EWM23057.1, cds7615 (CDS) Nannochloropsis gaditana

Overview
NameEWM23057.1
Unique Namecds7615
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:435735..435814 +
Alignment locationCM002472.1:435902..435968 +
Alignment locationCM002472.1:436200..436301 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23057.1
Productyrinic acid -diamide mitochondrial precursor
Orig transcript idgnl|cribi|Naga_101947g2.8857.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:435735..435814 +
CM002472.1supercontigCM002472.1:435902..435968 +
CM002472.1supercontigCM002472.1:436200..436301 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR029499PduO-typ
IPR016030AdoCbl_synth_CblAdoTrfase-like
Homology
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|585103870|gb|EWM23057.1| (yrinic acid -diamide mitochondrial precursor [Nannochloropsis gaditana])

HSP 1 Score: 171.014 bits (432), Expect = 4.701e-54
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 MDSRLTALKNFILPSGGLCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWVKG 82
            MDSRLTALKNFILPSGGLCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWVKG
Sbjct:    1 MDSRLTALKNFILPSGGLCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWVKG 82          
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|156402373|ref|XP_001639565.1| (predicted protein [Nematostella vectensis] >gi|156226694|gb|EDO47502.1| predicted protein, partial [Nematostella vectensis])

HSP 1 Score: 111.694 bits (278), Expect = 5.500e-30
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    3 SRLTALKNFILPSGGLCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVW 79
            ++L AL NFILPSGG  S+ LH+ART+CRRAER V+PLV S  VDP VG +LNRLSDFLF AAR+AAK+EG EE ++
Sbjct:   46 NQLPALTNFILPSGGKASSLLHVARTVCRRAERRVVPLVTSGSVDPNVGKFLNRLSDFLFTAARFAAKTEGREEKIY 122          
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|301092320|ref|XP_002997018.1| (cobalamin adenosyltransferase, putative [Phytophthora infestans T30-4] >gi|262112171|gb|EEY70223.1| cobalamin adenosyltransferase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 108.612 bits (270), Expect = 5.617e-28
Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    1 MDSRLTALKNFILPSGG-LCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWV 80
            MD++L  +K FILPSGG L S HLH+AR +CRRAERSV+PLV +  VD  V  YLNRLSDFLFV+AR+AA  EG EET WV
Sbjct:  107 MDTKLPLIKCFILPSGGGLASTHLHVARAVCRRAERSVVPLVGAGDVDGVVQRYLNRLSDFLFVSARFAAVKEGKEETKWV 187          
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|1183507478|gb|ORZ30766.1| (Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like protein [Catenaria anguillulae PL171])

HSP 1 Score: 109.768 bits (273), Expect = 6.703e-28
Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    2 DSRLTALKNFILPSGGLCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWVK 81
            D  L  L+NFILPSGG  ++ LHLAR+ICRR ER V+PL+++ +VDPEVG YLNRLSDFLF AAR+AA  EG  E V+ +
Sbjct:  156 DQGLPPLRNFILPSGGKAASTLHLARSICRRTERRVVPLIHAGEVDPEVGKYLNRLSDFLFTAARYAAFKEGKPEQVYKR 235          
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|1214711197|gb|OWZ22225.1| (ATP:cob(I)alamin adenosyltransferase [Phytophthora megakarya])

HSP 1 Score: 108.612 bits (270), Expect = 7.160e-28
Identity = 55/81 (67.90%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    1 MDSRLTALKNFILPSGG-LCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWV 80
            MD+ L  LK FILPSGG L S HLH+AR +CRRAERSV+PLV +  VD  V  YLNRLSDFLFV+AR+AA  EG+EET WV
Sbjct:  121 MDAELPPLKCFILPSGGGLASTHLHVARAVCRRAERSVVPLVAAGDVDGVVQRYLNRLSDFLFVSARFAALKEGNEETKWV 201          
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|1176091643|ref|XP_020616276.1| (cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial-like [Orbicella faveolata] >gi|1176091645|ref|XP_020616277.1| cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial-like [Orbicella faveolata] >gi|1176091647|ref|XP_020616278.1| cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial-like [Orbicella faveolata])

HSP 1 Score: 108.997 bits (271), Expect = 1.019e-27
Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    3 SRLTALKNFILPSGGLCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVW 79
            ++L  L++FILPSGG  SA LH+AR++CRRAER V+PLV S  VDPEVG +LNRLSDFLF+AAR+ AK EG  E ++
Sbjct:  149 NQLPPLRSFILPSGGKSSAMLHVARSVCRRAERRVVPLVQSGSVDPEVGTFLNRLSDFLFIAARFVAKMEGKSEQIY 225          
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|754352993|ref|XP_004342649.2| (cobalamin adenosyltransferase [Capsaspora owczarzaki ATCC 30864] >gi|765557729|gb|KJE97989.1| cobalamin adenosyltransferase [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 109.768 bits (273), Expect = 1.288e-27
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    2 DSRLTALKNFILPSGGLCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVW 79
            DS L  L NFILPSGGL S+HLHLAR+ICRRAER+V+PL+ S   +  VG YLNRLSDFLFVAAR+AA+ +G  E V+
Sbjct:  172 DSLLPRLTNFILPSGGLASSHLHLARSICRRAERAVVPLLQSGAGEKSVGKYLNRLSDFLFVAARFAAQQDGQTEVVF 249          
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|695412839|ref|XP_009525848.1| (hypothetical protein PHYSODRAFT_285842 [Phytophthora sojae] >gi|348676973|gb|EGZ16790.1| hypothetical protein PHYSODRAFT_285842 [Phytophthora sojae])

HSP 1 Score: 108.227 bits (269), Expect = 1.815e-27
Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 0
Query:    1 MDSRLTALKNFILPSGG-LCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWV 80
            MD+ L  LK FILPSGG L S HLH+AR +CRRAERSV+PLV +  VD  V  YLNRLSDFLFV+AR+AA  EG EET WV
Sbjct:  132 MDAELPPLKCFILPSGGGLASTHLHVARAVCRRAERSVVPLVAAGDVDGVVQRYLNRLSDFLFVSARFAALKEGKEETKWV 212          
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|678130800|gb|KFU99986.1| (hypothetical protein N339_04678, partial [Pterocles gutturalis])

HSP 1 Score: 105.531 bits (262), Expect = 2.076e-27
Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 0
Query:    4 RLTALKNFILPSGGLCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWVK 81
            +L  L+ FILPSGG  SA LH +R +CRRAER V+PLV + + DP V  YLNRLSDFLFV AR+AA  EG EET++V+
Sbjct:   66 QLPPLRAFILPSGGKSSAALHFSRAVCRRAERRVVPLVQAGEADPNVAKYLNRLSDFLFVLARYAAMKEGKEETIYVR 143          
BLAST of EWM23057.1 vs. NCBI_GenBank
Match: gi|511000697|gb|EPB82218.1| (ATP:cob(I)alamin adenosyltransferase [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 105.531 bits (262), Expect = 2.303e-27
Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    2 DSRLTALKNFILPSGGLCSAHLHLARTICRRAERSVIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWVK 81
            D +L  L  FILPSGG  SA LH+AR++CRRAER V PLV  +  D  VGI+LNRLSDFLF AARWAA+S+G EE ++ K
Sbjct:   66 DQQLPKLTKFILPSGGKSSASLHVARSVCRRAERRVQPLVRDQLCDNSVGIFLNRLSDFLFNAARWAAQSQGKEEKIYNK 145          
The following BLAST results are available for this feature:
BLAST of EWM23057.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103870|gb|EWM23057.1|4.701e-54100.00yrinic acid -diamide mitochondrial precursor [Nann... [more]
gi|156402373|ref|XP_001639565.1|5.500e-3067.53predicted protein [Nematostella vectensis] >gi|156... [more]
gi|301092320|ref|XP_002997018.1|5.617e-2866.67cobalamin adenosyltransferase, putative [Phytophth... [more]
gi|1183507478|gb|ORZ30766.1|6.703e-2862.50Adenosylcobalamin biosynthesis, ATP:cob(I)alamin a... [more]
gi|1214711197|gb|OWZ22225.1|7.160e-2867.90ATP:cob(I)alamin adenosyltransferase [Phytophthora... [more]
gi|1176091643|ref|XP_020616276.1|1.019e-2763.64cob(I)yrinic acid a,c-diamide adenosyltransferase,... [more]
gi|754352993|ref|XP_004342649.2|1.288e-2766.67cobalamin adenosyltransferase [Capsaspora owczarza... [more]
gi|695412839|ref|XP_009525848.1|1.815e-2767.90hypothetical protein PHYSODRAFT_285842 [Phytophtho... [more]
gi|678130800|gb|KFU99986.1|2.076e-2761.54hypothetical protein N339_04678, partial [Pterocle... [more]
gi|511000697|gb|EPB82218.1|2.303e-2762.50ATP:cob(I)alamin adenosyltransferase [Mucor circin... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7635rna7635Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications