLSLLQLANPRLHTPPSFSPLSTRLSPLLGGQAREGARGKRSQSQPSSRTRWGRRAGEESICPVESFLH 194
The following BLAST results are available for this feature:
BLAST of EWM23048.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103858|gb|EWM23048.1|1.481e-129100.00hypothetical protein Naga_100245g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7645rna7645Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications